assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010586985.1_ASM1058698v1	NZ_CP040861	Klebsiella pneumoniae strain Xen39 chromosome, complete genome	1	1548838-1548951	1	CRISPRCasFinder	no		cas3,csa3,DinG,WYL,DEDDh,RT	Orphan	GTGGCCTGATGAGGTGTTTGGGTGATG	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,WYL,DEDDh,RT	NA|77aa|up_9|NZ_CP040861.1_1544226_1544457_-,NA|145aa|up_8|NZ_CP040861.1_1544453_1544888_-,NA|75aa|up_7|NZ_CP040861.1_1544884_1545109_-,NA|100aa|up_6|NZ_CP040861.1_1545105_1545405_-,NA|95aa|down_0|NZ_CP040861.1_1549006_1549291_+,NA|99aa|down_1|NZ_CP040861.1_1549535_1549832_+,NA|68aa|down_2|NZ_CP040861.1_1549862_1550066_-,NA|42aa|down_3|NZ_CP040861.1_1550375_1550501_+,NA|95aa|down_7|NZ_CP040861.1_1552256_1552541_+	NA|77aa|up_9|NZ_CP040861.1_1544226_1544457_-	NA	NA|145aa|up_8|NZ_CP040861.1_1544453_1544888_-	NA	NA|75aa|up_7|NZ_CP040861.1_1544884_1545109_-	NA	NA|100aa|up_6|NZ_CP040861.1_1545105_1545405_-	NA	NA|289aa|up_5|NZ_CP040861.1_1545406_1546273_-	PRK07952, PRK07952, DNA replication protein DnaC; Validated	NA|285aa|up_4|NZ_CP040861.1_1546257_1547112_-	pfam04492, Phage_rep_O, Bacteriophage replication protein O	NA|85aa|up_3|NZ_CP040861.1_1547188_1547443_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|107aa|up_2|NZ_CP040861.1_1547442_1547763_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|78aa|up_1|NZ_CP040861.1_1547802_1548036_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|230aa|up_0|NZ_CP040861.1_1548140_1548830_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|95aa|down_0|NZ_CP040861.1_1549006_1549291_+	NA	NA|99aa|down_1|NZ_CP040861.1_1549535_1549832_+	NA	NA|68aa|down_2|NZ_CP040861.1_1549862_1550066_-	NA	NA|42aa|down_3|NZ_CP040861.1_1550375_1550501_+	NA	NA|69aa|down_4|NZ_CP040861.1_1550493_1550700_+	PRK11354, kil, FtsZ inhibitor protein; Reviewed	NA|173aa|down_5|NZ_CP040861.1_1550758_1551277_+	PHA00280, PHA00280, putative NHN endonuclease	NA|323aa|down_6|NZ_CP040861.1_1551280_1552249_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|95aa|down_7|NZ_CP040861.1_1552256_1552541_+	NA	NA|282aa|down_8|NZ_CP040861.1_1552556_1553402_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|down_9|NZ_CP040861.1_1553398_1554079_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain
GCF_010586985.1_ASM1058698v1	NZ_CP040861	Klebsiella pneumoniae strain Xen39 chromosome, complete genome	2	4811649-4811756	2	CRISPRCasFinder	no		cas3,csa3,DinG,WYL,DEDDh,RT	Orphan	CGGCACAAACGCCGAATGCAAACGGCACAAACGCCGAAT	39	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,WYL,DEDDh,RT	NA|75aa|up_9|NZ_CP040861.1_4806877_4807102_-,NA|74aa|up_8|NZ_CP040861.1_4807333_4807555_-,NA|65aa|up_6|NZ_CP040861.1_4808393_4808588_+,NA|73aa|up_5|NZ_CP040861.1_4808553_4808772_-,NA|135aa|up_3|NZ_CP040861.1_4809220_4809625_-,NA|132aa|down_0|NZ_CP040861.1_4812279_4812675_+,NA|212aa|down_2|NZ_CP040861.1_4813672_4814308_+,NA|90aa|down_4|NZ_CP040861.1_4815126_4815396_+,NA|257aa|down_6|NZ_CP040861.1_4816226_4816997_+,NA|80aa|down_9|NZ_CP040861.1_4818378_4818618_+	NA|75aa|up_9|NZ_CP040861.1_4806877_4807102_-	NA	NA|74aa|up_8|NZ_CP040861.1_4807333_4807555_-	NA	NA|98aa|up_7|NZ_CP040861.1_4807625_4807919_-	pfam06301, Lambda_Kil, Bacteriophage lambda Kil protein	NA|65aa|up_6|NZ_CP040861.1_4808393_4808588_+	NA	NA|73aa|up_5|NZ_CP040861.1_4808553_4808772_-	NA	NA|70aa|up_4|NZ_CP040861.1_4808982_4809192_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|135aa|up_3|NZ_CP040861.1_4809220_4809625_-	NA	NA|134aa|up_2|NZ_CP040861.1_4809769_4810171_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|84aa|up_1|NZ_CP040861.1_4810279_4810531_+	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|142aa|up_0|NZ_CP040861.1_4810534_4810960_+	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|132aa|down_0|NZ_CP040861.1_4812279_4812675_+	NA	NA|264aa|down_1|NZ_CP040861.1_4812888_4813680_+	TIGR03734, PRTRC_parB, PRTRC system ParB family protein	NA|212aa|down_2|NZ_CP040861.1_4813672_4814308_+	NA	NA|123aa|down_3|NZ_CP040861.1_4814307_4814676_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|90aa|down_4|NZ_CP040861.1_4815126_4815396_+	NA	NA|198aa|down_5|NZ_CP040861.1_4815636_4816230_+	pfam05766, NinG, Bacteriophage Lambda NinG protein	NA|257aa|down_6|NZ_CP040861.1_4816226_4816997_+	NA	NA|220aa|down_7|NZ_CP040861.1_4816993_4817653_+	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam)	NA|193aa|down_8|NZ_CP040861.1_4817649_4818228_+	pfam06576, DUF1133, Protein of unknown function (DUF1133)	NA|80aa|down_9|NZ_CP040861.1_4818378_4818618_+	NA
GCF_010586985.1_ASM1058698v1	NZ_CP040861	Klebsiella pneumoniae strain Xen39 chromosome, complete genome	3	4962376-4962470	3	CRISPRCasFinder	no		cas3,csa3,DinG,WYL,DEDDh,RT	Orphan	GTGCAGGAGATTCACCAGGGGGTAGTGCA	29	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,WYL,DEDDh,RT	NA|173aa|up_9|NZ_CP040861.1_4957159_4957678_-,NA|147aa|up_8|NZ_CP040861.1_4957718_4958159_-,NA|41aa|up_7|NZ_CP040861.1_4958155_4958278_-,NA|86aa|up_6|NZ_CP040861.1_4958345_4958603_-,NA|92aa|up_5|NZ_CP040861.1_4958606_4958882_-,NA|70aa|up_4|NZ_CP040861.1_4958922_4959132_-,NA|88aa|up_3|NZ_CP040861.1_4959244_4959508_-,NA|86aa|down_4|NZ_CP040861.1_4966494_4966752_+,NA|149aa|down_5|NZ_CP040861.1_4966657_4967104_-	NA|173aa|up_9|NZ_CP040861.1_4957159_4957678_-	NA	NA|147aa|up_8|NZ_CP040861.1_4957718_4958159_-	NA	NA|41aa|up_7|NZ_CP040861.1_4958155_4958278_-	NA	NA|86aa|up_6|NZ_CP040861.1_4958345_4958603_-	NA	NA|92aa|up_5|NZ_CP040861.1_4958606_4958882_-	NA	NA|70aa|up_4|NZ_CP040861.1_4958922_4959132_-	NA	NA|88aa|up_3|NZ_CP040861.1_4959244_4959508_-	NA	NA|69aa|up_2|NZ_CP040861.1_4960160_4960367_-	TIGR03814, Glutaminase_1, glutaminase A	NA|239aa|up_1|NZ_CP040861.1_4960536_4961253_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|63aa|up_0|NZ_CP040861.1_4961925_4962114_+	pfam13973, DUF4222, Domain of unknown function (DUF4222)	NA|293aa|down_0|NZ_CP040861.1_4962952_4963831_+	PRK07952, PRK07952, DNA replication protein DnaC; Validated	NA|460aa|down_1|NZ_CP040861.1_4963827_4965207_+	TIGR00665, DnaB, replicative DNA helicase	NA|123aa|down_2|NZ_CP040861.1_4965193_4965562_+	pfam05866, RusA, Endodeoxyribonuclease RusA	NA|261aa|down_3|NZ_CP040861.1_4965558_4966341_+	pfam03589, Antiterm, Antitermination protein	NA|86aa|down_4|NZ_CP040861.1_4966494_4966752_+	NA	NA|149aa|down_5|NZ_CP040861.1_4966657_4967104_-	NA	NA|349aa|down_6|NZ_CP040861.1_4967288_4968335_+	pfam00665, rve, Integrase core domain	NA|513aa|down_7|NZ_CP040861.1_4968698_4970237_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|116aa|down_8|NZ_CP040861.1_4970285_4970633_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|135aa|down_9|NZ_CP040861.1_4970629_4971034_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_010586985.1_ASM1058698v1	NZ_CP040861	Klebsiella pneumoniae strain Xen39 chromosome, complete genome	4	5199520-5200034	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,DinG,WYL,DEDDh,RT	Orphan	GTCTTCCCCACATGCGTGGGGGTGTTT,GTCTTCCCCACATGCGTGGGGGTGTTTC,GTCTTCCCCACATGCGTGGGGGTGTTTC	27,28,28	2	2	5199913-5199945|5199914-5199945	NZ_CP040862.1_204493-204525|NZ_CP040862.1_204494-204525	I-E,II-B:I-E,II-B:I-E,II-B	8,8,8	8	Orphan	cas3,csa3,DinG,WYL,DEDDh,RT	NA|79aa|up_3|NZ_CP040861.1_5195017_5195254_+,NA	NA|411aa|up_9|NZ_CP040861.1_5186451_5187684_-	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM	NA|145aa|up_8|NZ_CP040861.1_5188249_5188684_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|400aa|up_7|NZ_CP040861.1_5188799_5189999_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|54aa|up_6|NZ_CP040861.1_5191289_5191451_+	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|717aa|up_5|NZ_CP040861.1_5191493_5193644_-	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|360aa|up_4|NZ_CP040861.1_5193890_5194970_-	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|79aa|up_3|NZ_CP040861.1_5195017_5195254_+	NA	NA|363aa|up_2|NZ_CP040861.1_5195272_5196361_+	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|590aa|up_1|NZ_CP040861.1_5196434_5198204_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_0|NZ_CP040861.1_5198196_5199267_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|346aa|down_0|NZ_CP040861.1_5200530_5201568_+	PHA02053, PHA02053, hypothetical protein	NA|228aa|down_1|NZ_CP040861.1_5201578_5202262_+	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|124aa|down_2|NZ_CP040861.1_5202322_5202694_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|252aa|down_3|NZ_CP040861.1_5203195_5203951_+	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|595aa|down_4|NZ_CP040861.1_5203953_5205738_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|447aa|down_5|NZ_CP040861.1_5205748_5207089_+	pfam00034, Cytochrom_C, Cytochrome c	NA|208aa|down_6|NZ_CP040861.1_5207172_5207796_+	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|220aa|down_7|NZ_CP040861.1_5207792_5208452_+	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|246aa|down_8|NZ_CP040861.1_5208501_5209239_+	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|77aa|down_9|NZ_CP040861.1_5209235_5209466_+	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]
