assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010319905.2_ASM1031990v2	NZ_AP022378	Citrobacter portucalensis strain IOMTU157	1	303572-303650	1	CRISPRCasFinder	no		cas3,csa3,WYL,PD-DExK,DEDDh,DinG	Orphan	TTAAAATCAGTATCAAATGATTT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,PD-DExK,DEDDh,DinG	NA|295aa|up_2|NZ_AP022378.1_301516_302401_+,NA	NA|596aa|up_9|NZ_AP022378.1_294738_296526_+	pfam10145, PhageMin_Tail, Phage-related minor tail protein	NA|423aa|up_8|NZ_AP022378.1_296525_297794_+	pfam07157, DNA_circ_N, DNA circularisation protein N-terminus	NA|368aa|up_7|NZ_AP022378.1_297793_298897_+	COG4379, COG4379, Mu-like prophage tail protein gpP [General function prediction only]	NA|181aa|up_6|NZ_AP022378.1_298887_299430_+	pfam06890, Phage_Mu_Gp45, Bacteriophage Mu Gp45 protein	NA|151aa|up_5|NZ_AP022378.1_299426_299879_+	pfam07409, GP46, Phage protein GP46	NA|359aa|up_4|NZ_AP022378.1_299868_300945_+	pfam04865, Baseplate_J, Baseplate J-like protein	NA|192aa|up_3|NZ_AP022378.1_300929_301505_+	COG3778, COG3778, Uncharacterized protein conserved in bacteria [Function unknown]	NA|295aa|up_2|NZ_AP022378.1_301516_302401_+	NA	NA|136aa|up_1|NZ_AP022378.1_302400_302808_+	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK	NA|190aa|up_0|NZ_AP022378.1_302957_303527_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|394aa|down_0|NZ_AP022378.1_303789_304971_-	PRK03906, PRK03906, mannonate dehydratase; Provisional	NA|342aa|down_1|NZ_AP022378.1_304991_306017_-	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family	NA|430aa|down_2|NZ_AP022378.1_305988_307278_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|492aa|down_3|NZ_AP022378.1_307836_309312_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|515aa|down_4|NZ_AP022378.1_309308_310853_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|560aa|down_5|NZ_AP022378.1_310849_312529_+	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|520aa|down_6|NZ_AP022378.1_312525_314085_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|192aa|down_7|NZ_AP022378.1_314081_314657_+	pfam04309, G3P_antiterm, Glycerol-3-phosphate responsive antiterminator	NA|105aa|down_8|NZ_AP022378.1_314673_314988_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|389aa|down_9|NZ_AP022378.1_315020_316187_+	cd08193, HVD, 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor
GCF_010319905.2_ASM1031990v2	NZ_AP022378	Citrobacter portucalensis strain IOMTU157	2	694046-694146	2	CRISPRCasFinder	no		cas3,csa3,WYL,PD-DExK,DEDDh,DinG	Orphan	ACTCGTAGGCCTGATAAGCGAAGCGCATCAGGC	33	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,PD-DExK,DEDDh,DinG	NA,NA	NA|150aa|up_9|NZ_AP022378.1_681509_681959_-	PRK10202, ebgC, beta-galactosidase subunit beta	NA|1031aa|up_8|NZ_AP022378.1_681955_685048_-	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed	NA|328aa|up_7|NZ_AP022378.1_685255_686239_-	PRK10339, PRK10339, DNA-binding transcriptional repressor EbgR; Provisional	NA|111aa|up_6|NZ_AP022378.1_686448_686781_+	PRK10089, PRK10089, chaperone CsaA	NA|460aa|up_5|NZ_AP022378.1_686858_688238_-	PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional	NA|507aa|up_4|NZ_AP022378.1_688668_690189_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|225aa|up_3|NZ_AP022378.1_690242_690917_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|258aa|up_2|NZ_AP022378.1_691152_691926_+	COG2375, ViuB, Siderophore-interacting protein [Inorganic ion transport and metabolism]	NA|283aa|up_1|NZ_AP022378.1_691926_692775_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|385aa|up_0|NZ_AP022378.1_692842_693997_+	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|553aa|down_0|NZ_AP022378.1_694155_695814_-	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent	NA|366aa|down_1|NZ_AP022378.1_696375_697473_+	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|642aa|down_2|NZ_AP022378.1_697564_699490_+	PRK11388, PRK11388, DNA-binding transcriptional regulator DhaR; Provisional	NA|177aa|down_3|NZ_AP022378.1_699467_699998_-	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase	NA|118aa|down_4|NZ_AP022378.1_699998_700352_-	pfam02288, Dehydratase_MU, Dehydratase medium subunit	NA|388aa|down_5|NZ_AP022378.1_700368_701532_-	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase	NA|143aa|down_6|NZ_AP022378.1_701554_701983_-	pfam03928, Haem_degrading, Haem-degrading	NA|556aa|down_7|NZ_AP022378.1_702375_704043_+	pfam02286, Dehydratase_LU, Dehydratase large subunit	NA|195aa|down_8|NZ_AP022378.1_704054_704639_+	PRK15042, pduD, propanediol/glycerol family dehydratase medium subunit	NA|143aa|down_9|NZ_AP022378.1_704641_705070_+	pfam02287, Dehydratase_SU, Dehydratase small subunit
GCF_010319905.2_ASM1031990v2	NZ_AP022378	Citrobacter portucalensis strain IOMTU157	3	2231219-2231295	3	CRISPRCasFinder	no		cas3,csa3,WYL,PD-DExK,DEDDh,DinG	Orphan	TGTAGGCCTGATAAGCGTAGCGCA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,PD-DExK,DEDDh,DinG	NA,NA	NA|1355aa|up_9|NZ_AP022378.1_2211588_2215653_+	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional	NA|867aa|up_8|NZ_AP022378.1_2215649_2218250_+	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|468aa|up_7|NZ_AP022378.1_2218334_2219738_+	PRK10177, PRK10177, YchO/YchP family invasin	NA|217aa|up_6|NZ_AP022378.1_2219759_2220410_-	PRK10651, PRK10651, transcriptional regulator NarL; Provisional	NA|599aa|up_5|NZ_AP022378.1_2220402_2222199_-	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX	NA|464aa|up_4|NZ_AP022378.1_2222539_2223931_+	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional	NA|1248aa|up_3|NZ_AP022378.1_2224446_2228190_+	TIGR01580, Respiratory_nitrate_reductase_1_alpha_chain, respiratory nitrate reductase, alpha subunit	NA|513aa|up_2|NZ_AP022378.1_2228186_2229725_+	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion]	NA|237aa|up_1|NZ_AP022378.1_2229721_2230432_+	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone	NA|226aa|up_0|NZ_AP022378.1_2230431_2231109_+	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain	NA|281aa|down_0|NZ_AP022378.1_2231884_2232727_-	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|152aa|down_1|NZ_AP022378.1_2232782_2233238_-	PRK01617, PRK01617, hypothetical protein; Provisional	NA|304aa|down_2|NZ_AP022378.1_2233349_2234261_+	PRK10279, PRK10279, patatin-like phospholipase RssA	NA|338aa|down_3|NZ_AP022378.1_2234351_2235365_+	PRK10693, PRK10693, two-component system response regulator RssB	NA|303aa|down_4|NZ_AP022378.1_2235569_2236478_+	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU	NA|138aa|down_5|NZ_AP022378.1_2236614_2237028_-	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS	NA|206aa|down_6|NZ_AP022378.1_2237638_2238256_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|893aa|down_7|NZ_AP022378.1_2239275_2241954_-	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|216aa|down_8|NZ_AP022378.1_2242441_2243089_+	PRK11111, PRK11111, YchE family NAAT transporter	NA|544aa|down_9|NZ_AP022378.1_2243860_2245492_+	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional
GCF_010319905.2_ASM1031990v2	NZ_AP022378	Citrobacter portucalensis strain IOMTU157	4	4600834-4600952	4	CRISPRCasFinder	no		cas3,csa3,WYL,PD-DExK,DEDDh,DinG	Orphan	CGGCCTACATCGGTATGCTGGTCTTGTAGGCC	32	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,PD-DExK,DEDDh,DinG	NA,NA	NA|319aa|up_9|NZ_AP022378.1_4590478_4591435_-	TIGR03148, cyt_nit_nrfD, cytochrome c nitrite reductase, NrfD subunit	NA|224aa|up_8|NZ_AP022378.1_4591431_4592103_-	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|189aa|up_7|NZ_AP022378.1_4592099_4592666_-	PRK11659, PRK11659, cytochrome c nitrite reductase pentaheme subunit; Provisional	NA|479aa|up_6|NZ_AP022378.1_4592710_4594147_-	PRK11125, nrfA, ammonia-forming cytochrome c nitrite reductase	NA|653aa|up_5|NZ_AP022378.1_4594581_4596540_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|105aa|up_4|NZ_AP022378.1_4596731_4597046_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|550aa|up_3|NZ_AP022378.1_4597042_4598692_+	PRK09395, actP, cation/acetate symporter ActP	NA|230aa|up_2|NZ_AP022378.1_4598737_4599427_-	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]	NA|137aa|up_1|NZ_AP022378.1_4599419_4599830_-	COG1380, COG1380, Putative effector of murein hydrolase LrgA [General function prediction only]	NA|297aa|up_0|NZ_AP022378.1_4599931_4600822_+	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold	NA|549aa|down_0|NZ_AP022378.1_4600969_4602616_-	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309	NA|450aa|down_1|NZ_AP022378.1_4602773_4604123_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|153aa|down_2|NZ_AP022378.1_4604731_4605190_-	PRK15002, PRK15002, redox-sensitive transcriptional activator SoxR	NA|108aa|down_3|NZ_AP022378.1_4605276_4605600_+	PRK10219, PRK10219, superoxide response transcriptional regulator SoxS	NA|529aa|down_4|NZ_AP022378.1_4605602_4607189_-	COG4943, COG4943, Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]	NA|94aa|down_5|NZ_AP022378.1_4607741_4608023_+	pfam15940, YjcB, Family of unknown function	NA|175aa|down_6|NZ_AP022378.1_4608089_4608614_-	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|941aa|down_7|NZ_AP022378.1_4608865_4611688_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|119aa|down_8|NZ_AP022378.1_4612070_4612427_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|238aa|down_9|NZ_AP022378.1_4612554_4613268_-	PRK11009, aphA, class B acid phosphatase
