The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP022605	Mycolicibacterium doricum strain JCM 12405	4029398	175217	182238	4029398	integrase	Gordonia_phage(42.86%)	11	169937:169979	181535:181577
169937:169979	attL	GAGCCGATGACGGGAATCGAACCCGCGTATTCAGCTTGGGAAG	NA	NA	NA	NA
WP_085189408.1|175217_175694_-	hypothetical protein	NA	A0A142K9Z2	Gordonia_phage	36.8	2.6e-12
WP_085189410.1|175708_176584_-	hypothetical protein	NA	A0A142K9Z4	Gordonia_phage	39.5	1.6e-52
WP_085189412.1|176600_176984_-	DUF2190 family protein	NA	W8EH90	Mycobacterium_phage	62.7	1.9e-26
WP_085189649.1|176985_177570_-	hypothetical protein	NA	A0A142K9Z2	Gordonia_phage	43.2	8.2e-29
WP_085189414.1|177575_177986_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_085189416.1|177982_178348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085189418.1|178937_179354_-	hypothetical protein	NA	A0A0C5AIA5	Mycobacterium_phage	51.5	1.4e-30
WP_085189420.1|179418_179574_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_085189422.1|179702_180305_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085189424.1|180297_181482_+|integrase	site-specific integrase	integrase	G9FGY1	Rhodococcus_phage	46.1	1.3e-86
WP_085189651.1|181665_182238_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	74.7	4.2e-78
181535:181577	attR	GAGCCGATGACGGGAATCGAACCCGCGTATTCAGCTTGGGAAG	NA	NA	NA	NA
>prophage 2
NZ_AP022605	Mycolicibacterium doricum strain JCM 12405	4029398	552786	566944	4029398	integrase,transposase	Mycobacterium_phage(100.0%)	12	554672:554686	572065:572079
WP_085192575.1|552786_554094_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	87.4	1.2e-224
554672:554686	attL	ACACCCCGGCGATGG	NA	NA	NA	NA
WP_085192578.1|555278_556211_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_133055577.1|556962_557409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_133055578.1|557913_559314_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_133055579.1|559492_560632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163784060.1|560628_561726_+	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA	NA
WP_085192581.1|561722_562715_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_163784062.1|564509_564725_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_163784064.1|564679_565399_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_163784066.1|565401_565698_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_099050097.1|565749_566310_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_099050096.1|566209_566944_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
572065:572079	attR	CCATCGCCGGGGTGT	NA	NA	NA	NA
>prophage 3
NZ_AP022605	Mycolicibacterium doricum strain JCM 12405	4029398	974923	1016719	4029398	transposase,integrase,protease	Bacillus_phage(50.0%)	32	993535:993551	1022417:1022433
WP_085190039.1|974923_975412_+|protease	hydrogenase maturation protease	protease	NA	NA	NA	NA
WP_133055529.1|975404_975623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085190035.1|975712_975964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085190288.1|975972_977046_-	hydrogenase expression/formation protein HypE	NA	NA	NA	NA	NA
WP_085190034.1|977038_978148_-	hydrogenase formation protein HypD	NA	NA	NA	NA	NA
WP_085190032.1|978144_978429_-	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA	NA
WP_085190286.1|978371_980732_-	carbamoyltransferase HypF	NA	NA	NA	NA	NA
WP_085190285.1|980895_981258_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA	NA
WP_085190030.1|981267_982059_+	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA	NA
WP_085190028.1|982165_982414_-	mycoredoxin	NA	NA	NA	NA	NA
WP_085190026.1|982486_984610_+	ATP-dependent DNA helicase UvrD2	NA	A7KV33	Bacillus_phage	26.4	9.3e-46
WP_085190024.1|985109_985391_+	WhiB family transcriptional regulator	NA	NA	NA	NA	NA
WP_085190023.1|985412_986747_-	AarF/ABC1/UbiB kinase family protein	NA	A0A0R6PKQ6	Moraxella_phage	27.1	1.4e-20
WP_085190283.1|986792_987635_-	cyclodehydratase	NA	NA	NA	NA	NA
WP_085190021.1|987723_989139_-|protease	zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_085190280.1|989229_990258_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_085190019.1|990342_993354_+	UPF0182 family protein	NA	NA	NA	NA	NA
993535:993551	attL	AAAACGGCCCCCGGAGA	NA	NA	NA	NA
WP_085190017.1|994112_996563_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_085190015.1|996660_996984_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_085190014.1|996986_997337_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_109749304.1|997372_998716_-|integrase	site-specific integrase	integrase	A0A1B0T6A8	Bacillus_phage	30.7	4.1e-47
WP_082967898.1|998712_998898_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_099050197.1|1000694_1001964_+|transposase	IS3 family transposase	transposase	A0A0N7C1X7	Escherichia_phage	39.9	9.2e-49
WP_085190276.1|1002028_1002454_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_085190012.1|1004313_1005390_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_085190010.1|1005720_1006521_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_163784088.1|1006727_1007219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055546.1|1009243_1010167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055547.1|1010129_1010648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085191698.1|1011288_1013619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085191706.1|1014544_1015201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085191704.1|1015249_1016719_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
1022417:1022433	attR	TCTCCGGGGGCCGTTTT	NA	NA	NA	NA
