assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010669025.1_ASM1066902v1	NZ_CP048605	Escherichia coli strain PapRG-06-5 chromosome, complete genome	1	264072-264219	1	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	Unclear	CCGCATCCGACATTGGCAGTGTGCCTGATGCGACGCTATTCGCGTCTTA	49	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	NA|22aa|up_2|NZ_CP048605.1_262217_262283_+,NA	NA|273aa|up_9|NZ_CP048605.1_256184_257003_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP048605.1_256999_257566_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP048605.1_257875_259648_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP048605.1_259765_260218_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP048605.1_260246_260987_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP048605.1_261021_261543_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP048605.1_261544_262147_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP048605.1_262217_262283_+	NA	NA|204aa|up_1|NZ_CP048605.1_262421_263033_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP048605.1_263041_264052_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP048605.1_264297_265083_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP048605.1_265079_265835_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP048605.1_265913_266846_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP048605.1_266861_268184_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP048605.1_268303_269275_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP048605.1_269405_270848_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP048605.1_270975_271845_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP048605.1_272182_273658_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP048605.1_273892_275704_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP048605.1_275740_276382_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_010669025.1_ASM1066902v1	NZ_CP048605	Escherichia coli strain PapRG-06-5 chromosome, complete genome	2	461952-462075	2	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	NA,NA|30aa|down_7|NZ_CP048605.1_470971_471061_+	NA|471aa|up_9|NZ_CP048605.1_451406_452819_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP048605.1_453375_453585_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP048605.1_454039_454666_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP048605.1_454686_456789_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP048605.1_456801_457440_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP048605.1_457503_458172_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP048605.1_458168_458954_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP048605.1_458957_459770_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP048605.1_459781_461386_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP048605.1_461511_461817_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP048605.1_462389_463646_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP048605.1_463686_465060_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP048605.1_465274_465916_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP048605.1_465955_467104_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP048605.1_467394_468606_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP048605.1_468718_469651_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP048605.1_469647_470673_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP048605.1_470971_471061_+	NA	NA|390aa|down_8|NZ_CP048605.1_471226_472396_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP048605.1_472541_473123_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_010669025.1_ASM1066902v1	NZ_CP048605	Escherichia coli strain PapRG-06-5 chromosome, complete genome	3	1146918-1147009	3	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	NA|70aa|up_9|NZ_CP048605.1_1136168_1136378_-,NA	NA|70aa|up_9|NZ_CP048605.1_1136168_1136378_-	NA	NA|1321aa|up_8|NZ_CP048605.1_1136432_1140395_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP048605.1_1140434_1141073_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP048605.1_1141360_1142452_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP048605.1_1142451_1143144_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP048605.1_1143155_1143542_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP048605.1_1143549_1144350_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP048605.1_1144359_1144950_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP048605.1_1144960_1145455_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP048605.1_1145475_1146804_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP048605.1_1147432_1148029_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP048605.1_1148049_1148277_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP048605.1_1148314_1149556_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP048605.1_1149848_1151105_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP048605.1_1151365_1152286_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP048605.1_1152285_1152591_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP048605.1_1152742_1153342_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP048605.1_1153338_1155885_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP048605.1_1155884_1157057_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP048605.1_1157186_1157879_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_010669025.1_ASM1066902v1	NZ_CP048605	Escherichia coli strain PapRG-06-5 chromosome, complete genome	4	2036692-2036790	4	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	Orphan	AGCGTCGCATCAGGCATCCGCGCACAATT	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	NA,NA	NA|415aa|up_9|NZ_CP048605.1_2027369_2028614_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_8|NZ_CP048605.1_2028705_2029164_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_7|NZ_CP048605.1_2029424_2030882_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|123aa|up_6|NZ_CP048605.1_2030938_2031307_-	PRK08179, prfH, peptide chain release factor-like protein; Reviewed	NA|151aa|up_5|NZ_CP048605.1_2031792_2032245_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|133aa|up_4|NZ_CP048605.1_2032254_2032653_-	PRK09885, PRK09885, type II toxin-antitoxin system YafO family toxin	NA|98aa|up_3|NZ_CP048605.1_2032655_2032949_-	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN	NA|352aa|up_2|NZ_CP048605.1_2033000_2034056_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|262aa|up_1|NZ_CP048605.1_2034126_2034912_-	PRK06778, PRK06778, hypothetical protein; Validated	NA|580aa|up_0|NZ_CP048605.1_2034856_2036596_+	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|250aa|down_0|NZ_CP048605.1_2037461_2038211_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|87aa|down_1|NZ_CP048605.1_2038420_2038681_+	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair]	NA|93aa|down_2|NZ_CP048605.1_2038683_2038962_+	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown]	NA|247aa|down_3|NZ_CP048605.1_2039117_2039858_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_4|NZ_CP048605.1_2039828_2040596_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|193aa|down_5|NZ_CP048605.1_2040801_2041380_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|815aa|down_6|NZ_CP048605.1_2041619_2044064_+	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|158aa|down_7|NZ_CP048605.1_2044106_2044580_-	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional	NA|257aa|down_8|NZ_CP048605.1_2044733_2045504_+	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional	NA|379aa|down_9|NZ_CP048605.1_2045543_2046680_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated
GCF_010669025.1_ASM1066902v1	NZ_CP048605	Escherichia coli strain PapRG-06-5 chromosome, complete genome	5	2325431-2325566	1	PILER-CR	no		DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	Orphan	TGAATCACCAATATTGAAAA	20	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	NA,NA	NA|105aa|up_9|NZ_CP048605.1_2316806_2317121_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|NZ_CP048605.1_2317123_2317357_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|160aa|up_7|NZ_CP048605.1_2317442_2317922_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP048605.1_2318113_2319976_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP048605.1_2319968_2320499_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP048605.1_2320606_2321938_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP048605.1_2321995_2322283_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP048605.1_2322279_2323566_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP048605.1_2323616_2324558_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP048605.1_2324572_2325343_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP048605.1_2325816_2327331_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP048605.1_2327361_2328504_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP048605.1_2328632_2329850_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP048605.1_2329923_2331477_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP048605.1_2331585_2332371_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP048605.1_2332376_2332967_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP048605.1_2333085_2333481_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP048605.1_2333741_2336963_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP048605.1_2336980_2338129_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP048605.1_2338584_2339406_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_010669025.1_ASM1066902v1	NZ_CP048605	Escherichia coli strain PapRG-06-5 chromosome, complete genome	6	2539443-2539592	5	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	NA,NA	NA|340aa|up_9|NZ_CP048605.1_2527636_2528656_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|188aa|up_8|NZ_CP048605.1_2528659_2529223_-	PRK09825, idnK, gluconokinase	NA|344aa|up_7|NZ_CP048605.1_2529439_2530471_+	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|255aa|up_6|NZ_CP048605.1_2530494_2531259_+	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|440aa|up_5|NZ_CP048605.1_2531320_2532640_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|333aa|up_4|NZ_CP048605.1_2532706_2533705_+	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|501aa|up_3|NZ_CP048605.1_2533782_2535285_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP048605.1_2535445_2536528_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP048605.1_2536527_2537628_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP048605.1_2537894_2539406_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP048605.1_2539759_2540203_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP048605.1_2540202_2543058_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP048605.1_2543113_2544310_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP048605.1_2544502_2545006_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP048605.1_2545051_2545468_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|338aa|down_5|NZ_CP048605.1_2545629_2546643_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|NZ_CP048605.1_2548632_2549085_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_7|NZ_CP048605.1_2549229_2549823_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_8|NZ_CP048605.1_2549893_2550607_+	PRK12742, PRK12742, SDR family oxidoreductase	NA|132aa|down_9|NZ_CP048605.1_2550737_2551133_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
GCF_010669025.1_ASM1066902v1	NZ_CP048605	Escherichia coli strain PapRG-06-5 chromosome, complete genome	7	4229979-4230678	2,6,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	Orphan	GAGTTCCCCGCGCTAGCGGGGATAAACCG,GAGTTCCCCGCGCTAGCGGGGATAAACCG,GAGTTCCCCGCGCTAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	11,11,11	11	Orphan	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	NA,NA	NA|83aa|up_9|NZ_CP048605.1_4220468_4220717_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP048605.1_4220716_4221052_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP048605.1_4221122_4221914_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP048605.1_4222141_4223779_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP048605.1_4223866_4225165_+	PRK00077, eno, enolase; Provisional	NA|301aa|up_4|NZ_CP048605.1_4225224_4226127_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP048605.1_4226123_4227272_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|298aa|up_2|NZ_CP048605.1_4227286_4228180_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|201aa|up_1|NZ_CP048605.1_4228193_4228796_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP048605.1_4228968_4229640_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP048605.1_4231315_4232794_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP048605.1_4232820_4234098_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP048605.1_4234416_4235202_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP048605.1_4235271_4236726_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP048605.1_4236747_4238157_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP048605.1_4238134_4238914_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP048605.1_4238910_4239771_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP048605.1_4239918_4240494_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP048605.1_4240510_4240771_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP048605.1_4240761_4242033_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_010669025.1_ASM1066902v1	NZ_CP048605	Escherichia coli strain PapRG-06-5 chromosome, complete genome	8	4766249-4766366	7	CRISPRCasFinder	no		DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,WYL,c2c9_V-U4,PD-DExK,csa3	NA|357aa|up_5|NZ_CP048605.1_4760228_4761299_-,NA	NA|420aa|up_9|NZ_CP048605.1_4754415_4755675_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_8|NZ_CP048605.1_4755664_4757293_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_7|NZ_CP048605.1_4757565_4758924_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_6|NZ_CP048605.1_4758928_4760005_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_5|NZ_CP048605.1_4760228_4761299_-	NA	NA|293aa|up_4|NZ_CP048605.1_4761762_4762641_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|397aa|up_3|NZ_CP048605.1_4762792_4763983_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|217aa|up_2|NZ_CP048605.1_4764063_4764714_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP048605.1_4764767_4765022_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP048605.1_4765021_4766152_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP048605.1_4766385_4768671_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP048605.1_4769366_4773119_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP048605.1_4773259_4773982_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP048605.1_4774128_4776756_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP048605.1_4776904_4778593_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP048605.1_4778589_4779213_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP048605.1_4779356_4783751_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP048605.1_4783751_4785401_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP048605.1_4785405_4786182_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|950aa|down_9|NZ_CP048605.1_4786456_4789306_+	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC
