The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	2933718	291744	386546	2933718	tail,tRNA,holin,terminase,portal,head,transposase,capsid,protease	Erysipelothrix_phage(52.27%)	100	NA	NA
WP_002396786.1|291744_291888_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_002378864.1|292219_293836_-	phosphatase PAP2/LCP family protein	NA	NA	NA	NA	NA
WP_002378863.1|294520_295159_+	chitin-binding protein	NA	NA	NA	NA	NA
WP_002378862.1|295325_296318_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_002354768.1|296456_296672_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_002354773.1|296845_297076_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002354774.1|297075_297417_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SAB3	Streptococcus_phage	42.5	5.5e-17
WP_002389470.1|297787_301402_+	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.5	2.0e-48
WP_002354777.1|301568_305222_+	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.8	1.4e-65
WP_002378860.1|305270_305963_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_002378859.1|306071_307592_+	gluconokinase	NA	NA	NA	NA	NA
WP_002378858.1|307675_308395_+	DUF5105 domain-containing protein	NA	NA	NA	NA	NA
WP_002354782.1|308522_308990_+	DNA starvation/stationary phase protection protein	NA	C1KFH1	Lactobacillus_virus	25.9	1.0e-05
WP_002365424.1|309211_309655_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_002354786.1|309668_310061_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_021733037.1|310267_310609_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	41.3	8.2e-13
WP_002378856.1|311319_311550_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162125998.1|311866_312052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010785103.1|312417_312876_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_104874170.1|312872_315260_+	DUF2034 domain-containing protein	NA	NA	NA	NA	NA
WP_104874171.1|315278_318191_-	DNA modification methyltransferase	NA	A0A1P8BMM5	Lactococcus_phage	24.8	5.0e-18
WP_002362734.1|318440_318665_-	helix-turn-helix transcriptional regulator	NA	A0A2K5B263	Erysipelothrix_phage	68.8	1.9e-18
WP_010785101.1|318665_320312_-	DUF2326 domain-containing protein	NA	NA	NA	NA	NA
WP_002362738.1|320301_320526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075582932.1|320509_321604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002362741.1|322152_322737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362742.1|322838_323036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362743.1|323040_323355_+	hypothetical protein	NA	A0A2K5B2A7	Erysipelothrix_phage	45.3	7.6e-13
WP_104874173.1|323354_324497_+	DUF2800 domain-containing protein	NA	Q6DMW2	Streptococcus_phage	58.0	2.3e-123
WP_002362745.1|324498_325047_+	DUF2815 family protein	NA	A0A2K5B2A9	Erysipelothrix_phage	83.1	1.4e-83
WP_104874174.1|325106_327044_+	hypothetical protein	NA	A0A2K5B2B0	Erysipelothrix_phage	66.8	2.4e-258
WP_010785095.1|327228_327897_+	Rha family transcriptional regulator	NA	A0A2K5B268	Erysipelothrix_phage	64.5	1.2e-76
WP_002362748.1|327901_328114_+	hypothetical protein	NA	A0A2K5B269	Erysipelothrix_phage	56.2	4.9e-16
WP_010713967.1|328106_328451_+	hypothetical protein	NA	A0A2K5B270	Erysipelothrix_phage	53.3	4.8e-29
WP_162125999.1|328443_330690_+	DNA primase	NA	A0A1B0RXC5	Streptococcus_phage	48.6	2.3e-204
WP_002362753.1|330815_331028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362755.1|331017_331227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362757.1|331223_331511_+	VRR-NUC domain-containing protein	NA	A0A1B0RXC4	Streptococcus_phage	65.6	7.1e-26
WP_104874175.1|331507_332863_+	DEAD/DEAH box helicase	NA	A0A2K5B273	Erysipelothrix_phage	71.7	3.1e-164
WP_002362761.1|332825_333200_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362763.1|333211_333628_+	DUF1492 domain-containing protein	NA	A0A2K5B275	Erysipelothrix_phage	37.2	2.8e-15
WP_029645172.1|333788_334148_+	HNH endonuclease	NA	A0A2K5B276	Erysipelothrix_phage	56.6	1.1e-31
WP_025191566.1|334279_334858_+|terminase	terminase	terminase	A0A2K5B277	Erysipelothrix_phage	51.8	2.4e-52
WP_104874186.1|334862_335645_+	S-adenosylmethionine synthetase	NA	NA	NA	NA	NA
WP_162126000.1|335645_336896_+	site-specific DNA-methyltransferase	NA	A0A2I4R670	Erysipelothrix_phage	60.1	3.4e-141
WP_010785090.1|336983_337373_+	DUF4314 domain-containing protein	NA	E4ZFL7	Streptococcus_phage	71.0	3.1e-16
WP_002362779.1|337375_337570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104874176.1|337544_337742_+	DUF5049 domain-containing protein	NA	NA	NA	NA	NA
WP_010713960.1|337731_337956_+	hypothetical protein	NA	A0A2K5B284	Erysipelothrix_phage	45.9	1.1e-13
WP_010785089.1|338009_339608_+|terminase	terminase large subunit	terminase	A0A2K5B285	Erysipelothrix_phage	84.3	3.6e-268
WP_002362788.1|339757_340177_+	YjdF family protein	NA	NA	NA	NA	NA
WP_010785088.1|340227_341595_+|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	75.1	2.3e-178
WP_104874187.1|341506_342238_+|protease	Clp protease ClpP	protease	M1PLE5	Streptococcus_phage	57.0	3.2e-62
WP_002362795.1|342241_343459_+|capsid	phage major capsid protein	capsid	A0A2I4R671	Erysipelothrix_phage	48.3	4.7e-103
WP_002362796.1|343529_343724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362797.1|343736_344069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362798.1|344114_344426_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2K5B290	Erysipelothrix_phage	74.3	4.4e-37
WP_002362799.1|344422_344761_+|head,tail	head-tail adaptor protein	head,tail	A0A2K5B291	Erysipelothrix_phage	55.7	1.3e-23
WP_010785086.1|344753_345185_+	hypothetical protein	NA	A0A2K5B292	Erysipelothrix_phage	58.7	1.3e-39
WP_104874188.1|345211_345520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003731136.1|345521_346112_+|tail	phage tail protein	tail	A0A2K5B294	Erysipelothrix_phage	72.2	4.1e-76
WP_003731137.1|346121_346505_+	hypothetical protein	NA	A0A2K5B295	Erysipelothrix_phage	64.2	5.4e-37
WP_104874177.1|346770_347415_+	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_104874178.1|347482_350044_+|tail	phage tail protein	tail	A0A2K5B297	Erysipelothrix_phage	74.5	1.1e-82
WP_104874179.1|350117_350639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104874180.1|350707_351400_+|tail	phage tail protein	tail	A0A1L2BYA2	Clostridium_phage	29.0	1.1e-19
WP_104874181.1|351396_355461_+	hypothetical protein	NA	A0A1B1P770	Bacillus_phage	41.7	3.5e-86
WP_104874182.1|355634_356054_+	DUF1617 family protein	NA	A0A1I9KKA6	Lactobacillus_phage	25.6	1.1e-06
WP_075582931.1|356103_356517_+|holin	phage holin family protein	holin	A0A2K5B2A2	Erysipelothrix_phage	57.0	1.5e-37
WP_002362814.1|356506_357427_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1D8ETE4	Propionibacterium_phage	41.7	3.4e-29
WP_002362816.1|357547_357952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154081023.1|357944_358109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362819.1|358224_359940_+	recombinase family protein	NA	Q6DMS6	Streptococcus_phage	40.4	9.4e-73
WP_002378843.1|359899_361474_+	recombinase family protein	NA	Q6DMS5	Streptococcus_phage	54.7	3.2e-152
WP_075582913.1|361598_363641_+	DUF4357 domain-containing protein	NA	NA	NA	NA	NA
WP_002362824.1|363661_363946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378853.1|365086_365893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378852.1|365898_366639_+	adenine-specific DNA-methyltransferase	NA	A0A0F7LBF0	uncultured_marine_virus	26.5	5.6e-14
WP_002378851.1|367038_367599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002354793.1|367745_370265_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_002360964.1|370412_371240_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002365419.1|371236_372052_-	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_002354800.1|372068_372560_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002354802.1|372572_372992_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002354809.1|373249_374185_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.4	2.4e-22
WP_002378842.1|374177_374948_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002413934.1|375135_376110_+|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_002387410.1|376309_377845_-	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA	NA
WP_002383181.1|377865_377988_-	putative metal homeostasis protein	NA	NA	NA	NA	NA
WP_002367488.1|378022_378997_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_002354818.1|379012_379162_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002354822.1|379272_379542_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_002401676.1|379742_380141_+	OsmC family protein	NA	NA	NA	NA	NA
WP_002378838.1|380503_381226_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	27.0	8.1e-18
WP_002368484.1|381222_381894_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002354826.1|381906_382725_+	membrane protein	NA	NA	NA	NA	NA
WP_002354827.1|382816_384586_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	28.5	4.2e-60
WP_002354828.1|384566_385295_+	response regulator	NA	NA	NA	NA	NA
WP_002354829.1|385446_385866_+|holin	antiholin-like murein hydrolase modulator LrgA	holin	NA	NA	NA	NA
WP_002365411.1|385862_386546_+|holin	antiholin-like protein LrgB	holin	NA	NA	NA	NA
>prophage 2
NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	2933718	734258	743999	2933718		Streptococcus_phage(57.14%)	11	NA	NA
WP_002356366.1|734258_734897_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.8	2.1e-54
WP_002356367.1|734916_735246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002384059.1|735247_736198_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.0	6.2e-34
WP_002356371.1|736314_737154_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002356372.1|737146_737494_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	36.7	8.1e-16
WP_002359438.1|737606_738479_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	57.2	1.1e-80
WP_002378641.1|738493_739156_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.1	8.8e-19
WP_002356377.1|739139_739898_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_002362328.1|740023_741142_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002356379.1|741186_741783_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.4	6.0e-51
WP_002382497.1|741815_743999_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.8	4.0e-286
>prophage 3
NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	2933718	1249675	1313620	2933718	integrase,tRNA,holin,portal,terminase,tail	Enterococcus_phage(35.48%)	68	1270117:1270132	1299612:1299627
WP_002362075.1|1249675_1250800_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_002356962.1|1250979_1252218_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_002356963.1|1252234_1252750_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_002356965.1|1252882_1253452_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002356966.1|1253549_1253915_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_002378482.1|1254045_1256127_+	DNA topoisomerase III	NA	NA	NA	NA	NA
WP_002378481.1|1256211_1257075_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_002356974.1|1258334_1259753_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_002356976.1|1259749_1260763_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_002378477.1|1260767_1262501_+	thiol reductant ABC exporter subunit CydD	NA	A0A2H4UU96	Bodo_saltans_virus	24.3	6.5e-13
WP_002364246.1|1262497_1264264_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	25.8	1.6e-22
WP_002378476.1|1264343_1265324_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_002360016.1|1265445_1266351_+	prenyltransferase	NA	NA	NA	NA	NA
WP_002378475.1|1266379_1267591_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002378474.1|1267904_1270328_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.0	2.2e-83
1270117:1270132	attL	TTGAAGAAGCGAAAAA	NA	NA	NA	NA
WP_002364244.1|1270458_1271160_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002381711.1|1271277_1272027_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.5	1.9e-33
WP_002401809.1|1272016_1273846_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_162126010.1|1273971_1275045_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_002360022.1|1275334_1276663_+	amino acid permease	NA	NA	NA	NA	NA
WP_002364362.1|1276903_1277872_+	Flp pilus assembly complex ATPase component	NA	NA	NA	NA	NA
WP_002369171.1|1277828_1278875_+	secretion system protein F	NA	NA	NA	NA	NA
WP_002356991.1|1278874_1279150_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_002378470.1|1279146_1279677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378469.1|1279617_1280766_-|integrase	site-specific integrase	integrase	A0A0M5M609	Bacillus_phage	28.8	8.6e-38
WP_002378468.1|1280865_1281594_-	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	48.4	3.2e-22
WP_002378467.1|1281629_1281974_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A097QQ08	Enterococcus_phage	71.7	3.2e-41
WP_002364355.1|1281990_1282323_-	helix-turn-helix transcriptional regulator	NA	A0A097QQ00	Enterococcus_phage	69.1	2.6e-35
WP_002364354.1|1282634_1282811_+	helix-turn-helix transcriptional regulator	NA	D2IZW2	Enterococcus_phage	65.5	1.7e-14
WP_002381719.1|1282821_1283133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378466.1|1283171_1283897_+	phage regulatory protein	NA	A0A0P0IDD0	Lactobacillus_phage	54.7	2.2e-31
WP_002357001.1|1283922_1284111_-	YegP family protein	NA	NA	NA	NA	NA
WP_002378465.1|1284165_1284375_+	hypothetical protein	NA	D2IZ57	Enterococcus_phage	74.2	8.8e-18
WP_002357006.1|1285032_1285587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357007.1|1285806_1286124_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378463.1|1286116_1286851_+	ERF family protein	NA	A0A1W6JNQ5	Staphylococcus_phage	29.9	3.0e-20
WP_002364344.1|1286855_1287497_+	hypothetical protein	NA	U5U4M2	Lactobacillus_phage	36.0	4.8e-30
WP_002357010.1|1287501_1287702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002364343.1|1287701_1288559_+	helix-turn-helix domain-containing protein	NA	A0A0P0ICZ8	Lactobacillus_phage	36.1	1.1e-24
WP_002378462.1|1288555_1288963_+	RusA family crossover junction endodeoxyribonuclease	NA	D2IYU2	Enterococcus_phage	84.3	5.9e-58
WP_002357018.1|1289870_1290287_+	autolysin	NA	D2IZ17	Enterococcus_phage	99.3	1.4e-67
WP_002378460.1|1291001_1291910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378459.1|1291939_1292389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002364295.1|1293121_1293556_+|terminase	terminase small subunit	terminase	A7J290	Streptococcus_phage	64.5	1.8e-44
WP_002369892.1|1293536_1294820_+|terminase	PBSX family phage terminase large subunit	terminase	Q9AZ91	Lactobacillus_prophage	65.5	6.0e-157
WP_002378458.1|1294819_1296304_+|portal	phage portal protein	portal	A0A097QPZ5	Enterococcus_phage	99.6	3.8e-139
WP_002378457.1|1296296_1297223_+	hypothetical protein	NA	A0A097QPZ9	Enterococcus_phage	100.0	4.4e-133
WP_002378456.1|1297327_1297981_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378455.1|1297994_1298891_+	hypothetical protein	NA	U3PDP8	Lactobacillus_phage	49.8	1.9e-69
WP_002363369.1|1298961_1299294_+	hypothetical protein	NA	A0A1W6JNH7	Staphylococcus_phage	38.5	2.7e-08
WP_002378454.1|1299290_1299566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002363372.1|1299562_1299901_+	hypothetical protein	NA	A0A1L2K255	Streptococcus_phage	38.7	1.8e-12
1299612:1299627	attR	TTGAAGAAGCGAAAAA	NA	NA	NA	NA
WP_002363373.1|1299897_1300290_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_002364302.1|1300308_1300914_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_002378453.1|1300916_1301099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002401805.1|1301147_1301720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378449.1|1301773_1302172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002366371.1|1302240_1302546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002378448.1|1302532_1306987_+|tail	phage tail tape measure protein	tail	M1PKM6	Streptococcus_phage	48.1	3.0e-86
WP_002363380.1|1306983_1307706_+	hypothetical protein	NA	C5IUK4	Streptococcus_phage	39.2	1.2e-42
WP_002378447.1|1307705_1309151_+	peptidase M23	NA	A0A1X9IGI5	Lactococcus_phage	39.2	9.0e-77
WP_002363383.1|1309156_1309897_+	hypothetical protein	NA	A0A1X9IGH6	Lactococcus_phage	34.6	1.2e-27
WP_002363384.1|1309913_1310366_+	hypothetical protein	NA	C0LZY6	Enterococcus_phage	40.3	3.3e-17
WP_002363385.1|1310384_1310780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002368228.1|1310781_1310904_+	XkdX family protein	NA	NA	NA	NA	NA
WP_002378446.1|1310914_1311295_+|holin	holin	holin	A0A097QQ04	Enterococcus_phage	100.0	1.1e-61
WP_002378445.1|1311307_1312567_+	LysM peptidoglycan-binding domain-containing protein	NA	C9E2L1	Enterococcus_phage	89.2	3.3e-208
WP_002357053.1|1313419_1313620_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	80.3	1.6e-24
>prophage 4
NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	2933718	1562416	1577600	2933718	transposase	Streptococcus_phage(85.71%)	19	NA	NA
WP_010710189.1|1562416_1563097_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	4.9e-126
WP_010711054.1|1563300_1564149_-	streptomycin adenylyltransferase Str	NA	E4ZFP8	Streptococcus_phage	49.1	5.3e-77
WP_002401792.1|1564156_1564951_-	plasmid recombination enzyme	NA	NA	NA	NA	NA
WP_002352254.1|1565203_1565851_-	type A-8 chloramphenicol O-acetyltransferase	NA	A0A1X9I6V6	Streptococcus_phage	56.3	2.1e-70
WP_010710189.1|1566054_1566735_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	4.9e-126
WP_002378356.1|1566818_1567367_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_002346508.1|1567619_1569296_+	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	98.6	9.9e-269
WP_014638415.1|1569415_1569586_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	94.9	2.4e-13
WP_001809736.1|1569606_1569702_+	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_002292226.1|1569826_1570564_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
WP_073459356.1|1570709_1570994_+	topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	93.0	2.3e-40
WP_021732891.1|1571138_1571993_+	ParA family protein	NA	A0A1X9I765	Streptococcus_phage	100.0	1.1e-154
WP_002295735.1|1572091_1572307_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	98.6	1.4e-31
WP_000301765.1|1572323_1572596_+	antitoxin	NA	A0A1X9I6E5	Streptococcus_phage	100.0	5.0e-05
WP_002401483.1|1572597_1573461_+	toxin zeta	NA	NA	NA	NA	NA
WP_002333463.1|1573901_1574219_+	hypothetical protein	NA	A0A1W6JN36	Lactococcus_phage	79.4	3.5e-26
WP_010710189.1|1574536_1575217_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	4.9e-126
WP_002357480.1|1575979_1576831_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_002357481.1|1576832_1577600_+	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	39.8	1.3e-26
>prophage 5
NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	2933718	1881811	1899582	2933718	holin,tail	Enterococcus_phage(46.15%)	19	NA	NA
WP_002401525.1|1881811_1882936_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	44.3	1.2e-76
WP_002357842.1|1883054_1883450_-|holin	phage holin family protein	holin	F0PIJ6	Enterococcus_phage	48.9	2.8e-33
WP_002378249.1|1883473_1885243_-	hypothetical protein	NA	A0A097BYA8	Enterococcus_phage	62.2	1.2e-142
WP_002378248.1|1885275_1886733_-	hypothetical protein	NA	C9E2K6	Enterococcus_phage	47.5	9.5e-175
WP_002378247.1|1886745_1887672_-|tail	phage tail family protein	tail	C9E2K5	Enterococcus_phage	78.6	4.1e-147
WP_002401527.1|1887673_1890607_-	hypothetical protein	NA	A0A1U9WR55	Streptococcus_virus	25.1	2.8e-08
WP_002392533.1|1890596_1890890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002377707.1|1890982_1891342_-	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	32.2	7.6e-09
WP_162126015.1|1891374_1891887_-|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	49.4	5.2e-35
WP_002401528.1|1891899_1892316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002360491.1|1892537_1892945_-	RinA family phage transcriptional activator	NA	NA	NA	NA	NA
WP_002363798.1|1892964_1893357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002378242.1|1893423_1894266_-	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	30.3	1.4e-29
WP_002401529.1|1894284_1894959_-	DnaD domain protein	NA	A0A1X9I617	Streptococcus_phage	32.7	9.5e-21
WP_002361687.1|1895435_1895918_+	helix-turn-helix transcriptional regulator	NA	R9QTP6	Staphylococcus_phage	48.6	1.5e-20
WP_002382232.1|1895952_1896438_+	toxin	NA	A0A097BY56	Enterococcus_phage	70.5	4.4e-60
WP_002401530.1|1896497_1896728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002360497.1|1896810_1897161_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_002357859.1|1897185_1899582_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.1	1.7e-19
>prophage 6
NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	2933718	2213977	2231504	2933718	integrase	Streptococcus_phage(100.0%)	20	2213188:2213202	2225521:2225535
2213188:2213202	attL	ATAAAAATCTTTCAC	NA	NA	NA	NA
WP_001291561.1|2213977_2215195_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|2215276_2215480_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|2215940_2216171_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|2216167_2216590_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|2217094_2217448_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_002319681.1|2217507_2217675_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	66.0	7.3e-15
WP_002364936.1|2217797_2219717_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	94.5	0.0e+00
WP_073459231.1|2219732_2219849_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224318.1|2220093_2221026_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_000769868.1|2221022_2222024_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804748.1|2222020_2224198_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000331160.1|2224200_2226648_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
2225521:2225535	attR	ATAAAAATCTTTCAC	NA	NA	NA	NA
WP_000506270.1|2226631_2227138_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|2227112_2227610_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|2227726_2227948_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|2227990_2229196_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|2229218_2229371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|2229373_2230759_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|2230787_2231174_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|2231189_2231504_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
>prophage 7
NZ_CP045045	Enterococcus faecalis strain JY32 chromosome, complete genome	2933718	2281964	2289879	2933718		uncultured_Caudovirales_phage(16.67%)	11	NA	NA
WP_002378096.1|2281964_2283140_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	48.0	5.1e-86
WP_002378095.1|2283155_2283671_-	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	49.1	7.7e-39
WP_002368164.1|2283688_2284183_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002361363.1|2284250_2284610_-	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_002393469.1|2284677_2285058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002355799.1|2285104_2285464_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002355798.1|2285524_2285725_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002355797.1|2285838_2286360_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	3.0e-14
WP_002355796.1|2286759_2287830_-	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	49.0	7.6e-89
WP_002361357.1|2287870_2288827_-	ATP-binding cassette domain-containing protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	23.9	4.2e-06
WP_002364714.1|2288826_2289879_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	2.0e-17
