The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP022614	Mycobacterium parmense strain JCM 14742	5952912	5058706	5110212	5952912	integrase,transposase	Corynebacterium_phage(25.0%)	35	5065837:5065853	5073483:5073499
WP_101930856.1|5058706_5059339_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_007172184.1|5059515_5059986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007172185.1|5059982_5062184_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007172186.1|5062180_5063905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162839945.1|5063904_5065374_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
5065837:5065853	attL	GGGCGGCGGCCGGTGTC	NA	NA	NA	NA
WP_085270300.1|5069151_5070261_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A220NQQ9	Corynebacterium_phage	29.9	2.3e-08
WP_163670906.1|5072111_5072414_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163670907.1|5072467_5073232_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0P0I3D2	Lactobacillus_phage	27.8	1.8e-07
WP_163670909.1|5073796_5075410_+	hypothetical protein	NA	NA	NA	NA	NA
5073483:5073499	attR	GGGCGGCGGCCGGTGTC	NA	NA	NA	NA
WP_085271075.1|5075671_5076166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007172194.1|5076781_5077222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007172195.1|5077447_5077774_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_007172196.1|5078622_5079243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040624304.1|5079243_5080278_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.5	7.0e-31
WP_033717415.1|5081506_5082106_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007172200.1|5082534_5083146_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007172201.1|5083221_5083668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033717417.1|5083782_5084679_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_040624282.1|5084675_5087621_-	RND family transporter	NA	NA	NA	NA	NA
WP_007172204.1|5088566_5089208_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007172205.1|5089456_5089621_+	DUF5078 domain-containing protein	NA	NA	NA	NA	NA
WP_007172562.1|5089660_5092594_-	MMPL family transporter	NA	NA	NA	NA	NA
WP_007172563.1|5092590_5093010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033721600.1|5093617_5094628_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_047324229.1|5098660_5099803_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_007172209.1|5099879_5100536_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_007172211.1|5103515_5103968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007172212.1|5103982_5104495_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_007172213.1|5104491_5104827_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033721564.1|5104813_5106205_-	DUF1446 domain-containing protein	NA	NA	NA	NA	NA
WP_007172215.1|5106201_5106375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007172216.1|5106831_5107986_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_033721567.1|5108026_5109214_+	thiolase family protein	NA	NA	NA	NA	NA
WP_033721568.1|5109225_5109615_+	Zn-ribbon domain-containing OB-fold protein	NA	NA	NA	NA	NA
WP_157679851.1|5109666_5110212_+|transposase	transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	61.8	6.7e-41
>prophage 2
NZ_AP022614	Mycobacterium parmense strain JCM 14742	5952912	5192721	5295930	5952912	integrase,transposase	Staphylococcus_phage(46.15%)	76	5217972:5217995	5294638:5296055
WP_101930934.1|5192721_5193975_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.1	6.1e-29
WP_042909891.1|5194406_5195642_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.2	1.0e-84
WP_007168379.1|5197101_5197746_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007168380.1|5197795_5198236_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_007168381.1|5198288_5199185_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_019732564.1|5199232_5199448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007168383.1|5199977_5201426_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.6	4.4e-55
WP_007168385.1|5202172_5202763_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007168386.1|5202850_5204152_+	cytochrome P450	NA	NA	NA	NA	NA
WP_074021704.1|5204163_5204355_+	ferredoxin	NA	NA	NA	NA	NA
WP_033717470.1|5204487_5205504_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_033712834.1|5205696_5206566_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_057969459.1|5206642_5207347_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_074021707.1|5207373_5207973_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007168393.1|5208176_5209013_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_007168394.1|5209031_5209955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007168395.1|5209951_5211598_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA	NA
WP_007168396.1|5211672_5213196_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_007168397.1|5213192_5214161_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_075630242.1|5214338_5215796_+	cytochrome P450	NA	NA	NA	NA	NA
WP_085271655.1|5215792_5216449_+	transglutaminase domain-containing protein	NA	NA	NA	NA	NA
WP_085981616.1|5216481_5218098_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	24.5	1.6e-26
5217972:5217995	attL	GTGGTGGATCCCGGAGCGCTGGGC	NA	NA	NA	NA
WP_033712837.1|5218146_5219289_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
5217972:5217995	attL	GTGGTGGATCCCGGAGCGCTGGGC	NA	NA	NA	NA
WP_033711234.1|5219675_5220002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007168405.1|5223139_5224012_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_007168406.1|5224164_5224440_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_007168407.1|5224439_5224832_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_007168413.1|5229897_5230851_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_007168414.1|5230847_5232425_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_065517439.1|5232446_5232992_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_080576328.1|5232978_5233353_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_074021308.1|5233383_5234205_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_007168420.1|5234587_5235331_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_065517438.1|5235428_5236277_+	CoA transferase	NA	NA	NA	NA	NA
WP_019732177.1|5236273_5237449_+	thiolase family protein	NA	NA	NA	NA	NA
WP_007168424.1|5237458_5239135_+	long-chain-fatty-acid--CoA ligase	NA	NA	NA	NA	NA
WP_007168425.1|5239131_5239908_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_007168426.1|5239915_5241064_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_007168427.1|5241089_5241848_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_046184758.1|5242835_5244188_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.6	6.3e-32
WP_007168431.1|5244815_5245142_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042909891.1|5247724_5248960_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.2	1.0e-84
WP_007168435.1|5249811_5250330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101930905.1|5250398_5251493_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_007168437.1|5252884_5254051_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2K9VF00	Mycobacterium_phage	29.1	1.6e-07
WP_163670911.1|5256580_5257381_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_163670913.1|5257289_5257643_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_163670915.1|5258232_5258895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163670917.1|5258891_5260115_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJP1	Virus_Rctr41k	33.3	4.1e-06
WP_085271075.1|5260207_5260702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007168443.1|5261308_5261740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007168449.1|5264380_5266009_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	25.3	6.7e-28
5265883:5265906	attR	GTGGTGGATCCCGGAGCGCTGGGC	NA	NA	NA	NA
WP_007168450.1|5266061_5267003_+	R2-like ligand-binding oxidase	NA	NA	NA	NA	NA
5265883:5265906	attR	GTGGTGGATCCCGGAGCGCTGGGC	NA	NA	NA	NA
WP_007168451.1|5267209_5267635_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_101930904.1|5267652_5268777_+	thiolase family protein	NA	NA	NA	NA	NA
WP_007168453.1|5268843_5269737_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_007168454.1|5269767_5271387_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	28.1	1.1e-30
WP_050790029.1|5271634_5272756_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA	NA
WP_007168458.1|5274430_5275648_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_074021181.1|5276174_5276672_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_007168461.1|5276779_5278186_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_007168462.1|5278232_5278379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007168467.1|5280508_5280835_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_007168468.1|5281183_5281462_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_154074411.1|5281458_5281614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007168470.1|5281689_5282139_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_040622630.1|5283399_5284482_+	dihydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_136244823.1|5286907_5287189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167310147.1|5287318_5287507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157137495.1|5288105_5288552_-|transposase	transposase	transposase	A0A220NQR7	Corynebacterium_phage	40.8	2.9e-10
WP_075362207.1|5289177_5289489_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_085272092.1|5289522_5290758_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.1	1.0e-28
WP_007168486.1|5293159_5293501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007168487.1|5293521_5293929_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_033711258.1|5293932_5294205_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_042909891.1|5294694_5295930_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.2	1.0e-84
5294638:5296055	attR	GGTCAAGTCCAGGGACGTGGTGTACGACGTCGTCGTGTGATTCTTCGACTTGGTGGTTTAGGCGGTCAGTGCCGCCGGGGTGTCCTCCTGTTCTGTTGATGGCGTGTGGTCGGCGCGGGATTTGCTGAGGACGTCGAGGCCGAGGTAGCGGCGGGATTCGGCCCATTCGTCGTGTTGTTCGGCCAGCACCGCGCCGACGAGGCGGATTAGGGCGTTGCGGTCGGGGAAGATTCCGACGACGTCGGTGCGCCGGCGGATTTCCTTGTTGAGTCGTTCTTGTGGGTTGTTGGACCAGATCTGCCGCCAAATTTGTTTGGGGAAGGCGGTGAAGGCGAGCAGGTCGGCGCGGGCGTCTTCGAGGTGGTCGGCGACCTTGGGGAGCTTGTCGGCCAGTGCGTCGATGATGCGGTCATATTGGGCTGCAACGGAACCGGCGTCAGGTTGATCGAAGACCGAATGCAGTAGTGTGCGTACCCACGGCCACGATGATTTCGGAGTGATGGCCATCAGGTTGGTGGCGTAGTGGGTGCGACACCGTTGCCACGATGCCCCAGGCAGGGTGGCGCCGATCGCGGCCACCAGACCGGCGTGGGCGTCGGAAGTGACCAGACGGACCCCTGATAGGCCGCGGGCGGTCAGCGACCGCAGGAAGGTCAGCCAGCCGGCCCCGTCCTCGGCGGTGGTGACGTCGATGCCCAGGATTTCGCGGTAGCCCTCGGCGTTGACCCCGGTGGCGATCAGCGCGTGCACGTTGACCACCCGGCCTGCTTCGCGAACCTTGAGCACCAGGGCGTCAGCAGCCATGAACGTGTACGGGCCTGCATCCAGTGGCCGGGTCCGGAACGCCTCGACCGCGGCGTCGAGCTCTTTGGCCATCACGCTGACCTGGGACTTCGACAAGCTGGTGATGCCCAGAGTCTCGACGAGTTTGTCCATCCGCCGCGTCGAAACGCCCAGCAGGTAGCAGGTAGCCACCACCGTGGTCAGGGCCCGCTCGGCGCGTTTGCGCCGTTCCAGCAGCCAGTCCGGGAAGTACGAACCTTGCCTTAGCTTGGGAATCGCCAGATCCAATGTGCCTGCGCGGGTGTCAAACTCGCGGTGCCGATACCCGTTGCGGGAATTGGTGCGCTCGCTGCTGCGCTGGCCGTAGCCGGCACCGCACACCGCGTCGGCTTCGGCGCCCATCAGGGCGTGAATGAAGGCGGCCAACAACTCGCGCAGCACATCAGGGTGCGTGGTGGTGAGTCGTTCGGCCAGCACGGCAGACAGGTCGATATCGTGGGCAATGGTCATCGCGTTGATTCCTTTGCTCGAGTGACTTTGGTCGGTCCCTCGAAGAATCACGCGATGACCTTCATTCATCCGGCTACGACACGCCGGTCATCACCGGCTCGTACACCACTCTGCTGGACGCAACT	NA	NA	NA	NA
