The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP022606	Mycobacterium branderi strain JCM 12687	5115366	1231	13550	5115366		Mycobacterium_phage(83.33%)	24	NA	NA
WP_003921285.1|1231_1444_+	type II toxin-antitoxin system HicA family toxin	NA	Q854W6	Mycobacterium_virus	56.0	6.0e-14
WP_003921287.1|1440_1821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083129693.1|1908_2466_-	hypothetical protein	NA	G1JX82	Mycobacterium_phage	36.5	9.0e-17
WP_003921289.1|2462_2801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163659457.1|2797_3634_-	hypothetical protein	NA	A0A076GDX0	Mycobacterium_phage	65.0	4.2e-26
WP_003921291.1|3630_3915_-	WhiB family transcriptional regulator	NA	NA	NA	NA	NA
WP_157139271.1|3911_4067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169717238.1|4063_5050_-	hypothetical protein	NA	A0A1B3B1T0	Gordonia_phage	37.1	2.1e-45
WP_083129696.1|5232_5835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129697.1|5834_6053_-	hypothetical protein	NA	A0A2P1CGB9	Mycobacterium_phage	64.9	1.6e-14
WP_163659459.1|6049_6232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139799360.1|6400_6643_-	DUF3310 domain-containing protein	NA	B9W1H9	Mycobacterium_phage	62.5	4.6e-26
WP_163659461.1|6756_7581_-	DUF2303 family protein	NA	A0A076G8A4	Mycobacterium_phage	64.3	3.6e-78
WP_139799291.1|7591_7933_-	hypothetical protein	NA	A0A076G9A8	Mycobacterium_phage	52.6	1.7e-21
WP_163659752.1|7925_9038_-	recombinase RecT	NA	W8EAF4	Mycobacterium_phage	37.5	3.3e-50
WP_083129702.1|9947_10229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129703.1|10225_10480_-	hypothetical protein	NA	A0A2P1N381	Mycobacterium_phage	49.4	7.7e-08
WP_163659463.1|10572_11076_-	HNH endonuclease	NA	A0A076YKT4	Mycobacterium_phage	51.9	6.0e-36
WP_163659465.1|11072_11261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129705.1|11319_11733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163659467.1|11729_11870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129706.1|11866_12178_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083130447.1|12421_12646_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_169717239.1|12755_13550_-	phage antirepressor KilAC domain-containing protein	NA	H6U5J3	Mycobacterium_phage	51.2	1.3e-53
>prophage 2
NZ_AP022606	Mycobacterium branderi strain JCM 12687	5115366	23804	60542	5115366	tail	Mycobacterium_phage(69.23%)	50	NA	NA
WP_083129671.1|23804_24233_-	hypothetical protein	NA	R4JHR0	Mycobacterium_phage	43.6	1.6e-21
WP_163659482.1|24304_25429_-	hypothetical protein	NA	A0A088FPR6	Mycobacterium_phage	65.3	5.5e-05
WP_083129673.1|25425_27792_-	hypothetical protein	NA	A0A222ZL91	Mycobacterium_phage	30.9	1.2e-65
WP_139799286.1|27788_28892_-	hypothetical protein	NA	A0A076YQB1	Mycobacterium_phage	30.7	4.1e-21
WP_083129674.1|28906_29431_-	hypothetical protein	NA	Q854M8	Mycobacterium_phage	42.7	3.7e-36
WP_003921259.1|30652_31741_-	hypothetical protein	NA	R4TJP5	Mycobacterium_phage	28.2	1.2e-44
WP_083129678.1|31737_36516_-|tail	phage tail tape measure protein	tail	A0A2H4PBL6	Mycobacterium_phage	27.8	2.0e-51
WP_083129679.1|36519_36909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099539500.1|36964_37444_-	hypothetical protein	NA	A0A0A1ENX3	Mycobacterium_phage	48.1	8.2e-27
WP_083129681.1|37532_38573_-	hypothetical protein	NA	A0A249XP38	Mycobacterium_phage	31.1	5.6e-28
WP_083129682.1|38647_39067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139799288.1|39063_39618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129684.1|39614_40022_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129685.1|40014_40497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129686.1|40498_40825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129687.1|40824_41862_-	hypothetical protein	NA	A0A1D8EWX7	Mycobacterium_phage	46.1	7.7e-70
WP_083129688.1|41971_42370_-	DUF2190 family protein	NA	A0A142K8P7	Gordonia_phage	38.2	3.1e-11
WP_083129689.1|42371_43703_-	hypothetical protein	NA	A0A142K9Z2	Gordonia_phage	34.3	2.5e-49
WP_083129690.1|43696_45256_-	hypothetical protein	NA	A0A160DCL3	Gordonia_phage	56.0	5.6e-141
WP_163659484.1|45283_46804_-	hypothetical protein	NA	A0A142KC08	Gordonia_phage	35.8	9.5e-69
WP_003921280.1|47173_47500_-	hypothetical protein	NA	A0A1C9EHT2	Gordonia_phage	54.8	9.9e-32
WP_003921282.1|47507_47762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139799290.1|47758_48133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003921285.1|48224_48437_+	type II toxin-antitoxin system HicA family toxin	NA	Q854W6	Mycobacterium_virus	56.0	6.0e-14
WP_003921287.1|48433_48814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163659486.1|48901_49264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163659488.1|49185_49458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003921289.1|49454_49793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129694.1|49789_50629_-	hypothetical protein	NA	A0A076GDX0	Mycobacterium_phage	65.0	4.2e-26
WP_003921291.1|50625_50910_-	WhiB family transcriptional regulator	NA	NA	NA	NA	NA
WP_157139271.1|50906_51062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169717227.1|52044_52218_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129696.1|52217_52820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129697.1|52819_53038_-	hypothetical protein	NA	A0A2P1CGB9	Mycobacterium_phage	64.9	1.6e-14
WP_163659459.1|53034_53217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163659490.1|53213_53390_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139799360.1|53386_53629_-	DUF3310 domain-containing protein	NA	B9W1H9	Mycobacterium_phage	62.5	4.6e-26
WP_163659461.1|53742_54567_-	DUF2303 family protein	NA	A0A076G8A4	Mycobacterium_phage	64.3	3.6e-78
WP_139799291.1|54577_54919_-	hypothetical protein	NA	A0A076G9A8	Mycobacterium_phage	52.6	1.7e-21
WP_083129700.1|54911_56048_-	recombinase RecT	NA	A0A160DCX2	Gordonia_phage	43.0	1.1e-50
WP_083129702.1|56929_57211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129703.1|57207_57462_-	hypothetical protein	NA	A0A2P1N381	Mycobacterium_phage	49.4	7.7e-08
WP_163659463.1|57554_58058_-	HNH endonuclease	NA	A0A076YKT4	Mycobacterium_phage	51.9	6.0e-36
WP_163659465.1|58054_58243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163659492.1|58249_58714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163659467.1|58710_58851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083129706.1|58847_59159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083130447.1|59402_59627_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_163659494.1|59736_59991_-	phage antirepressor KilAC domain-containing protein	NA	A0A0F6WE01	Mycobacterium_phage	79.2	4.4e-27
WP_163659496.1|59945_60542_-	hypothetical protein	NA	A0A142K8T5	Gordonia_phage	56.1	3.9e-42
>prophage 3
NZ_AP022606	Mycobacterium branderi strain JCM 12687	5115366	4542469	4550696	5115366		Mycobacterium_phage(33.33%)	7	NA	NA
WP_083133431.1|4542469_4543354_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	33.5	7.9e-07
WP_083133430.1|4543372_4544113_-	hypothetical protein	NA	A0A068F4L5	Mycobacterium_phage	45.8	5.5e-46
WP_083133429.1|4544142_4544451_-	hypothetical protein	NA	A0A023W6B1	Mycobacterium_phage	55.6	1.9e-16
WP_083133505.1|4544870_4547228_-	RelA/SpoT family protein	NA	A0A2I2L310	Orpheovirus	37.9	1.1e-12
WP_083133504.1|4547321_4547837_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	31.6	2.3e-11
WP_083133428.1|4547836_4549480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083133427.1|4549484_4550696_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	28.1	1.5e-21
>prophage 4
NZ_AP022606	Mycobacterium branderi strain JCM 12687	5115366	5030028	5039951	5115366		Mycobacterium_phage(28.57%)	10	NA	NA
WP_045383513.1|5030028_5030991_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	85.6	4.5e-157
WP_083129611.1|5031114_5032632_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_083130438.1|5032675_5033410_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_083129612.1|5033528_5035697_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.0	1.1e-208
WP_083129613.1|5035663_5036113_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A220BYR7	Staphylococcus_phage	28.0	3.4e-06
WP_083129614.1|5036122_5036362_-	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	64.0	1.5e-21
WP_083130440.1|5036775_5037303_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	33.6	2.1e-07
WP_083130439.1|5037411_5038011_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_083129615.1|5038007_5039036_+	DNA polymerase IV	NA	I6RSM4	Salmonella_phage	26.3	1.2e-14
WP_083129616.1|5039093_5039951_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	29.5	8.4e-06
>prophage 1
NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	864257	226682	235988	864257	transposase	Mycobacterium_phage(66.67%)	9	NA	NA
WP_083134618.1|226682_230843_-	type VII secretion protein EccCa	NA	V5UPA0	Mycobacterium_phage	25.5	3.4e-84
WP_139799752.1|230945_231161_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA	NA
WP_083134619.1|231288_231507_+	type II toxin-antitoxin system HicA family toxin	NA	G8I6R4	Mycobacterium_virus	71.4	3.9e-24
WP_083134647.1|231509_231929_+	hypothetical protein	NA	A0A142K826	Mycobacterium_phage	67.9	6.9e-46
WP_163659878.1|232101_232392_+|transposase	IS200/IS605 family transposase	transposase	A0A1L2BWN1	Bacteriophage	40.0	1.8e-13
WP_083134621.1|232637_233012_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_139799753.1|233223_234543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083134648.1|235025_235271_+	hypothetical protein	NA	A0A0A7S2B5	Mycobacterium_phage	64.6	1.1e-14
WP_083134623.1|235295_235988_+	hypothetical protein	NA	A0A0A7RXU2	Mycobacterium_phage	47.8	1.8e-54
