The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP022603	Mycolicibacterium fallax strain JCM 6405	4156821	939547	965349	4156821	transposase,integrase	Mycobacterium_phage(66.67%)	21	935111:935127	970960:970976
935111:935127	attL	CGAGGGCTACCGGGTGA	NA	NA	NA	NA
WP_085100861.1|939547_940867_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	92.0	1.3e-231
WP_085095809.1|941288_941522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085095811.1|941518_941854_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
WP_133055135.1|942299_942638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085095815.1|942808_944044_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	53.2	2.4e-110
WP_163742128.1|944189_944675_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085095819.1|944845_945910_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_163742211.1|946172_946970_+|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
WP_163742215.1|946966_947956_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_163742218.1|949248_950286_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_085100120.1|950293_951325_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_133055194.1|951332_951650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046253719.1|954699_955728_+	TniB family NTP-binding protein	NA	NA	NA	NA	NA
WP_046253720.1|955729_956551_+	TniQ family protein	NA	NA	NA	NA	NA
WP_163742221.1|956988_958467_+	GMC family oxidoreductase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_046253722.1|958518_959190_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_163742225.1|959291_959717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052740224.1|959816_960389_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046253724.1|960398_961049_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_085100058.1|961367_962126_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_083033565.1|964035_965349_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	91.8	3.2e-230
970960:970976	attR	CGAGGGCTACCGGGTGA	NA	NA	NA	NA
>prophage 2
NZ_AP022603	Mycolicibacterium fallax strain JCM 6405	4156821	1037389	1051728	4156821	transposase,integrase	Burkholderia_virus(50.0%)	14	1038468:1038485	1041385:1041402
WP_085100076.1|1037389_1038451_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
1038468:1038485	attL	CCCGGGTTTGATGCACAC	NA	NA	NA	NA
WP_163742229.1|1038958_1039264_+|transposase	IS3 family transposase	transposase	A0A1B3AZE5	Gordonia_phage	53.9	3.1e-11
WP_085101219.1|1039580_1040795_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_163742232.1|1040861_1041380_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	Q8W6R2	Burkholderia_virus	49.0	1.3e-30
WP_085097531.1|1041438_1041675_-	ubiD family decarboxylase	NA	NA	NA	NA	NA
1041385:1041402	attR	GTGTGCATCAAACCCGGG	NA	NA	NA	NA
WP_133055157.1|1041838_1042717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_133055156.1|1042716_1043229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_133055155.1|1043234_1043666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055154.1|1043689_1044433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085097519.1|1044469_1045411_-	DUF2185 domain-containing protein	NA	NA	NA	NA	NA
WP_085097537.1|1045626_1045890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055153.1|1046639_1048475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085097510.1|1048893_1050129_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	53.2	2.9e-108
WP_109750552.1|1050503_1051728_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	46.3	2.7e-58
>prophage 3
NZ_AP022603	Mycolicibacterium fallax strain JCM 6405	4156821	1712553	1721404	4156821		Mycobacterium_phage(25.0%)	12	NA	NA
WP_165757673.1|1712553_1712898_+	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	45.5	2.3e-10
WP_085096943.1|1712944_1713145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109750538.1|1713270_1713612_+	low affinity iron permease family protein	NA	G1JW61	Mycobacterium_phage	55.9	1.2e-24
WP_085096938.1|1713730_1713982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085096935.1|1713998_1714604_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_085096933.1|1714732_1716901_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	50.5	8.5e-204
WP_085096930.1|1716867_1717314_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	31.7	1.6e-08
WP_085096926.1|1717389_1717641_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	63.6	3.0e-20
WP_085096923.1|1718067_1718640_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	31.3	9.6e-06
WP_085097188.1|1718744_1719305_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_085096920.1|1719342_1720533_+	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	36.5	2.2e-57
WP_085097185.1|1720555_1721404_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	30.3	1.5e-07
>prophage 4
NZ_AP022603	Mycolicibacterium fallax strain JCM 6405	4156821	3190221	3238957	4156821	transposase,integrase	Burkholderia_phage(28.57%)	46	3217626:3217641	3242573:3242588
WP_085100992.1|3190221_3191484_+|transposase	ISL3 family transposase	transposase	A9YX10	Burkholderia_phage	28.3	1.2e-29
WP_011895440.1|3192613_3194350_-	DUF1446 domain-containing protein	NA	NA	NA	NA	NA
WP_011895439.1|3194346_3195159_-	TIGR03084 family protein	NA	NA	NA	NA	NA
WP_011895438.1|3195161_3195929_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_163742513.1|3196343_3196847_-|transposase	transposase	transposase	A9YX10	Burkholderia_phage	27.4	1.9e-05
WP_163742515.1|3196914_3197364_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_085095082.1|3197710_3199219_-	carboxylesterase/lipase family protein	NA	A0A0M4JT58	Mollivirus	31.2	7.8e-23
WP_085095108.1|3199440_3200409_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_079626716.1|3200576_3200897_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_085095080.1|3200922_3202311_+	cytochrome P450	NA	NA	NA	NA	NA
WP_085095078.1|3202307_3203513_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_067992196.1|3203778_3204189_+	SCP2 sterol-binding domain-containing protein	NA	NA	NA	NA	NA
WP_078290122.1|3204237_3205854_+	fatty acid--CoA ligase	NA	NA	NA	NA	NA
WP_083000311.1|3205899_3207006_+	NDMA-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.9	1.6e-36
WP_043985049.1|3207277_3208378_+	BtrH N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_043985051.1|3208374_3209043_+	transglutaminase domain-containing protein	NA	NA	NA	NA	NA
WP_162291742.1|3209267_3209501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078281697.1|3209468_3209852_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_062655119.1|3210033_3211083_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_043985058.1|3212294_3213092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163742521.1|3213400_3214195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043985060.1|3214278_3215031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082067868.1|3215027_3215888_-	TIGR04255 family protein	NA	NA	NA	NA	NA
WP_085095074.1|3216081_3216540_-	hypothetical protein	NA	NA	NA	NA	NA
3217626:3217641	attL	TCGGCGAACAGCGCCA	NA	NA	NA	NA
WP_043985064.1|3218336_3218534_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_109749372.1|3218548_3219871_+|integrase	site-specific integrase	integrase	A0A0E3XBN7	Gordonia_phage	39.5	4.3e-57
WP_085095106.1|3220111_3221326_-|integrase	site-specific integrase	integrase	A0A1W6JQG4	Corynebacterium_phage	36.6	3.9e-49
WP_133055125.1|3221318_3221843_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085095070.1|3221954_3222200_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_133055124.1|3222379_3222679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_133055123.1|3223006_3223753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055122.1|3223755_3225951_-	cell division protein FtsK	NA	NA	NA	NA	NA
WP_085095065.1|3225953_3226430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055121.1|3226432_3227134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055120.1|3227133_3227451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085095061.1|3228067_3229024_-	DUF2637 domain-containing protein	NA	NA	NA	NA	NA
WP_133055119.1|3229062_3229998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055118.1|3230032_3230416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055117.1|3230453_3231902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_133055116.1|3233685_3233982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109750472.1|3233981_3235298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_133055115.1|3235495_3236029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085095047.1|3236201_3236621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085095044.1|3236832_3237192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_163742525.1|3237181_3237445_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085095040.1|3237820_3238957_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0E3XBN7	Gordonia_phage	35.8	8.7e-51
3242573:3242588	attR	TGGCGCTGTTCGCCGA	NA	NA	NA	NA
