assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010706435.1_ASM1070643v1	NZ_CP048647	Escherichia coli strain GW-AmxH19 chromosome, complete genome	1	1610709-1610822	1	CRISPRCasFinder	no		cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	Orphan	TGCCGGATGCGCTTCGCTTATCCGGCCTACAAA	33	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	NA,NA	NA|74aa|up_9|NZ_CP048647.1_1600278_1600500_-	PRK09956, PRK09956, ISNCY family transposase	NA|304aa|up_8|NZ_CP048647.1_1600512_1601424_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP048647.1_1601616_1602807_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP048647.1_1602803_1604063_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP048647.1_1604052_1605681_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP048647.1_1605953_1607312_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP048647.1_1607316_1608393_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP048647.1_1608595_1609246_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP048647.1_1609299_1609554_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP048647.1_1609553_1610684_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP048647.1_1610873_1613159_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1253aa|down_1|NZ_CP048647.1_1613841_1617600_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP048647.1_1617739_1618462_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP048647.1_1618608_1621236_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP048647.1_1621384_1623073_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP048647.1_1623069_1623693_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP048647.1_1623836_1628231_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP048647.1_1628231_1629881_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP048647.1_1629885_1630662_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|NZ_CP048647.1_1630735_1631920_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCF_010706435.1_ASM1070643v1	NZ_CP048647	Escherichia coli strain GW-AmxH19 chromosome, complete genome	2	2338521-2338644	2	CRISPRCasFinder	no	DEDDh	cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	NA,NA|30aa|down_7|NZ_CP048647.1_2347540_2347630_+	NA|79aa|up_9|NZ_CP048647.1_2327427_2327664_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_8|NZ_CP048647.1_2327974_2329387_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|NZ_CP048647.1_2329943_2330153_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|NZ_CP048647.1_2330608_2331235_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_5|NZ_CP048647.1_2331255_2333358_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_4|NZ_CP048647.1_2333370_2334009_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_3|NZ_CP048647.1_2334072_2334741_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_2|NZ_CP048647.1_2334737_2335523_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_1|NZ_CP048647.1_2335526_2336339_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|537aa|up_0|NZ_CP048647.1_2336344_2337955_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|419aa|down_0|NZ_CP048647.1_2338958_2340215_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP048647.1_2340255_2341629_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP048647.1_2341843_2342485_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP048647.1_2342524_2343673_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP048647.1_2343963_2345175_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP048647.1_2345287_2346220_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP048647.1_2346216_2347242_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP048647.1_2347540_2347630_+	NA	NA|390aa|down_8|NZ_CP048647.1_2347794_2348964_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP048647.1_2349109_2349691_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_010706435.1_ASM1070643v1	NZ_CP048647	Escherichia coli strain GW-AmxH19 chromosome, complete genome	3	3100579-3100670	3	CRISPRCasFinder	no		cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	NA|70aa|up_9|NZ_CP048647.1_3089829_3090039_-,NA	NA|70aa|up_9|NZ_CP048647.1_3089829_3090039_-	NA	NA|1321aa|up_8|NZ_CP048647.1_3090093_3094056_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP048647.1_3094095_3094734_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP048647.1_3095021_3096113_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP048647.1_3096112_3096805_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP048647.1_3096816_3097203_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP048647.1_3097210_3098011_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP048647.1_3098020_3098611_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP048647.1_3098621_3099116_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP048647.1_3099136_3100465_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP048647.1_3101093_3101690_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP048647.1_3101710_3101938_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP048647.1_3101975_3103217_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP048647.1_3103751_3104672_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP048647.1_3104671_3104977_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP048647.1_3105332_3105932_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP048647.1_3105928_3108475_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP048647.1_3108474_3109647_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP048647.1_3109776_3110469_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP048647.1_3110441_3111470_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_010706435.1_ASM1070643v1	NZ_CP048647	Escherichia coli strain GW-AmxH19 chromosome, complete genome	4	3773089-3773224	4	CRISPRCasFinder	no		cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	Orphan	GCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGC	43	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	NA|82aa|up_3|NZ_CP048647.1_3768365_3768611_-,NA	NA|484aa|up_9|NZ_CP048647.1_3761622_3763074_-	PRK09425, prpD, bifunctional 2-methylcitrate dehydratase/aconitate hydratase	NA|390aa|up_8|NZ_CP048647.1_3763107_3764277_-	PRK12351, PRK12351, methylcitrate synthase; Provisional	NA|297aa|up_7|NZ_CP048647.1_3764436_3765327_-	PRK11320, prpB, 2-methylisocitrate lyase; Provisional	NA|529aa|up_6|NZ_CP048647.1_3765565_3767152_+	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional	NA|92aa|up_5|NZ_CP048647.1_3767252_3767528_-	PRK09929, PRK09929, hypothetical protein; Provisional	NA|225aa|up_4|NZ_CP048647.1_3767674_3768349_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|82aa|up_3|NZ_CP048647.1_3768365_3768611_-	NA	NA|350aa|up_2|NZ_CP048647.1_3769232_3770282_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|461aa|up_1|NZ_CP048647.1_3770658_3772041_-	PRK06846, PRK06846, putative deaminase; Validated	NA|317aa|up_0|NZ_CP048647.1_3772050_3773001_-	PRK12352, PRK12352, putative carbamate kinase; Reviewed	NA|473aa|down_0|NZ_CP048647.1_3773247_3774666_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|516aa|down_1|NZ_CP048647.1_3774665_3776213_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|288aa|down_2|NZ_CP048647.1_3776202_3777066_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|202aa|down_3|NZ_CP048647.1_3777105_3777711_-	sd00045, ANK, ankyrin repeats	NA|166aa|down_4|NZ_CP048647.1_3777968_3778466_+	pfam06496, DUF1097, Protein of unknown function (DUF1097)	NA|311aa|down_5|NZ_CP048647.1_3778557_3779490_+	PRK10094, PRK10094, HTH-type transcriptional activator AllS	NA|363aa|down_6|NZ_CP048647.1_3779531_3780620_-	smart00052, EAL, Putative diguanylate phosphodiesterase	NA|678aa|down_7|NZ_CP048647.1_3781497_3783531_-	PRK09928, PRK09928, choline transport protein BetT; Provisional	NA|196aa|down_8|NZ_CP048647.1_3783659_3784247_+	PRK00767, PRK00767, transcriptional regulator BetI; Validated	NA|491aa|down_9|NZ_CP048647.1_3784260_3785733_+	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional
GCF_010706435.1_ASM1070643v1	NZ_CP048647	Escherichia coli strain GW-AmxH19 chromosome, complete genome	5	4380925-4381064	5	CRISPRCasFinder	no		cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	Orphan	TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACA	44	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,c2c9_V-U4,csa3,DEDDh,RT,DinG,cas14j,WYL	NA,NA	NA|340aa|up_9|NZ_CP048647.1_4369135_4370155_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|188aa|up_8|NZ_CP048647.1_4370158_4370722_-	PRK09825, idnK, gluconokinase	NA|344aa|up_7|NZ_CP048647.1_4370938_4371970_+	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|255aa|up_6|NZ_CP048647.1_4371993_4372758_+	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|440aa|up_5|NZ_CP048647.1_4372822_4374142_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|333aa|up_4|NZ_CP048647.1_4374208_4375207_+	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|501aa|up_3|NZ_CP048647.1_4375284_4376787_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP048647.1_4376947_4378030_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP048647.1_4378029_4379130_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP048647.1_4379396_4380908_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP048647.1_4381165_4381609_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP048647.1_4381608_4384464_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|396aa|down_2|NZ_CP048647.1_4384510_4385698_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP048647.1_4385890_4386394_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP048647.1_4386571_4386988_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP048647.1_4387149_4388154_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|NZ_CP048647.1_4388198_4388651_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|407aa|down_7|NZ_CP048647.1_4389328_4390549_+	PRK01388, PRK01388, arginine deiminase; Provisional	NA|311aa|down_8|NZ_CP048647.1_4390559_4391492_+	PRK12354, PRK12354, carbamate kinase; Reviewed	NA|335aa|down_9|NZ_CP048647.1_4391515_4392520_+	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated
