assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	1	21783-22345	1	CRT	no		DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Orphan	NCCGGTGGTGNNGGTGGTGNNGGTGG	26	6	8	21851-21872|21896-21931|21955-21976|22078-22111|22135-22156|22135-22156|22135-22156|22292-22322	NZ_AP022564.1_4553422-4553443|NZ_AP022564.1_4553468-4553503|NZ_AP022564.1_4553527-4553548|NZ_AP022564.1_4553653-4553686|NZ_AP022564.1_4553710-4553731|NZ_AP022564.1_815360-815339|NZ_AP022564.1_4522593-4522572|NZ_AP022564.1_4553872-4553902	NA	10	10	Orphan	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA|61aa|up_5|NZ_AP022564.1_2785_2968_+,NA|149aa|up_3|NZ_AP022564.1_3866_4313_+,NA|805aa|up_1|NZ_AP022564.1_18428_20843_+,NA|86aa|up_0|NZ_AP022564.1_21216_21474_+,NA|816aa|down_3|NZ_AP022564.1_27506_29954_+,NA|143aa|down_5|NZ_AP022564.1_31969_32398_-	NA|149aa|up_9|NZ_AP022564.1_430_877_+	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|245aa|up_8|NZ_AP022564.1_839_1574_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|159aa|up_7|NZ_AP022564.1_1533_2010_+	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau	NA|195aa|up_6|NZ_AP022564.1_2204_2789_+	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	NA|61aa|up_5|NZ_AP022564.1_2785_2968_+	NA	NA|161aa|up_4|NZ_AP022564.1_3087_3570_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|149aa|up_3|NZ_AP022564.1_3866_4313_+	NA	NA|195aa|up_2|NZ_AP022564.1_9540_10125_-	pfam10759, DUF2587, Protein of unknown function (DUF2587)	NA|805aa|up_1|NZ_AP022564.1_18428_20843_+	NA	NA|86aa|up_0|NZ_AP022564.1_21216_21474_+	NA	NA|391aa|down_0|NZ_AP022564.1_22351_23524_+	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|167aa|down_1|NZ_AP022564.1_23710_24211_+	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|327aa|down_2|NZ_AP022564.1_24492_25473_+	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|816aa|down_3|NZ_AP022564.1_27506_29954_+	NA	NA|323aa|down_4|NZ_AP022564.1_30866_31835_-	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|143aa|down_5|NZ_AP022564.1_31969_32398_-	NA	NA|297aa|down_6|NZ_AP022564.1_32657_33548_-	PRK11242, PRK11242, DNA-binding transcriptional regulator CynR; Provisional	NA|292aa|down_7|NZ_AP022564.1_34930_35806_-	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism]	NA|108aa|down_8|NZ_AP022564.1_35802_36126_-	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|275aa|down_9|NZ_AP022564.1_36125_36950_-	PRK06142, PRK06142, crotonase/enoyl-CoA hydratase family protein
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	2	1513021-1513100	1	CRISPRCasFinder	no	csa3	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Type I-A	TTCGTCGAGCCTCGCTGAACCGC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA,NA	NA|143aa|up_9|NZ_AP022564.1_1506794_1507223_+	pfam13577, SnoaL_4, SnoaL-like domain	NA|172aa|up_8|NZ_AP022564.1_1507390_1507906_+	PRK14520, rpsP, 30S ribosomal protein S16; Provisional	NA|81aa|up_7|NZ_AP022564.1_1507914_1508157_+	PRK02821, PRK02821, RNA-binding protein	NA|174aa|up_6|NZ_AP022564.1_1508168_1508690_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|234aa|up_5|NZ_AP022564.1_1508698_1509400_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|303aa|up_4|NZ_AP022564.1_1509396_1510305_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|114aa|up_3|NZ_AP022564.1_1510683_1511025_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|283aa|up_2|NZ_AP022564.1_1511095_1511944_+	TIGR02227, Inactive_signal_peptidase_IA	NA|240aa|up_1|NZ_AP022564.1_1511947_1512667_+	PRK00015, rnhB, ribonuclease HII; Validated	NA|102aa|up_0|NZ_AP022564.1_1512663_1512969_+	pfam10611, DUF2469, Protein of unknown function (DUF2469)	NA|222aa|down_0|NZ_AP022564.1_1513124_1513790_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|123aa|down_1|NZ_AP022564.1_1513908_1514277_+	PRK12497, PRK12497, YraN family protein	NA|504aa|down_2|NZ_AP022564.1_1514276_1515788_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|379aa|down_3|NZ_AP022564.1_1515784_1516921_+	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|284aa|down_4|NZ_AP022564.1_1516961_1517813_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|387aa|down_5|NZ_AP022564.1_1517817_1518978_+	cd03332, LMO_FMN, L-Lactate 2-monooxygenase (LMO) FMN-binding domain	NA|300aa|down_6|NZ_AP022564.1_1519009_1519909_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|163aa|down_7|NZ_AP022564.1_1519905_1520394_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|280aa|down_8|NZ_AP022564.1_1520636_1521476_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|272aa|down_9|NZ_AP022564.1_1521491_1522307_+	PRK09377, tsf, elongation factor Ts; Provisional
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	3	2394311-2394907	2	CRT	no	cas4	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Unclear	NCGGCGGCAACGGCGGNN	18	0	0	NA	NA	NA	9	9	Unclear	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA|364aa|up_0|NZ_AP022564.1_2392186_2393278_+,NA|141aa|down_5|NZ_AP022564.1_2400130_2400553_+,NA|163aa|down_7|NZ_AP022564.1_2402625_2403114_+,NA|176aa|down_8|NZ_AP022564.1_2403124_2403652_+	NA|409aa|up_9|NZ_AP022564.1_2380164_2381391_-	PRK03333, coaE, dephospho-CoA kinase/protein folding accessory domain-containing protein; Provisional	NA|481aa|up_8|NZ_AP022564.1_2381420_2382863_-	PRK07899, rpsA, 30S ribosomal protein S1; Reviewed	NA|376aa|up_7|NZ_AP022564.1_2383026_2384154_+	pfam13367, PrsW-protease, Protease prsW family	NA|909aa|up_6|NZ_AP022564.1_2384233_2386960_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|96aa|up_5|NZ_AP022564.1_2386988_2387276_-	pfam03992, ABM, Antibiotic biosynthesis monooxygenase	NA|150aa|up_4|NZ_AP022564.1_2387400_2387850_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|399aa|up_3|NZ_AP022564.1_2387842_2389039_+	PRK06059, PRK06059, lipid-transfer protein; Provisional	NA|79aa|up_2|NZ_AP022564.1_2389152_2389389_+	COG1872, COG1872, Uncharacterized conserved protein [Function unknown]	NA|785aa|up_1|NZ_AP022564.1_2389363_2391718_-	pfam01326, PPDK_N, Pyruvate phosphate dikinase, PEP/pyruvate binding domain	NA|364aa|up_0|NZ_AP022564.1_2392186_2393278_+	NA	NA|219aa|down_0|NZ_AP022564.1_2395636_2396293_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|249aa|down_1|NZ_AP022564.1_2396301_2397048_-	TIGR03691, 20S_bact_alpha, proteasome, alpha subunit, bacterial type	NA|295aa|down_2|NZ_AP022564.1_2397044_2397929_-	TIGR03690, 20S_bact_beta, proteasome, beta subunit, bacterial type	NA|65aa|down_3|NZ_AP022564.1_2397925_2398120_-	pfam05639, Pup, Pup-like protein	NA|503aa|down_4|NZ_AP022564.1_2398221_2399730_-	TIGR03688, pupylate_PafA2, proteasome accessory factor PafA2	NA|141aa|down_5|NZ_AP022564.1_2400130_2400553_+	NA	NA|608aa|down_6|NZ_AP022564.1_2400646_2402470_-	TIGR03689, pup_AAA, proteasome ATPase	NA|163aa|down_7|NZ_AP022564.1_2402625_2403114_+	NA	NA|176aa|down_8|NZ_AP022564.1_2403124_2403652_+	NA	NA|98aa|down_9|NZ_AP022564.1_2403654_2403948_+	pfam04456, DUF503, Protein of unknown function (DUF503)
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	4	2768403-2768481	2	CRISPRCasFinder	no		DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Orphan	CCGCCGAATTACACCGGGCGGTT	23	1	16	2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458|2768426-2768458	NZ_AP022564.1_264203-264171|NZ_AP022564.1_264260-264228|NZ_AP022564.1_729340-729308|NZ_AP022564.1_2147612-2147644|NZ_AP022564.1_2206493-2206525|NZ_AP022564.1_2206550-2206582|NZ_AP022564.1_2206608-2206640|NZ_AP022564.1_2750094-2750126|NZ_AP022564.1_259428-259396|NZ_AP022564.1_686775-686743|NZ_AP022564.1_4455978-4456010|NZ_AP022564.1_2100850-2100818|NZ_AP022564.1_3828376-3828344|NZ_AP022564.1_3828432-3828400|NZ_AP022564.1_3828488-3828456|NZ_AP022564.1_3828544-3828512	NA	1	1	Orphan	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA,NA	NA|286aa|up_9|NZ_AP022564.1_2758252_2759110_+	PRK00055, PRK00055, ribonuclease Z; Reviewed	NA|87aa|up_8|NZ_AP022564.1_2759227_2759488_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|321aa|up_7|NZ_AP022564.1_2759562_2760525_-	PRK07914, PRK07914, hypothetical protein; Reviewed	NA|521aa|up_6|NZ_AP022564.1_2760537_2762100_-	pfam03772, Competence, Competence protein	NA|284aa|up_5|NZ_AP022564.1_2762102_2762954_-	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|179aa|up_4|NZ_AP022564.1_2763049_2763586_-	pfam11611, DUF4352, Domain of unknown function (DUF4352)	NA|387aa|up_3|NZ_AP022564.1_2763727_2764888_+	TIGR03204, pimC_large, pimeloyl-CoA dehydrogenase, large subunit	NA|370aa|up_2|NZ_AP022564.1_2764902_2766012_+	TIGR03203, pimD_small, pimeloyl-CoA dehydrogenase, small subunit	NA|398aa|up_1|NZ_AP022564.1_2766104_2767298_-	PRK01346, PRK01346, enhanced intracellular survival protein Eis	NA|349aa|up_0|NZ_AP022564.1_2767354_2768401_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|148aa|down_0|NZ_AP022564.1_2769274_2769718_+	pfam05423, Mycobact_memb, Mycobacterium membrane protein	NA|977aa|down_1|NZ_AP022564.1_2769714_2772645_+	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|287aa|down_2|NZ_AP022564.1_2772649_2773510_-	TIGR00762, DegV, EDD domain protein, DegV family	NA|249aa|down_3|NZ_AP022564.1_2773509_2774256_-	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases	NA|226aa|down_4|NZ_AP022564.1_2774245_2774923_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|132aa|down_5|NZ_AP022564.1_2774919_2775315_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|226aa|down_6|NZ_AP022564.1_2775311_2775989_-	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|349aa|down_7|NZ_AP022564.1_2776095_2777142_+	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)	NA|882aa|down_8|NZ_AP022564.1_2777294_2779940_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|481aa|down_9|NZ_AP022564.1_2785943_2787386_-	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	5	2781383-2783391	3,4	CRT,CRT	no		DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Orphan	CGNNNCCGCCGNNNCCGCCG,CCNCCGTNNCCGCCGTNNCCG	20,21	0	0	NA	NA	NA:NA	34,34	34	Orphan	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA,NA	NA|196aa|up_9|NZ_AP022564.1_2768466_2769054_-	pfam03413, PepSY, Peptidase propeptide and YPEB domain	NA|148aa|up_8|NZ_AP022564.1_2769274_2769718_+	pfam05423, Mycobact_memb, Mycobacterium membrane protein	NA|977aa|up_7|NZ_AP022564.1_2769714_2772645_+	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|287aa|up_6|NZ_AP022564.1_2772649_2773510_-	TIGR00762, DegV, EDD domain protein, DegV family	NA|249aa|up_5|NZ_AP022564.1_2773509_2774256_-	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases	NA|226aa|up_4|NZ_AP022564.1_2774245_2774923_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|132aa|up_3|NZ_AP022564.1_2774919_2775315_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|226aa|up_2|NZ_AP022564.1_2775311_2775989_-	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|349aa|up_1|NZ_AP022564.1_2776095_2777142_+	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)	NA|882aa|up_0|NZ_AP022564.1_2777294_2779940_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|481aa|down_0|NZ_AP022564.1_2785943_2787386_-	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|303aa|down_1|NZ_AP022564.1_2787382_2788291_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|418aa|down_2|NZ_AP022564.1_2788306_2789560_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|471aa|down_3|NZ_AP022564.1_2789556_2790969_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|720aa|down_4|NZ_AP022564.1_2790965_2793125_-	cd07302, CHD, cyclase homology domain	NA|293aa|down_5|NZ_AP022564.1_2793214_2794093_+	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|132aa|down_6|NZ_AP022564.1_2794076_2794472_-	pfam14552, Tautomerase_2, Tautomerase enzyme	NA|248aa|down_7|NZ_AP022564.1_2794493_2795237_-	PRK08317, PRK08317, hypothetical protein; Provisional	NA|685aa|down_8|NZ_AP022564.1_2795252_2797307_-	PRK02628, nadE, NAD synthetase; Reviewed	NA|180aa|down_9|NZ_AP022564.1_2797364_2797904_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	6	3296313-3296419	3	CRISPRCasFinder	no		DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Orphan	TCGGCTTCGGCCTGCGCCTGAGC	23	1	1	3296378-3296396	NZ_AP022564.1_2236421-2236439	NA	2	2	Orphan	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA|275aa|up_2|NZ_AP022564.1_3292797_3293622_+,NA	NA|206aa|up_9|NZ_AP022564.1_3286787_3287405_+	COG3145, AlkB, Alkylated DNA repair protein [DNA replication, recombination, and repair]	NA|219aa|up_8|NZ_AP022564.1_3287424_3288081_-	pfam18702, DUF5642, Domain of unknown function (DUF5642)	NA|338aa|up_7|NZ_AP022564.1_3288123_3289137_-	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor	NA|450aa|up_6|NZ_AP022564.1_3289291_3290641_+	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase	NA|110aa|up_5|NZ_AP022564.1_3290741_3291071_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|350aa|up_4|NZ_AP022564.1_3291067_3292117_-	pfam12787, EcsC, EcsC protein family	NA|203aa|up_3|NZ_AP022564.1_3292192_3292801_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|275aa|up_2|NZ_AP022564.1_3292797_3293622_+	NA	NA|405aa|up_1|NZ_AP022564.1_3293643_3294858_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|190aa|up_0|NZ_AP022564.1_3295045_3295615_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|221aa|down_0|NZ_AP022564.1_3297015_3297678_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|423aa|down_1|NZ_AP022564.1_3297688_3298957_-	cd00887, MoeA, MoeA family	NA|304aa|down_2|NZ_AP022564.1_3299014_3299926_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|226aa|down_3|NZ_AP022564.1_3300003_3300681_+	pfam01812, 5-FTHF_cyc-lig, 5-formyltetrahydrofolate cyclo-ligase family	NA|120aa|down_4|NZ_AP022564.1_3300725_3301085_+	COG2331, COG2331, Uncharacterized protein conserved in bacteria [Function unknown]	NA|215aa|down_5|NZ_AP022564.1_3301151_3301796_+	cd11614, SAF_CpaB_FlgA_like, SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus assembly CpaB	NA|144aa|down_6|NZ_AP022564.1_3301800_3302232_-	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|165aa|down_7|NZ_AP022564.1_3302461_3302956_-	cd00886, MogA_MoaB, MogA_MoaB family	NA|456aa|down_8|NZ_AP022564.1_3303175_3304543_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|485aa|down_9|NZ_AP022564.1_3304589_3306044_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	7	3850798-3851263	5	CRT	no		DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Orphan	CGCCGCCGTNNCCGCCGTTGCC	22	2	15	3850895-3850920|3850895-3850920|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962|3850943-3850962	NZ_AP022564.1_388631-388606|NZ_AP022564.1_3811368-3811393|NZ_AP022564.1_487975-487956|NZ_AP022564.1_4075525-4075544|NZ_AP022564.1_3077-3058|NZ_AP022564.1_26967-26948|NZ_AP022564.1_483662-483643|NZ_AP022564.1_826566-826547|NZ_AP022564.1_2507095-2507076|NZ_AP022564.1_3811416-3811435|NZ_AP022564.1_4072078-4072097|NZ_AP022564.1_4506347-4506328|NZ_AP022564.1_4523978-4523959|NZ_AP022564.1_4534561-4534542|NZ_AP022564.1_4558584-4558565	NA	7	7	Orphan	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA|92aa|up_9|NZ_AP022564.1_3836040_3836316_+,NA|65aa|up_8|NZ_AP022564.1_3836335_3836530_-,NA|440aa|down_7|NZ_AP022564.1_3857466_3858786_+	NA|92aa|up_9|NZ_AP022564.1_3836040_3836316_+	NA	NA|65aa|up_8|NZ_AP022564.1_3836335_3836530_-	NA	NA|588aa|up_7|NZ_AP022564.1_3837079_3838843_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|551aa|up_6|NZ_AP022564.1_3839093_3840746_+	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|280aa|up_5|NZ_AP022564.1_3840745_3841585_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|217aa|up_4|NZ_AP022564.1_3841581_3842232_+	COG3571, COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]	NA|495aa|up_3|NZ_AP022564.1_3842251_3843736_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|430aa|up_2|NZ_AP022564.1_3843755_3845045_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|486aa|up_1|NZ_AP022564.1_3845150_3846608_-	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins	NA|494aa|up_0|NZ_AP022564.1_3846604_3848086_-	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins	NA|398aa|down_0|NZ_AP022564.1_3852053_3853247_+	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|259aa|down_1|NZ_AP022564.1_3853243_3854020_-	cd01823, SEST_like, SEST_like	NA|254aa|down_2|NZ_AP022564.1_3854039_3854801_-	PRK00208, thiG, thiazole synthase; Reviewed	NA|66aa|down_3|NZ_AP022564.1_3854793_3854991_-	PRK05863, PRK05863, sulfur carrier protein ThiS; Provisional	NA|337aa|down_4|NZ_AP022564.1_3854990_3856001_-	TIGR02352, Glycine_oxidase, glycine oxidase ThiO	NA|231aa|down_5|NZ_AP022564.1_3856058_3856751_+	PRK00043, thiE, thiamine phosphate synthase	NA|158aa|down_6|NZ_AP022564.1_3856833_3857307_-	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|440aa|down_7|NZ_AP022564.1_3857466_3858786_+	NA	NA|321aa|down_8|NZ_AP022564.1_3858806_3859769_+	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|763aa|down_9|NZ_AP022564.1_3859768_3862057_+	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	8	4199677-4199836	4	CRISPRCasFinder	no		DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Orphan	GCAGCGGGCCCGCAGCCGGAAACGCCAG	28	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA|48aa|up_4|NZ_AP022564.1_4195575_4195719_-,NA|217aa|up_2|NZ_AP022564.1_4197234_4197885_-,NA|159aa|up_0|NZ_AP022564.1_4198351_4198828_+,NA|122aa|down_1|NZ_AP022564.1_4202511_4202877_-	NA|373aa|up_9|NZ_AP022564.1_4191434_4192553_+	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|202aa|up_8|NZ_AP022564.1_4192562_4193168_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|319aa|up_7|NZ_AP022564.1_4193222_4194179_+	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|306aa|up_6|NZ_AP022564.1_4194175_4195093_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|118aa|up_5|NZ_AP022564.1_4195150_4195504_+	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|48aa|up_4|NZ_AP022564.1_4195575_4195719_-	NA	NA|330aa|up_3|NZ_AP022564.1_4195912_4196902_+	pfam00665, rve, Integrase core domain	NA|217aa|up_2|NZ_AP022564.1_4197234_4197885_-	NA	NA|60aa|up_1|NZ_AP022564.1_4197957_4198137_-	pfam10774, DUF4226, Domain of unknown function (DUF4226)	NA|159aa|up_0|NZ_AP022564.1_4198351_4198828_+	NA	NA|322aa|down_0|NZ_AP022564.1_4201276_4202242_+	pfam06682, SARAF, SOCE-associated regulatory factor of calcium homoeostasis	NA|122aa|down_1|NZ_AP022564.1_4202511_4202877_-	NA	NA|353aa|down_2|NZ_AP022564.1_4202969_4204028_-	pfam10774, DUF4226, Domain of unknown function (DUF4226)	NA|500aa|down_3|NZ_AP022564.1_4204154_4205654_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1404aa|down_4|NZ_AP022564.1_4205658_4209870_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|101aa|down_5|NZ_AP022564.1_4209972_4210275_+	pfam00934, PE, PE family	NA|397aa|down_6|NZ_AP022564.1_4210278_4211469_+	pfam00823, PPE, PPE family	NA|106aa|down_7|NZ_AP022564.1_4211583_4211901_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|96aa|down_8|NZ_AP022564.1_4211942_4212230_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|283aa|down_9|NZ_AP022564.1_4212373_4213222_+	pfam14011, ESX-1_EspG, EspG family
GCF_010727125.1_ASM1072712v1	NZ_AP022564	Mycolicibacter terrae strain JCM 12143	9	4560428-4560644	1	PILER-CR	no		DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	Orphan	AACGCCGCCGGTGGAACCGGCGGTAACGGCGGCAACGGCG	40	2	2	4560468-4560543|4560584-4560612	NZ_AP022564.1_28861-28936|NZ_AP022564.1_28969-28997	NA	2	2	Orphan	DEDDh,cas3,csb1gr7,csa3,WYL,cas4,DinG	NA|646aa|up_3|NZ_AP022564.1_4541608_4543546_-,NA|773aa|up_1|NZ_AP022564.1_4547625_4549944_+,NA|142aa|down_2|NZ_AP022564.1_4563572_4563998_-	NA|139aa|up_9|NZ_AP022564.1_4536878_4537295_-	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|366aa|up_8|NZ_AP022564.1_4537325_4538423_+	cd03316, MR_like, Mandelate racemase (MR)-like subfamily of the enolase superfamily	NA|277aa|up_7|NZ_AP022564.1_4538529_4539360_-	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|303aa|up_6|NZ_AP022564.1_4539356_4540265_-	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|270aa|up_5|NZ_AP022564.1_4540261_4541071_-	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|183aa|up_4|NZ_AP022564.1_4541076_4541625_-	pfam10759, DUF2587, Protein of unknown function (DUF2587)	NA|646aa|up_3|NZ_AP022564.1_4541608_4543546_-	NA	NA|399aa|up_2|NZ_AP022564.1_4543674_4544871_+	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily	NA|773aa|up_1|NZ_AP022564.1_4547625_4549944_+	NA	NA|1887aa|up_0|NZ_AP022564.1_4552636_4558297_+	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|112aa|down_0|NZ_AP022564.1_4560653_4560989_-	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	NA|205aa|down_1|NZ_AP022564.1_4561689_4562304_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|142aa|down_2|NZ_AP022564.1_4563572_4563998_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
