assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010365265.1_ASM1036526v1	NZ_CP048280	Rhizobium leguminosarum bv. viciae 248 chromosome, complete genome	1	595977-596064	1	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh	Orphan	AATGCATGCCGCCCGGAAGTGTGAAGCGGTT	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,PD-DExK	NA|86aa|up_1|NZ_CP048280.1_593188_593446_+,NA	NA|574aa|up_9|NZ_CP048280.1_584947_586669_+	cd17546, REC_hyHK_CKI1_RcsC-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinases/response regulators similar to Arabidopsis thaliana CKI1 and Escherichia coli RcsC	NA|455aa|up_8|NZ_CP048280.1_586822_588187_+	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]	NA|202aa|up_7|NZ_CP048280.1_588240_588846_-	pfam05239, PRC, PRC-barrel domain	NA|296aa|up_6|NZ_CP048280.1_589067_589955_-	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism]	NA|214aa|up_5|NZ_CP048280.1_589951_590593_-	PRK09140, PRK09140, 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed	NA|306aa|up_4|NZ_CP048280.1_590606_591524_-	COG3734, DgoK, 2-keto-3-deoxy-galactonokinase [Carbohydrate transport and metabolism]	NA|254aa|up_3|NZ_CP048280.1_591523_592285_-	cd05233, SDR_c, classical (c) SDRs	NA|266aa|up_2|NZ_CP048280.1_592394_593192_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|86aa|up_1|NZ_CP048280.1_593188_593446_+	NA	NA|245aa|up_0|NZ_CP048280.1_593445_594180_+	TIGR03541, reg_near_HchA, LuxR family transcriptional regulatory, chaperone HchA-associated	NA|326aa|down_0|NZ_CP048280.1_596378_597356_+	cd12837, EcCorA-like_u1, uncharacterized subgroup of the Escherichia coli Mg2+ transporter CorA_like subfamily	NA|633aa|down_1|NZ_CP048280.1_597374_599273_+	COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	NA|410aa|down_2|NZ_CP048280.1_599651_600881_+	COG3773, SleB, Cell wall hydrolyses involved in spore germination [Cell envelope biogenesis, outer membrane]	NA|111aa|down_3|NZ_CP048280.1_601152_601485_+	COG5336, COG5336, Uncharacterized protein conserved in bacteria [Function unknown]	NA|251aa|down_4|NZ_CP048280.1_601547_602300_+	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|76aa|down_5|NZ_CP048280.1_602367_602595_+	PRK07558, PRK07558, F0F1 ATP synthase subunit C; Validated	NA|208aa|down_6|NZ_CP048280.1_602672_603296_+	PRK09174, PRK09174, F0F1 ATP synthase subunit B	NA|164aa|down_7|NZ_CP048280.1_603299_603791_+	PRK09173, PRK09173, F0F1 ATP synthase subunit B; Validated	NA|230aa|down_8|NZ_CP048280.1_604319_605009_-	PRK00015, rnhB, ribonuclease HII; Validated	NA|386aa|down_9|NZ_CP048280.1_605283_606441_-	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B
GCF_010365265.1_ASM1036526v1	NZ_CP048280	Rhizobium leguminosarum bv. viciae 248 chromosome, complete genome	2	1066190-1066303	2	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh	Orphan	CGAACGCCCGGAGCGCAAGCGCAGGGCCGGGGCG	34	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,PD-DExK	NA|122aa|up_9|NZ_CP048280.1_1055524_1055890_-,NA|111aa|up_1|NZ_CP048280.1_1064989_1065322_+,NA	NA|122aa|up_9|NZ_CP048280.1_1055524_1055890_-	NA	NA|794aa|up_8|NZ_CP048280.1_1056294_1058676_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|157aa|up_7|NZ_CP048280.1_1059137_1059608_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|169aa|up_6|NZ_CP048280.1_1059681_1060188_+	COG0645, COG0645, Predicted kinase [General function prediction only]	NA|506aa|up_5|NZ_CP048280.1_1060293_1061811_+	cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands	NA|156aa|up_4|NZ_CP048280.1_1061816_1062284_-	pfam07883, Cupin_2, Cupin domain	NA|273aa|up_3|NZ_CP048280.1_1062703_1063522_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|348aa|up_2|NZ_CP048280.1_1063851_1064895_-	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family	NA|111aa|up_1|NZ_CP048280.1_1064989_1065322_+	NA	NA|296aa|up_0|NZ_CP048280.1_1065243_1066131_+	PRK13356, PRK13356, branched-chain amino acid aminotransferase	NA|301aa|down_0|NZ_CP048280.1_1066549_1067452_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|419aa|down_1|NZ_CP048280.1_1067590_1068847_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|540aa|down_2|NZ_CP048280.1_1068945_1070565_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|402aa|down_3|NZ_CP048280.1_1070595_1071801_+	cd07302, CHD, cyclase homology domain	NA|278aa|down_4|NZ_CP048280.1_1071950_1072784_+	PRK00768, nadE, ammonia-dependent NAD(+) synthetase	NA|228aa|down_5|NZ_CP048280.1_1072826_1073510_-	PRK10542, PRK10542, glutathionine S-transferase; Provisional	NA|207aa|down_6|NZ_CP048280.1_1073626_1074247_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|413aa|down_7|NZ_CP048280.1_1074344_1075583_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|115aa|down_8|NZ_CP048280.1_1075983_1076328_+	pfam12680, SnoaL_2, SnoaL-like domain	NA|244aa|down_9|NZ_CP048280.1_1076359_1077091_-	pfam01925, TauE, Sulfite exporter TauE/SafE
GCF_010365265.1_ASM1036526v1	NZ_CP048280	Rhizobium leguminosarum bv. viciae 248 chromosome, complete genome	3	1757698-1757789	3	CRISPRCasFinder	no	csa3	csa3,cas3,WYL,DEDDh	Type I-A	AAGAAGGCCGCACCGAAGAAGAAGGCTGC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,PD-DExK	NA|156aa|up_5|NZ_CP048280.1_1750671_1751139_+,NA	NA|116aa|up_9|NZ_CP048280.1_1746415_1746763_+	COG1862, YajC, Preprotein translocase subunit YajC [Intracellular trafficking and secretion]	NA|847aa|up_8|NZ_CP048280.1_1746808_1749349_+	PRK14726, PRK14726, protein translocase subunit SecDF	NA|129aa|up_7|NZ_CP048280.1_1749353_1749740_+	COG3737, COG3737, Uncharacterized conserved protein [Function unknown]	NA|286aa|up_6|NZ_CP048280.1_1749742_1750600_+	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|156aa|up_5|NZ_CP048280.1_1750671_1751139_+	NA	NA|478aa|up_4|NZ_CP048280.1_1751228_1752662_-	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed	NA|48aa|up_3|NZ_CP048280.1_1752755_1752899_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|49aa|up_2|NZ_CP048280.1_1753194_1753341_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|368aa|up_1|NZ_CP048280.1_1754212_1755316_+	COG4872, COG4872, Predicted membrane protein [Function unknown]	NA|197aa|up_0|NZ_CP048280.1_1755312_1755903_+	pfam14345, GDYXXLXY, GDYXXLXY protein	NA|141aa|down_0|NZ_CP048280.1_1758003_1758426_+	COG3631, COG3631, Ketosteroid isomerase-related protein [General function prediction only]	NA|590aa|down_1|NZ_CP048280.1_1758552_1760322_-	smart00729, Elp3, Elongator protein 3, MiaB family, Radical SAM	NA|268aa|down_2|NZ_CP048280.1_1760481_1761285_-	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1	NA|254aa|down_3|NZ_CP048280.1_1761422_1762183_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|469aa|down_4|NZ_CP048280.1_1762196_1763603_-	PRK05249, PRK05249, Si-specific NAD(P)(+) transhydrogenase	NA|155aa|down_5|NZ_CP048280.1_1763864_1764329_-	cd08900, SRPBCC_CalC_Aha1-like_7, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	csa3|115aa|down_6|NZ_CP048280.1_1764331_1764676_-	pfam12840, HTH_20, Helix-turn-helix domain	NA|396aa|down_7|NZ_CP048280.1_1764751_1765939_-	pfam01070, FMN_dh, FMN-dependent dehydrogenase	NA|276aa|down_8|NZ_CP048280.1_1766139_1766967_-	PRK00024, PRK00024, DNA repair protein RadC	NA|279aa|down_9|NZ_CP048280.1_1766974_1767811_-	PRK05716, PRK05716, methionine aminopeptidase; Validated
GCF_010365265.1_ASM1036526v1	NZ_CP048280	Rhizobium leguminosarum bv. viciae 248 chromosome, complete genome	4	1888484-1888570	4	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh	Orphan	AGCAATTCCAGCAAAAGTGCGTAGCGGTTT	30	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,PD-DExK	NA,NA|73aa|down_5|NZ_CP048280.1_1893881_1894100_-,NA|67aa|down_7|NZ_CP048280.1_1896470_1896671_-,NA|76aa|down_8|NZ_CP048280.1_1897239_1897467_+	NA|81aa|up_9|NZ_CP048280.1_1878593_1878836_+	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|442aa|up_8|NZ_CP048280.1_1878913_1880239_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|282aa|up_7|NZ_CP048280.1_1880577_1881423_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|196aa|up_6|NZ_CP048280.1_1881443_1882031_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|479aa|up_5|NZ_CP048280.1_1882299_1883736_+	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|105aa|up_4|NZ_CP048280.1_1883738_1884053_+	pfam11011, DUF2849, Protein of unknown function (DUF2849)	NA|557aa|up_3|NZ_CP048280.1_1884061_1885732_+	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]	NA|171aa|up_2|NZ_CP048280.1_1885742_1886255_+	COG3749, COG3749, Uncharacterized protein conserved in bacteria [Function unknown]	NA|404aa|up_1|NZ_CP048280.1_1886293_1887505_+	PRK07494, PRK07494, UbiH/UbiF family hydroxylase	NA|321aa|up_0|NZ_CP048280.1_1887472_1888435_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|312aa|down_0|NZ_CP048280.1_1888661_1889597_-	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain	NA|163aa|down_1|NZ_CP048280.1_1889806_1890295_-	cd02219, cupin_YjlB-like, Bacillus subtilis YjlB and related proteins, cupin domain	NA|264aa|down_2|NZ_CP048280.1_1890592_1891384_-	cd05233, SDR_c, classical (c) SDRs	NA|257aa|down_3|NZ_CP048280.1_1891496_1892267_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|250aa|down_4|NZ_CP048280.1_1892508_1893258_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|73aa|down_5|NZ_CP048280.1_1893881_1894100_-	NA	NA|643aa|down_6|NZ_CP048280.1_1894124_1896053_-	COG5616, COG5616, Predicted integral membrane protein [Function unknown]	NA|67aa|down_7|NZ_CP048280.1_1896470_1896671_-	NA	NA|76aa|down_8|NZ_CP048280.1_1897239_1897467_+	NA	NA|68aa|down_9|NZ_CP048280.1_1897636_1897840_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]
