assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010727725.1_ASM1072772v1	NZ_AP022604	Mycolicibacterium chitae strain JCM 12403	1	547423-547523	1	CRISPRCasFinder	no		WYL,c2c9_V-U4,csa3,DEDDh,cas3,DinG,cas4,PD-DExK	Orphan	TGGTGGGACCCGGTGGCCAACATGTGCCG	29	0	0	NA	NA	NA	1	1	Orphan	WYL,c2c9_V-U4,csa3,DEDDh,cas3,DinG,cas4,PD-DExK	NA|351aa|up_4|NZ_AP022604.1_542705_543758_-,NA|67aa|up_0|NZ_AP022604.1_547050_547251_-,NA|186aa|down_4|NZ_AP022604.1_551362_551920_+	NA|388aa|up_9|NZ_AP022604.1_537223_538387_+	cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant	NA|132aa|up_8|NZ_AP022604.1_538444_538840_-	cd01279, HTH_HspR-like, Helix-Turn-Helix DNA binding domain of HspR-like transcription regulators	NA|393aa|up_7|NZ_AP022604.1_538846_540025_-	PRK14279, PRK14279, molecular chaperone DnaJ	NA|207aa|up_6|NZ_AP022604.1_540071_540692_-	PRK14142, PRK14142, heat shock protein GrpE; Provisional	NA|618aa|up_5|NZ_AP022604.1_540688_542542_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|351aa|up_4|NZ_AP022604.1_542705_543758_-	NA	NA|291aa|up_3|NZ_AP022604.1_543855_544728_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|228aa|up_2|NZ_AP022604.1_544724_545408_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|503aa|up_1|NZ_AP022604.1_545538_547047_+	cd02110, SO_family_Moco_dimer, Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain	NA|67aa|up_0|NZ_AP022604.1_547050_547251_-	NA	NA|304aa|down_0|NZ_AP022604.1_547554_548466_+	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|210aa|down_1|NZ_AP022604.1_548482_549112_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|527aa|down_2|NZ_AP022604.1_549145_550726_+	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|180aa|down_3|NZ_AP022604.1_550738_551278_-	pfam04343, DUF488, Protein of unknown function, DUF488	NA|186aa|down_4|NZ_AP022604.1_551362_551920_+	NA	NA|311aa|down_5|NZ_AP022604.1_551940_552873_+	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family	NA|212aa|down_6|NZ_AP022604.1_552899_553535_+	PRK11907, PRK11907, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA|497aa|down_7|NZ_AP022604.1_553528_555019_-	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only]	NA|161aa|down_8|NZ_AP022604.1_555078_555561_+	PRK11907, PRK11907, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA|619aa|down_9|NZ_AP022604.1_555753_557610_-	COG0699, COG0699, Predicted GTPases (dynamin-related) [General function prediction only]
GCF_010727725.1_ASM1072772v1	NZ_AP022604	Mycolicibacterium chitae strain JCM 12403	2	1595275-1595415	1	PILER-CR	no		WYL,c2c9_V-U4,csa3,DEDDh,cas3,DinG,cas4,PD-DExK	Orphan	CGCCCTGGTCCGGGTAGCCGCC	22	0	0	NA	NA	NA	2	2	Orphan	WYL,c2c9_V-U4,csa3,DEDDh,cas3,DinG,cas4,PD-DExK	NA,NA|256aa|down_5|NZ_AP022604.1_1602593_1603361_-	NA|147aa|up_9|NZ_AP022604.1_1583915_1584356_-	pfam10756, bPH_6, Bacterial PH domain	NA|88aa|up_8|NZ_AP022604.1_1584504_1584768_-	PRK00159, PRK00159, putative septation inhibitor protein; Reviewed	NA|250aa|up_7|NZ_AP022604.1_1584877_1585627_+	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|229aa|up_6|NZ_AP022604.1_1585679_1586366_+	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II	NA|624aa|up_5|NZ_AP022604.1_1586343_1588215_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|447aa|up_4|NZ_AP022604.1_1588211_1589552_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|492aa|up_3|NZ_AP022604.1_1589598_1591074_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|473aa|up_2|NZ_AP022604.1_1591070_1592489_-	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|519aa|up_1|NZ_AP022604.1_1592517_1594074_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|156aa|up_0|NZ_AP022604.1_1594070_1594538_-	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|617aa|down_0|NZ_AP022604.1_1596735_1598586_+	pfam09848, DUF2075, Uncharacterized conserved protein (DUF2075)	NA|320aa|down_1|NZ_AP022604.1_1598601_1599561_-	pfam14088, DUF4268, Domain of unknown function (DUF4268)	NA|296aa|down_2|NZ_AP022604.1_1599846_1600734_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|358aa|down_3|NZ_AP022604.1_1600715_1601789_+	cd13560, PBP2_taurine, Taurine-binding periplasmic protein; the type 2 periplasmic binding protein fold	NA|266aa|down_4|NZ_AP022604.1_1601785_1602583_+	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|256aa|down_5|NZ_AP022604.1_1602593_1603361_-	NA	NA|278aa|down_6|NZ_AP022604.1_1603501_1604335_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|388aa|down_7|NZ_AP022604.1_1604378_1605542_+	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|580aa|down_8|NZ_AP022604.1_1605538_1607278_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|352aa|down_9|NZ_AP022604.1_1607274_1608330_+	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
GCF_010727725.1_ASM1072772v1	NZ_AP022604	Mycolicibacterium chitae strain JCM 12403	3	2747993-2748075	2	CRISPRCasFinder	no		WYL,c2c9_V-U4,csa3,DEDDh,cas3,DinG,cas4,PD-DExK	Orphan	GCCGGGCAGCGTCCGAAGGGCTGAG	25	0	0	NA	NA	NA	1	1	Orphan	WYL,c2c9_V-U4,csa3,DEDDh,cas3,DinG,cas4,PD-DExK	NA|156aa|up_6|NZ_AP022604.1_2738519_2738987_-,NA	NA|296aa|up_9|NZ_AP022604.1_2734878_2735766_-	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|546aa|up_8|NZ_AP022604.1_2735904_2737542_+	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17	NA|325aa|up_7|NZ_AP022604.1_2737544_2738519_+	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|156aa|up_6|NZ_AP022604.1_2738519_2738987_-	NA	NA|180aa|up_5|NZ_AP022604.1_2739184_2739724_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|473aa|up_4|NZ_AP022604.1_2739753_2741172_+	PRK07787, PRK07787, acyl-CoA synthetase; Validated	NA|116aa|up_3|NZ_AP022604.1_2741162_2741510_+	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|314aa|up_2|NZ_AP022604.1_2741516_2742458_-	TIGR03535, DapD_actino, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA|357aa|up_1|NZ_AP022604.1_2742536_2743607_+	PRK13007, PRK13007, succinyl-diaminopimelate desuccinylase; Reviewed	NA|192aa|up_0|NZ_AP022604.1_2745648_2746224_+	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein	NA|292aa|down_0|NZ_AP022604.1_2748099_2748975_+	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase	NA|315aa|down_1|NZ_AP022604.1_2748971_2749916_+	PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional	NA|123aa|down_2|NZ_AP022604.1_2749987_2750356_+	TIGR03544, cell_division_initiation_protein_DivIVA, DivIVA domain	NA|195aa|down_3|NZ_AP022604.1_2750352_2750937_+	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|62aa|down_4|NZ_AP022604.1_2751035_2751221_+	pfam11314, DUF3117, Protein of unknown function (DUF3117)	NA|390aa|down_5|NZ_AP022604.1_2751236_2752406_-	TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family	NA|213aa|down_6|NZ_AP022604.1_2754783_2755422_-	pfam13548, DUF4126, Domain of unknown function (DUF4126)	NA|225aa|down_7|NZ_AP022604.1_2755461_2756136_-	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|541aa|down_8|NZ_AP022604.1_2756214_2757837_-	COG3559, TnrB3, Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]	NA|302aa|down_9|NZ_AP022604.1_2757833_2758739_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
GCF_010727725.1_ASM1072772v1	NZ_AP022604	Mycolicibacterium chitae strain JCM 12403	4	5212627-5212697	3	CRISPRCasFinder	no		WYL,c2c9_V-U4,csa3,DEDDh,cas3,DinG,cas4,PD-DExK	Orphan	CGGCGAGGTGGTCTCGGCGGTGG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,c2c9_V-U4,csa3,DEDDh,cas3,DinG,cas4,PD-DExK	NA|107aa|up_3|NZ_AP022604.1_5208837_5209158_+,NA|360aa|down_8|NZ_AP022604.1_5221002_5222082_-	NA|952aa|up_9|NZ_AP022604.1_5199844_5202700_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|224aa|up_8|NZ_AP022604.1_5202847_5203519_-	TIGR00741, Probable_sigma54_modulation_protein_ORF3_ORF95	NA|212aa|up_7|NZ_AP022604.1_5203828_5204464_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|590aa|up_6|NZ_AP022604.1_5204496_5206266_-	PRK13616, PRK13616, MtrAB system accessory protein LpqB	NA|556aa|up_5|NZ_AP022604.1_5206262_5207930_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|226aa|up_4|NZ_AP022604.1_5207964_5208642_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|107aa|up_3|NZ_AP022604.1_5208837_5209158_+	NA	NA|598aa|up_2|NZ_AP022604.1_5209161_5210955_+	pfam06259, Abhydrolase_8, Alpha/beta hydrolase	NA|190aa|up_1|NZ_AP022604.1_5210956_5211526_+	pfam16708, LppA, Lipoprotein confined to pathogenic Mycobacterium	NA|211aa|up_0|NZ_AP022604.1_5211530_5212163_-	PRK07933, PRK07933, dTMP kinase	NA|485aa|down_0|NZ_AP022604.1_5212892_5214347_-	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase	NA|186aa|down_1|NZ_AP022604.1_5214426_5214984_-	pfam18556, TetR_C_35, Bacterial Tetracyclin repressor, C-terminal domain	NA|62aa|down_2|NZ_AP022604.1_5215103_5215289_-	pfam00301, Rubredoxin, Rubredoxin	NA|58aa|down_3|NZ_AP022604.1_5215285_5215459_-	pfam00301, Rubredoxin, Rubredoxin	NA|390aa|down_4|NZ_AP022604.1_5215455_5216625_-	cd03512, Alkane-hydroxylase, Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases	NA|496aa|down_5|NZ_AP022604.1_5216792_5218280_-	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|463aa|down_6|NZ_AP022604.1_5218340_5219729_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|409aa|down_7|NZ_AP022604.1_5219725_5220952_-	cd07011, cupin_PMI_type_I_N, type I phosphomannose isomerase in eukaryotes and bacteria, N-terminal cupin domain	NA|360aa|down_8|NZ_AP022604.1_5221002_5222082_-	NA	NA|473aa|down_9|NZ_AP022604.1_5222078_5223497_-	PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed
