assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010103655.1_ASM1010365v1	NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	1	420773-420846	1	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,cas14j,csn2,cas2,cas1,cas9	Orphan	GTTTTTCTGTTGCTCACCAACTAT	24	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas14j,csn2,cas2,cas1,cas9	NA,NA|71aa|down_9|NZ_CP045045.1_431853_432066_+	NA|423aa|up_9|NZ_CP045045.1_406533_407802_+	PRK00549, PRK00549, competence damage-inducible protein A; Provisional	NA|349aa|up_8|NZ_CP045045.1_407915_408962_+	PRK09354, recA, recombinase A; Provisional	NA|519aa|up_7|NZ_CP045045.1_409358_410915_+	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|266aa|up_6|NZ_CP045045.1_411074_411872_+	pfam13277, YmdB, YmdB-like protein	NA|124aa|up_5|NZ_CP045045.1_411959_412331_+	COG4550, COG4550, Predicted membrane protein [Function unknown]	NA|859aa|up_4|NZ_CP045045.1_412331_414908_+	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|711aa|up_3|NZ_CP045045.1_414939_417072_+	COG0323, MutL, DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair]	NA|185aa|up_2|NZ_CP045045.1_417096_417651_+	cd00555, Maf, Nucleotide binding protein Maf	NA|146aa|up_1|NZ_CP045045.1_417783_418221_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|324aa|up_0|NZ_CP045045.1_418395_419367_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|217aa|down_0|NZ_CP045045.1_421168_421819_-	TIGR01990, bPGM, beta-phosphoglucomutase	NA|915aa|down_1|NZ_CP045045.1_421833_424578_-	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|238aa|down_2|NZ_CP045045.1_424838_425552_+	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|227aa|down_3|NZ_CP045045.1_425947_426628_+	pfam13731, WxL, WxL domain surface cell wall-binding	NA|236aa|down_4|NZ_CP045045.1_426723_427431_+	pfam13731, WxL, WxL domain surface cell wall-binding	NA|150aa|down_5|NZ_CP045045.1_427471_427921_-	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|423aa|down_6|NZ_CP045045.1_428129_429398_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|435aa|down_7|NZ_CP045045.1_429390_430695_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|289aa|down_8|NZ_CP045045.1_430862_431729_+	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown]	NA|71aa|down_9|NZ_CP045045.1_431853_432066_+	NA
GCF_010103655.1_ASM1010365v1	NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	2	1237617-1237727	2	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,cas14j,csn2,cas2,cas1,cas9	Orphan	CGAAGGGCAAGTTGTGTCATTTGCACGAA	29	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas14j,csn2,cas2,cas1,cas9	NA|97aa|up_3|NZ_CP045045.1_1233346_1233637_+,NA|322aa|up_2|NZ_CP045045.1_1233812_1234778_+,NA|60aa|up_1|NZ_CP045045.1_1234865_1235045_-,NA	NA|452aa|up_9|NZ_CP045045.1_1224725_1226081_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|184aa|up_8|NZ_CP045045.1_1226310_1226862_+	PRK13661, PRK13661, ECF-type riboflavin transporter substrate-binding protein	NA|569aa|up_7|NZ_CP045045.1_1226962_1228669_+	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|278aa|up_6|NZ_CP045045.1_1228665_1229499_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|603aa|up_5|NZ_CP045045.1_1229941_1231750_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|427aa|up_4|NZ_CP045045.1_1232018_1233299_+	pfam02388, FemAB, FemAB family	NA|97aa|up_3|NZ_CP045045.1_1233346_1233637_+	NA	NA|322aa|up_2|NZ_CP045045.1_1233812_1234778_+	NA	NA|60aa|up_1|NZ_CP045045.1_1234865_1235045_-	NA	NA|497aa|up_0|NZ_CP045045.1_1235258_1236749_-	pfam14264, Glucos_trans_II, Glucosyl transferase GtrII	NA|357aa|down_0|NZ_CP045045.1_1238227_1239298_+	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|227aa|down_1|NZ_CP045045.1_1239316_1239997_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|278aa|down_2|NZ_CP045045.1_1240016_1240850_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|398aa|down_3|NZ_CP045045.1_1240864_1242058_+	cd08019, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|513aa|down_4|NZ_CP045045.1_1242427_1243966_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|309aa|down_5|NZ_CP045045.1_1244020_1244947_-	cd01137, PsaA, Metal binding protein PsaA	NA|290aa|down_6|NZ_CP045045.1_1244933_1245803_-	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|250aa|down_7|NZ_CP045045.1_1245799_1246549_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|325aa|down_8|NZ_CP045045.1_1246761_1247736_+	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional	NA|382aa|down_9|NZ_CP045045.1_1247892_1249038_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
GCF_010103655.1_ASM1010365v1	NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	3	1257233-1257928	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no		WYL,csa3,cas3,DEDDh,DinG,cas14j,csn2,cas2,cas1,cas9	Orphan	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC,GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC,GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	9,10,9	10	Orphan	WYL,csa3,cas3,DEDDh,DinG,cas14j,csn2,cas2,cas1,cas9	NA,NA	NA|325aa|up_9|NZ_CP045045.1_1246761_1247736_+	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional	NA|382aa|up_8|NZ_CP045045.1_1247892_1249038_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|115aa|up_7|NZ_CP045045.1_1249105_1249450_+	pfam08866, DUF1831, Putative amino acid metabolism	NA|375aa|up_6|NZ_CP045045.1_1249675_1250800_+	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|413aa|up_5|NZ_CP045045.1_1250979_1252218_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|172aa|up_4|NZ_CP045045.1_1252234_1252750_-	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|190aa|up_3|NZ_CP045045.1_1252882_1253452_+	pfam13305, WHG, WHG domain	NA|122aa|up_2|NZ_CP045045.1_1253549_1253915_+	pfam06279, DUF1033, Protein of unknown function (DUF1033)	NA|694aa|up_1|NZ_CP045045.1_1254045_1256127_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|288aa|up_0|NZ_CP045045.1_1256211_1257075_+	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|473aa|down_0|NZ_CP045045.1_1258334_1259753_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|338aa|down_1|NZ_CP045045.1_1259749_1260763_+	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|578aa|down_2|NZ_CP045045.1_1260767_1262501_+	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit	NA|589aa|down_3|NZ_CP045045.1_1262497_1264264_+	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|327aa|down_4|NZ_CP045045.1_1264343_1265324_-	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|302aa|down_5|NZ_CP045045.1_1265445_1266351_+	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|404aa|down_6|NZ_CP045045.1_1266379_1267591_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|808aa|down_7|NZ_CP045045.1_1267904_1270328_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|234aa|down_8|NZ_CP045045.1_1270458_1271160_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|250aa|down_9|NZ_CP045045.1_1271277_1272027_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
GCF_010103655.1_ASM1010365v1	NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	4	2532382-2533014	4,2,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	csn2,cas2,cas1,cas9	WYL,csa3,cas3,DEDDh,DinG,cas14j,csn2,cas2,cas1,cas9	Type II-B,Type II-A,Type II-C	GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC,GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC,AGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAA,TGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	36,36,35,37	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B:II-A,II-B	9,9,6,6	9	TypeII-B,TypeII-A,TypeII-C	WYL,csa3,cas3,DEDDh,DinG,cas14j,csn2,cas2,cas1,cas9	NA,NA|78aa|down_4|NZ_CP045045.1_2539445_2539679_-	NA|412aa|up_9|NZ_CP045045.1_2519817_2521053_-	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain	NA|114aa|up_8|NZ_CP045045.1_2521208_2521550_-	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|729aa|up_7|NZ_CP045045.1_2521612_2523799_-	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|284aa|up_6|NZ_CP045045.1_2524152_2525004_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|185aa|up_5|NZ_CP045045.1_2525127_2525682_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|507aa|up_4|NZ_CP045045.1_2525692_2527213_-	PLN02371, PLN02371, phosphoglucosamine mutase family protein	NA|152aa|up_3|NZ_CP045045.1_2527246_2527702_-	COG1438, ArgR, Arginine repressor [Transcription]	NA|506aa|up_2|NZ_CP045045.1_2527843_2529361_-	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|318aa|up_1|NZ_CP045045.1_2529361_2530315_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|338aa|up_0|NZ_CP045045.1_2530550_2531564_+	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	csn2|220aa|down_0|NZ_CP045045.1_2533106_2533766_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|110aa|down_1|NZ_CP045045.1_2533766_2534096_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_2|NZ_CP045045.1_2534092_2534959_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1338aa|down_3|NZ_CP045045.1_2534959_2538973_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|78aa|down_4|NZ_CP045045.1_2539445_2539679_-	NA	NA|472aa|down_5|NZ_CP045045.1_2539822_2541238_-	TIGR01886, Beta-Ala-Xaa_dipeptidase, dipeptidase PepV	NA|258aa|down_6|NZ_CP045045.1_2541371_2542145_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|550aa|down_7|NZ_CP045045.1_2542214_2543864_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|517aa|down_8|NZ_CP045045.1_2544043_2545594_+	PRK14022, PRK14022, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase	NA|191aa|down_9|NZ_CP045045.1_2545660_2546233_-	COG0400, COG0400, Predicted esterase [General function prediction only]
