The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP022616	Mycolicibacterium phocaicum strain JCM 15301	5853197	2102279	2145507	5853197	transposase,tRNA,protease	Streptomyces_phage(16.67%)	38	NA	NA
WP_138248403.1|2102279_2104949_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	39.7	1.2e-143
WP_138248402.1|2105072_2105702_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_138248401.1|2105801_2107061_-	enoyl-ACP reductase	NA	NA	NA	NA	NA
WP_138248400.1|2107070_2109050_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_138248399.1|2109090_2109903_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_167526459.1|2110012_2110513_-	transglycosylase family protein	NA	A0A1J0GVU2	Streptomyces_phage	64.6	9.5e-26
WP_138248398.1|2111200_2111779_-	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA	NA
WP_138248397.1|2111789_2112872_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA	NA
WP_138248396.1|2112868_2114803_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA	NA
WP_020102196.1|2115152_2115305_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138248395.1|2115400_2116180_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_138248394.1|2116248_2116611_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	34.7	2.4e-10
WP_138248393.1|2116645_2117848_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_138248392.1|2117868_2119248_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_138248391.1|2119556_2121899_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA	NA
WP_138248390.1|2121886_2122711_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_064859772.1|2122763_2124044_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.8	6.6e-140
WP_138248389.1|2124397_2125051_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_064859774.1|2125096_2126218_-	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_138248388.1|2126237_2126729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138248387.1|2126725_2127940_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138248386.1|2128139_2129483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064859782.1|2129539_2130175_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A248SJ97	Salicola_phage	39.6	2.0e-28
WP_167526403.1|2130186_2130789_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	49.1	1.5e-41
WP_138248385.1|2130966_2132472_-	trigger factor	NA	NA	NA	NA	NA
WP_138248588.1|2133206_2134367_+	alkane 1-monooxygenase	NA	NA	NA	NA	NA
WP_167526404.1|2134363_2134771_-	DUF2628 domain-containing protein	NA	NA	NA	NA	NA
WP_138248384.1|2134824_2135385_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138248383.1|2135562_2136198_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_138248382.1|2136190_2137723_-	nicotinate phosphoribosyltransferase	NA	A0A160DEX8	Gordonia_phage	59.5	5.7e-146
WP_163692700.1|2137737_2138589_-	ribose-phosphate pyrophosphokinase	NA	A0A291I9X9	Mycobacterium_phage	40.1	5.8e-31
WP_138248380.1|2138661_2139516_+	DUF1542 domain-containing protein	NA	NA	NA	NA	NA
WP_163692701.1|2139562_2139958_+|transposase	transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	40.9	1.2e-15
WP_163692703.1|2139986_2140325_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_053855802.1|2140315_2141653_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	36.7	8.2e-32
WP_138248377.1|2141949_2142744_-	Fpg/Nei family DNA glycosylase	NA	A0A1V0CNR6	Kaumoebavirus	24.1	3.2e-07
WP_138248376.1|2142759_2143239_-	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
WP_138248375.1|2143284_2145507_-	protein kinase	NA	A0A2H4UVE2	Bodo_saltans_virus	28.2	7.3e-17
>prophage 2
NZ_AP022616	Mycolicibacterium phocaicum strain JCM 15301	5853197	3770251	3845581	5853197	integrase,transposase,tRNA	Mycobacterium_phage(23.08%)	60	3802809:3802828	3824538:3824557
WP_138251208.1|3770251_3771799_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_138251321.1|3772031_3772505_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_061006394.1|3772616_3773810_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_133428075.1|3773968_3774301_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	54.9	7.0e-25
WP_061006396.1|3774341_3775280_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	49.8	3.6e-74
WP_138251320.1|3775402_3776167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138251319.1|3776212_3776764_-	RNA polymerase sigma factor SigM	NA	NA	NA	NA	NA
WP_138251327.1|3776860_3780139_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_138251328.1|3780234_3782622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138251318.1|3782633_3783419_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_138251326.1|3783593_3785045_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A249XS88	Mycobacterium_phage	38.1	4.0e-64
WP_061006400.1|3785063_3785546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138251317.1|3785542_3786325_-	TIGR03084 family protein	NA	NA	NA	NA	NA
WP_131808642.1|3786984_3787542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138251316.1|3787538_3788810_-	MFS transporter	NA	NA	NA	NA	NA
WP_138251315.1|3788937_3789549_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_133428083.1|3789559_3789916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138251314.1|3789965_3790973_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138251325.1|3791198_3794051_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	45.3	1.9e-211
WP_138251313.1|3794114_3794780_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_061006195.1|3794834_3796175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061006194.1|3796185_3796650_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_138251312.1|3796690_3797428_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.2	4.4e-19
WP_163692860.1|3797424_3799185_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_138251311.1|3799263_3800046_-	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_138251310.1|3800055_3800958_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_138251309.1|3800991_3802563_-	alkyl hydroperoxide reductase subunit F	NA	G3MA85	Bacillus_virus	33.9	6.9e-38
WP_061006190.1|3802692_3803256_-	alkyl hydroperoxide reductase subunit C	NA	NA	NA	NA	NA
3802809:3802828	attL	GGACCAGTTCGGCGGCGTTG	NA	NA	NA	NA
WP_138251308.1|3803441_3804530_-	inositol-3-phosphate synthase	NA	A0A0H4IPK5	Stenotrophomonas_phage	40.3	5.2e-69
WP_064857478.1|3804584_3805157_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_082934498.1|3805323_3806178_-	DUF1707 domain-containing protein	NA	NA	NA	NA	NA
WP_020099850.1|3806322_3806754_+	DUF5318 domain-containing protein	NA	NA	NA	NA	NA
WP_163692862.1|3806758_3809227_+	penicillin-binding protein	NA	NA	NA	NA	NA
WP_138251306.1|3809223_3810873_+	DUF2029 domain-containing protein	NA	NA	NA	NA	NA
WP_138251305.1|3810914_3811379_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_138251304.1|3811570_3812161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138251303.1|3812190_3812838_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138251302.1|3812991_3813627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020099843.1|3813820_3814111_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_138251301.1|3814192_3814702_+	single-stranded DNA-binding protein	NA	A0A2H4JEL4	uncultured_Caudovirales_phage	87.7	3.8e-54
WP_020099841.1|3814749_3815004_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_138251300.1|3815019_3815475_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_138251323.1|3816015_3819045_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	29.4	2.3e-58
WP_138251322.1|3819290_3819965_+|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
WP_138251299.1|3819961_3822115_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_138251298.1|3822111_3823236_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_138251297.1|3823242_3825579_+	TniQ family protein	NA	NA	NA	NA	NA
3824538:3824557	attR	CAACGCCGCCGAACTGGTCC	NA	NA	NA	NA
WP_138251296.1|3825611_3828281_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_061003426.1|3828388_3829795_-|transposase	IS1380 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	41.7	1.4e-79
WP_138251295.1|3830391_3830619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138251294.1|3830682_3831396_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_138251293.1|3831644_3831851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163692864.1|3832048_3832567_+	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_138251291.1|3832566_3834666_+	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_138251290.1|3834742_3836479_+	SAM-dependent DNA methyltransferase	NA	A0A220A2U4	Liberibacter_phage	33.2	1.3e-32
WP_138251289.1|3836475_3837777_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_138251288.1|3837780_3840936_+	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_163692866.1|3842510_3843824_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	91.3	2.3e-228
WP_138251361.1|3843916_3845074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163692868.1|3845206_3845581_+|transposase	transposase	transposase	A0A1B3AZF8	Gordonia_phage	49.1	2.4e-18
>prophage 3
NZ_AP022616	Mycolicibacterium phocaicum strain JCM 15301	5853197	5290493	5324182	5853197	integrase,transposase	Mycobacterium_phage(40.0%)	29	5312632:5312691	5324156:5325637
WP_064860310.1|5290493_5291468_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	49.4	2.7e-56
WP_138251341.1|5294165_5295401_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	53.4	3.1e-110
WP_138251340.1|5295845_5296658_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_138251339.1|5296654_5297509_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_138251338.1|5297474_5298869_+	MCE family protein	NA	NA	NA	NA	NA
WP_138251337.1|5298911_5299940_+	virulence factor Mce family protein	NA	NA	NA	NA	NA
WP_138251336.1|5299936_5301292_+	MCE family protein	NA	NA	NA	NA	NA
WP_138251335.1|5301288_5302617_+	MCE family protein	NA	NA	NA	NA	NA
WP_138251334.1|5302613_5303756_+	virulence factor Mce family protein	NA	NA	NA	NA	NA
WP_138251333.1|5303759_5305223_+	MCE family protein	NA	NA	NA	NA	NA
WP_138251332.1|5305212_5305827_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138251331.1|5305823_5306486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138251330.1|5306485_5306881_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_167526436.1|5306881_5307367_+	CAP domain-containing protein	NA	NA	NA	NA	NA
WP_138251329.1|5307558_5308458_+	esterase family protein	NA	A0A2I6AZH7	Macacine_betaherpesvirus	39.4	3.5e-47
WP_036429724.1|5310137_5311229_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_138251366.1|5311599_5311806_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138251365.1|5311796_5311991_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_138251364.1|5312000_5312405_+	hypothetical protein	NA	NA	NA	NA	NA
5312632:5312691	attL	GAGCAATTGTCAATACCTGTGGATCGGGGTGTTTCAGGCGACCTCCGTTTCGGTGTGTTG	NA	NA	NA	NA
WP_067990476.1|5312664_5313978_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	91.3	2.3e-228
WP_138251344.1|5314118_5315102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138251345.1|5315181_5316819_-|integrase	integrase	integrase	NA	NA	NA	NA
WP_138251346.1|5316957_5318088_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_163693016.1|5318084_5318447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138251348.1|5318542_5319070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138251349.1|5319554_5320148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138251350.1|5320140_5321550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163693018.1|5322046_5322433_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_067990476.1|5322868_5324182_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	91.3	2.3e-228
5324156:5325637	attR	CAACACACCGAAACGGAGGTCGCCTGAAACACCCCGATCCACAGGTATTGACAATTGCTCCTCAGCCGCACCGGTCGGACGGGACTGGGCTTGAAGGTTCGCCAGGCGCCGCTGGGCGGTCGGGTCCTGAGCCAGGCGCGGATTGGTCTCCATGTTCTTTTGCAGCCAGTCCTTGTAATCGTCCTCATACATGCTGGTGGCGCTGCGCGGGTTCTCGAACTGGTGAGATCGGTTCGGACCGCGCGCCTCGAGCTGGTAATGGCTCGGATCATTGGACCATTCGAGCTTCTCCCGACGCGACAGCCCGTACTGCGTGGCCATGTCGTTGGTGGTCTTCTCTTCAAAACCCGGCTTATGCCCGATATCCGGCGTGCCTTTGATGGGTTCGTACGTGTTCGGGTCCAGTGGAAGCCCGCTCTCGGGATCACGTTCGGCAGCGGCATGGATGTCTTGTTTGGTTCCCTGCCGTAGCGGCGCCCGGCTGGTGATGTTGGTAGTGAGCCGCTGATCAGCAGCAGAGGGCGGCAACGCATGACTGAGCTCCCCACCGGGAATCACATCCCCAGCCGGCGGCCCATTCGGTGCCTTGGGCGTCTCGACGCCGGGCAGCGGCGGTTTCCCGGCGGTGCCGGCGGCGGCGATCTCCTCGCGTACCTGTGCTGGGTTGGGGACGGCCTTGGCGGCGTCAATGATCTCGTCGGTGTGCGTAACGACCTGTTTGGCGGCCAGTTCGGCGCCTTCTTCGGCGATCTTCTTGGCCGCCCCGGTGGGGGTGAACATGGTCGCCGCGTTGGCCACCGTCGACATCGCCCCGAGGGTTTGGTTGTCCGGCATGGCTTCTGAAGCGATCTGCAACCCGGCTGCGCCAACGTTGGCGACCGCCGCAGCGATCGCGGCGGCGCCGGCTGGCCCACCCACACCGGTCACTGCGACCGCGGCCCCCGCGACAATGACCGCTGTTTCCACCGGGTTGTTCTTCACGAACGTGAATACCGCTTTGCCGCCCGACGCCGTCGCTGAGGCCGCACTCGACACCGCGCTGCCGACCGCGTTCGCTGCGCTGGACACGGTGCTGGTGATCGAGTCGAACAACCCCGCCGGTAGCGGTCCGCCGCCGGAGCCACCGACATGCAGCGGCGGATCCACGTACACCGGCCACTTGGTGTCTGGGCGTGGGTCGATGACCTCAGAGAGCTGATACAAACCCGGACGCAGCTGACGCGCCACGTACGATGACGGCACCAATTTGCCTGCGGCATCGCGGGTTTCGGCCGGGGCGAACATGCCGACGGTTTCCGCGGCCGGTGTGGCGCGGTTGATGGTCAAAAATCCGTTGGTGTGGGCCAACATCACGGTGTCGACCGGCGTGCGCACAAAGGTGGTGACCATGCGTACGCCGGTCGCGCTGGCGATGCGGGCAACCGTGCGCGTCCCAGTACCGGTGTTCTCAGCCAAGAAATCAAACCCTGCACCACGATCGGG	NA	NA	NA	NA
