assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010443215.1_ASM1044321v1	NZ_CP048402	Pasteurella multocida strain HS_Canada1 chromosome, complete genome	1	30658-31815	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	cas9,cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	Type II-C,Type II-A, or Type II-C?,Type II-B, Type II-B	ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC,ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC,ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	36,36,36	1	1	31420-31449	NZ_CP048402.1_653812-653841	NA:NA:NA	17,17,17	17	TypeII-C,TypeII-A,orTypeII-C?,TypeII-B,TypeII-B	cas9,cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	NA,NA|232aa|down_1|NZ_CP048402.1_32383_33079_+,NA|75aa|down_2|NZ_CP048402.1_33203_33428_+	NA|404aa|up_9|NZ_CP048402.1_18744_19956_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|148aa|up_8|NZ_CP048402.1_19983_20427_+	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|1033aa|up_7|NZ_CP048402.1_20436_23535_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|355aa|up_6|NZ_CP048402.1_23593_24658_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|117aa|up_5|NZ_CP048402.1_24737_25088_+	TIGR00014, Putative_arsenate_reductase	NA|94aa|up_4|NZ_CP048402.1_25160_25442_+	COG3036, COG3036, Uncharacterized protein conserved in bacteria [Function unknown]	NA|98aa|up_3|NZ_CP048402.1_25446_25740_+	pfam17347, DUF5377, Family of unknown function (DUF5377)	cas9|1057aa|up_2|NZ_CP048402.1_25964_29135_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|305aa|up_1|NZ_CP048402.1_29190_30105_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|109aa|up_0|NZ_CP048402.1_30097_30424_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|136aa|down_0|NZ_CP048402.1_31841_32249_+	pfam05939, Phage_min_tail, Phage minor tail protein	NA|232aa|down_1|NZ_CP048402.1_32383_33079_+	NA	NA|75aa|down_2|NZ_CP048402.1_33203_33428_+	NA	NA|458aa|down_3|NZ_CP048402.1_33556_34930_-	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|258aa|down_4|NZ_CP048402.1_34945_35719_-	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|336aa|down_5|NZ_CP048402.1_35719_36727_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|383aa|down_6|NZ_CP048402.1_36834_37983_+	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|263aa|down_7|NZ_CP048402.1_38068_38857_-	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane]	NA|481aa|down_8|NZ_CP048402.1_39609_41052_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|715aa|down_9|NZ_CP048402.1_41500_43645_+	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional
GCF_010443215.1_ASM1044321v1	NZ_CP048402	Pasteurella multocida strain HS_Canada1 chromosome, complete genome	2	33409-33497	2	CRISPRCasFinder	no	cas9,cas1,cas2	cas9,cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	Type II-C,Type II-A, or Type II-C?,Type II-B, Type II-B	ATTGTAGCACTGCGAAATGAGAG	23	0	0	NA	NA	NA	1	1	TypeII-C,TypeII-A,orTypeII-C?,TypeII-B,TypeII-B	cas9,cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	NA|232aa|up_0|NZ_CP048402.1_32383_33079_+,NA	NA|1033aa|up_9|NZ_CP048402.1_20436_23535_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|355aa|up_8|NZ_CP048402.1_23593_24658_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|117aa|up_7|NZ_CP048402.1_24737_25088_+	TIGR00014, Putative_arsenate_reductase	NA|94aa|up_6|NZ_CP048402.1_25160_25442_+	COG3036, COG3036, Uncharacterized protein conserved in bacteria [Function unknown]	NA|98aa|up_5|NZ_CP048402.1_25446_25740_+	pfam17347, DUF5377, Family of unknown function (DUF5377)	cas9|1057aa|up_4|NZ_CP048402.1_25964_29135_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|305aa|up_3|NZ_CP048402.1_29190_30105_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|109aa|up_2|NZ_CP048402.1_30097_30424_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|136aa|up_1|NZ_CP048402.1_31841_32249_+	pfam05939, Phage_min_tail, Phage minor tail protein	NA|232aa|up_0|NZ_CP048402.1_32383_33079_+	NA	NA|458aa|down_0|NZ_CP048402.1_33556_34930_-	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|258aa|down_1|NZ_CP048402.1_34945_35719_-	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|336aa|down_2|NZ_CP048402.1_35719_36727_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|383aa|down_3|NZ_CP048402.1_36834_37983_+	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|263aa|down_4|NZ_CP048402.1_38068_38857_-	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane]	NA|481aa|down_5|NZ_CP048402.1_39609_41052_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|715aa|down_6|NZ_CP048402.1_41500_43645_+	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|299aa|down_7|NZ_CP048402.1_43728_44625_+	COG4785, NlpI, Lipoprotein NlpI, contains TPR repeats [General function prediction only]	NA|611aa|down_8|NZ_CP048402.1_44732_46565_+	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional	NA|283aa|down_9|NZ_CP048402.1_46664_47513_-	PRK06096, PRK06096, molybdenum transport protein ModD; Provisional
GCF_010443215.1_ASM1044321v1	NZ_CP048402	Pasteurella multocida strain HS_Canada1 chromosome, complete genome	3	300573-301080	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2	cas9,cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	Type I-F	GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA	28,28,28	0	0	NA	NA	NA:NA:NA	7,8,8	8	TypeI-F	cas9,cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	NA,NA|197aa|down_3|NZ_CP048402.1_307564_308155_+	NA|172aa|up_9|NZ_CP048402.1_286319_286835_+	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ	NA|1072aa|up_8|NZ_CP048402.1_286876_290092_+	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|90aa|up_7|NZ_CP048402.1_290258_290528_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|371aa|up_6|NZ_CP048402.1_290665_291778_-	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|683aa|up_5|NZ_CP048402.1_291959_294008_+	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|720aa|up_4|NZ_CP048402.1_294141_296301_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	cas8f|445aa|up_3|NZ_CP048402.1_296531_297866_+	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	cas5f|328aa|up_2|NZ_CP048402.1_297875_298859_+	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	cas7f|336aa|up_1|NZ_CP048402.1_298861_299869_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|187aa|up_0|NZ_CP048402.1_299871_300432_+	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	cas1|327aa|down_0|NZ_CP048402.1_301228_302209_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1107aa|down_1|NZ_CP048402.1_302189_305510_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	NA|619aa|down_2|NZ_CP048402.1_305567_307424_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|197aa|down_3|NZ_CP048402.1_307564_308155_+	NA	NA|268aa|down_4|NZ_CP048402.1_308217_309021_-	PRK10757, PRK10757, inositol-1-monophosphatase	NA|239aa|down_5|NZ_CP048402.1_309235_309952_+	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|155aa|down_6|NZ_CP048402.1_310030_310495_+	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|405aa|down_7|NZ_CP048402.1_310542_311757_+	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|129aa|down_8|NZ_CP048402.1_311988_312375_+	PRK11325, PRK11325, scaffold protein; Provisional	NA|108aa|down_9|NZ_CP048402.1_312444_312768_+	TIGR02011, Protein_yfhF
GCF_010443215.1_ASM1044321v1	NZ_CP048402	Pasteurella multocida strain HS_Canada1 chromosome, complete genome	4	1542776-1545680	4,3,3,4	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas3	cas9,cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	Unclear	TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAACT,TTTCTAAGCTGCCTATACGGCAGTTAAC	28,28,29,28	0	0	NA	NA	I-F:I-F:I-F:I-F	48,48,45,45	48	Unclear	cas9,cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	NA,NA	NA|529aa|up_9|NZ_CP048402.1_1530882_1532469_-	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|456aa|up_8|NZ_CP048402.1_1532827_1534195_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|204aa|up_7|NZ_CP048402.1_1534222_1534834_-	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|309aa|up_6|NZ_CP048402.1_1535019_1535946_+	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|481aa|up_5|NZ_CP048402.1_1535983_1537426_+	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|340aa|up_4|NZ_CP048402.1_1537451_1538471_+	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|475aa|up_3|NZ_CP048402.1_1538699_1540124_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|136aa|up_2|NZ_CP048402.1_1540239_1540647_+	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|349aa|up_1|NZ_CP048402.1_1540715_1541762_+	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|322aa|up_0|NZ_CP048402.1_1541758_1542724_+	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	cas3|443aa|down_0|NZ_CP048402.1_1545828_1547157_-	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|238aa|down_1|NZ_CP048402.1_1547268_1547982_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|235aa|down_2|NZ_CP048402.1_1548029_1548734_-	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|968aa|down_3|NZ_CP048402.1_1549009_1551913_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_4|NZ_CP048402.1_1551993_1552653_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|190aa|down_5|NZ_CP048402.1_1552716_1553286_+	pfam04220, YihI, Der GTPase activator (YihI)	NA|143aa|down_6|NZ_CP048402.1_1553291_1553720_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|456aa|down_7|NZ_CP048402.1_1553743_1555111_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|223aa|down_8|NZ_CP048402.1_1555151_1555820_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|112aa|down_9|NZ_CP048402.1_1555915_1556251_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
