prefix	bacteria_id	bacteria_def	genome_size	prophage_start	prophage_end	method	key_proteins	best_hit_species	CDS_number	attl_region	attr_region
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	413400	536046	DBSCAN-SWA	protease,tRNA,plate,portal,coat,terminase,transposase	Escherichia_phage(20.0%)	103	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	879075	964029	DBSCAN-SWA	lysis,tRNA,portal,coat,terminase,transposase,integrase,capsid,holin	Enterobacteria_phage(34.55%)	90	895618:895633	964969:964984
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	1304781	1311088	DBSCAN-SWA		Enterobacteria_phage(50.0%)	6	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	1338112	1430471	DBSCAN-SWA	transposase,integrase,tail,holin	Stx2-converting_phage(19.44%)	78	1333839:1333851	1380029:1380083
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	1474371	1574994	DBSCAN-SWA	transposase,integrase,tRNA,tail	Enterobacteria_phage(35.0%)	85	1491943:1492002	1557011:1557449
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	1852375	1862892	DBSCAN-SWA	holin	Escherichia_phage(27.27%)	13	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	1973511	2034229	DBSCAN-SWA	protease,tRNA,tail,transposase,integrase	Escherichia_phage(35.0%)	51	2012555:2012614	2034241:2034302
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2037288	2049808	DBSCAN-SWA	transposase	Escherichia_phage(62.5%)	16	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2225919	2257896	DBSCAN-SWA	protease,tRNA,portal,terminase,head,tail,transposase	uncultured_Caudovirales_phage(53.85%)	35	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2334461	2363383	DBSCAN-SWA	transposase	Shigella_phage(60.0%)	22	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2375278	2414206	DBSCAN-SWA	transposase,integrase,holin	Acinetobacter_phage(27.27%)	28	2396345:2396359	2409147:2409161
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2472340	2547424	DBSCAN-SWA	transposase,integrase,protease,tRNA	Acinetobacter_phage(14.29%)	54	2467609:2467627	2555882:2555900
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2559650	2611692	DBSCAN-SWA	transposase,protease,tRNA	Stx2-converting_phage(18.52%)	40	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2689293	2800608	DBSCAN-SWA	tRNA,terminase,head,tail,transposase,capsid,holin	Enterobacteria_phage(40.48%)	94	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2894572	2902041	DBSCAN-SWA	transposase	Escherichia_phage(66.67%)	7	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	2966952	2974193	DBSCAN-SWA	tail,transposase	Enterobacteria_phage(33.33%)	6	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	3109465	3117259	DBSCAN-SWA	transposase	Pseudomonas_phage(50.0%)	6	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	3300024	3358922	DBSCAN-SWA	transposase,integrase,protease,tRNA	Enterobacteria_phage(33.33%)	41	3306690:3306705	3351822:3351837
GCF_010231485.1_ASM1023148v1	NZ_CP034931	Shigella flexneri strain 2013C-3749 chromosome, complete genome	4654019	4181461	4223927	DBSCAN-SWA	transposase,integrase,tRNA	Acinetobacter_phage(14.29%)	36	4189077:4189091	4203133:4203147
GCF_010231485.1_ASM1023148v1	NZ_CP034932	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-1, complete sequence	71053	0	14960	DBSCAN-SWA	transposase	Escherichia_phage(75.0%)	15	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034932	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-1, complete sequence	71053	18307	20220	DBSCAN-SWA	transposase	Streptococcus_phage(66.67%)	4	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034932	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-1, complete sequence	71053	26345	29721	DBSCAN-SWA		Moraxella_phage(33.33%)	5	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034932	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-1, complete sequence	71053	55385	55607	DBSCAN-SWA		Vibrio_virus(100.0%)	1	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034932	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-1, complete sequence	71053	63422	64244	DBSCAN-SWA		Yersinia_phage(100.0%)	1	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034932	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-1, complete sequence	71053	69597	70125	DBSCAN-SWA		Xanthomonas_phage(100.0%)	1	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	223405	20953	84800	DBSCAN-SWA	transposase,protease	Stx2-converting_phage(30.0%)	33	NA	NA
GCF_010231485.1_ASM1023148v1	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	223405	99447	173461	DBSCAN-SWA	tRNA,transposase,protease	Acinetobacter_phage(36.36%)	51	NA	NA
