assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010092625.1_ASM1009262v1	NZ_CP048039	Alcaligenes faecalis strain MUB14 chromosome, complete genome	1	925658-925761	1	CRISPRCasFinder	no		WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,csa3,DEDDh,cas3,PD-DExK	Orphan	AGCCGAAGGCGCAGCGTGGGGGCTTTTTT	29	1	1	925687-925732	NZ_CP048039.1_3569917-3569872	NA	1	1	Orphan	WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,csa3,DEDDh,cas3,PD-DExK	NA,NA	NA|281aa|up_9|NZ_CP048039.1_915418_916261_-	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	NA|481aa|up_8|NZ_CP048039.1_916336_917779_+	cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like	NA|253aa|up_7|NZ_CP048039.1_917915_918674_+	PRK07231, FabG-like, SDR family oxidoreductase	NA|210aa|up_6|NZ_CP048039.1_918754_919384_+	PRK09417, mogA, molybdenum cofactor biosynthesis protein MogA; Provisional	NA|355aa|up_5|NZ_CP048039.1_919465_920530_+	PRK09196, PRK09196, fructose-bisphosphate aldolase class II	NA|294aa|up_4|NZ_CP048039.1_920669_921551_+	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|171aa|up_3|NZ_CP048039.1_921793_922306_+	pfam00731, AIRC, AIR carboxylase	NA|394aa|up_2|NZ_CP048039.1_922321_923503_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|342aa|up_1|NZ_CP048039.1_923495_924521_+	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|272aa|up_0|NZ_CP048039.1_924587_925403_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|149aa|down_0|NZ_CP048039.1_925775_926222_+	cd03454, YdeM, YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function	NA|398aa|down_1|NZ_CP048039.1_926456_927650_-	cd01151, GCD, Glutaryl-CoA dehydrogenase	NA|294aa|down_2|NZ_CP048039.1_927922_928804_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|582aa|down_3|NZ_CP048039.1_928800_930546_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|283aa|down_4|NZ_CP048039.1_930873_931722_-	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|372aa|down_5|NZ_CP048039.1_931753_932869_-	COG0579, COG0579, Predicted dehydrogenase [General function prediction only]	NA|171aa|down_6|NZ_CP048039.1_932957_933470_-	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|211aa|down_7|NZ_CP048039.1_933509_934142_-	TIGR00558, Pyridoxine/pyridoxamine_5'-phosphate_oxidase, pyridoxamine-phosphate oxidase	NA|224aa|down_8|NZ_CP048039.1_934151_934823_-	COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]	NA|267aa|down_9|NZ_CP048039.1_935075_935876_+	cd00755, YgdL_like, Family of activating enzymes (E1) of ubiquitin-like proteins related to the E
GCF_010092625.1_ASM1009262v1	NZ_CP048039	Alcaligenes faecalis strain MUB14 chromosome, complete genome	2	1152380-1153490	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,csa3,DEDDh,cas3,PD-DExK	Type I-F	GTTTGCTGCCGTGTAGGCAGCTTAGAAA,GTTTGCTGCCGTGTAGGCAGCTTAGAAA,GTTTGCTGCCGTGTAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	18,18,18	18	TypeI-F	WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,csa3,DEDDh,cas3,PD-DExK	NA,NA	NA|209aa|up_9|NZ_CP048039.1_1143008_1143635_+	PRK11630, PRK11630, threonylcarbamoyl-AMP synthase	NA|217aa|up_8|NZ_CP048039.1_1143796_1144447_+	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|302aa|up_7|NZ_CP048039.1_1144526_1145432_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|378aa|up_6|NZ_CP048039.1_1145428_1146562_+	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane]	NA|107aa|up_5|NZ_CP048039.1_1146919_1147240_+	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1	NA|125aa|up_4|NZ_CP048039.1_1147250_1147625_+	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|231aa|up_3|NZ_CP048039.1_1147641_1148334_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|447aa|up_2|NZ_CP048039.1_1148330_1149671_-	PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional	NA|389aa|up_1|NZ_CP048039.1_1149677_1150844_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|399aa|up_0|NZ_CP048039.1_1150840_1152037_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|415aa|down_0|NZ_CP048039.1_1153739_1154984_-	pfam03594, BenE, Benzoate membrane transport protein	NA|61aa|down_1|NZ_CP048039.1_1155258_1155441_+	pfam02009, RIFIN, Rifin	NA|397aa|down_2|NZ_CP048039.1_1155467_1156658_-	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|879aa|down_3|NZ_CP048039.1_1156895_1159532_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|371aa|down_4|NZ_CP048039.1_1159749_1160862_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|732aa|down_5|NZ_CP048039.1_1160874_1163070_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	cas1|327aa|down_6|NZ_CP048039.1_1163340_1164321_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1138aa|down_7|NZ_CP048039.1_1164331_1167745_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|430aa|down_8|NZ_CP048039.1_1167900_1169190_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|341aa|down_9|NZ_CP048039.1_1169186_1170209_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)
GCF_010092625.1_ASM1009262v1	NZ_CP048039	Alcaligenes faecalis strain MUB14 chromosome, complete genome	3	1172081-1173848	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,csa3,DEDDh,cas3,PD-DExK	Type I-F	GTTTGCTGCCGTATAGGCAGCTTAGAAA,GTTTGCTGCCGTATAGGCAGCTTAGAAA,GTTTGCTGCCGTATAGGCAGCTTAGAAA	28,28,28	3	3	1172169-1172200|1172349-1172380|1173009-1173040	NZ_CP048039.1_1871550-1871581|NZ_CP048039.1_4189888-4189919|NZ_CP048039.1_1871016-1870985	I-F:I-F:I-F	29,29,27	29	TypeI-F	WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,csa3,DEDDh,cas3,PD-DExK	NA,NA	NA|397aa|up_9|NZ_CP048039.1_1155467_1156658_-	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|879aa|up_8|NZ_CP048039.1_1156895_1159532_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|371aa|up_7|NZ_CP048039.1_1159749_1160862_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|732aa|up_6|NZ_CP048039.1_1160874_1163070_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	cas1|327aa|up_5|NZ_CP048039.1_1163340_1164321_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1138aa|up_4|NZ_CP048039.1_1164331_1167745_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|430aa|up_3|NZ_CP048039.1_1167900_1169190_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|341aa|up_2|NZ_CP048039.1_1169186_1170209_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|340aa|up_1|NZ_CP048039.1_1170361_1171381_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|189aa|up_0|NZ_CP048039.1_1171385_1171952_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|393aa|down_0|NZ_CP048039.1_1174172_1175351_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|653aa|down_1|NZ_CP048039.1_1175344_1177303_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|467aa|down_2|NZ_CP048039.1_1177335_1178736_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|255aa|down_3|NZ_CP048039.1_1178688_1179453_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|615aa|down_4|NZ_CP048039.1_1179585_1181430_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|536aa|down_5|NZ_CP048039.1_1181816_1183424_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|343aa|down_6|NZ_CP048039.1_1183420_1184449_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|309aa|down_7|NZ_CP048039.1_1184524_1185451_-	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|333aa|down_8|NZ_CP048039.1_1185447_1186446_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|203aa|down_9|NZ_CP048039.1_1186534_1187143_+	pfam13649, Methyltransf_25, Methyltransferase domain
GCF_010092625.1_ASM1009262v1	NZ_CP048039	Alcaligenes faecalis strain MUB14 chromosome, complete genome	4	2938210-2938310	4	CRISPRCasFinder	no		WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,csa3,DEDDh,cas3,PD-DExK	Orphan	CCTTGGGGCGGCCCGACGGTAAAA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,csa3,DEDDh,cas3,PD-DExK	NA,NA	NA|430aa|up_9|NZ_CP048039.1_2931083_2932373_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|302aa|up_8|NZ_CP048039.1_2932394_2933300_+	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase	NA|206aa|up_7|NZ_CP048039.1_2933290_2933908_+	cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase	NA|135aa|up_6|NZ_CP048039.1_2933916_2934321_+	TIGR00090, rsfS_iojap_ybeB, ribosome silencing factor RsfS/YbeB/iojap	NA|157aa|up_5|NZ_CP048039.1_2934394_2934865_+	PRK00103, PRK00103, rRNA large subunit methyltransferase; Provisional	NA|206aa|up_4|NZ_CP048039.1_2934890_2935508_+	PRK00032, PRK00032, septum formation inhibitor Maf	NA|258aa|up_3|NZ_CP048039.1_2935648_2936422_+	PRK11657, dsbG, disulfide isomerase/thiol-disulfide oxidase; Provisional	NA|101aa|up_2|NZ_CP048039.1_2936443_2936746_+	COG1416, COG1416, Uncharacterized conserved protein [Function unknown]	NA|257aa|up_1|NZ_CP048039.1_2936879_2937650_+	pfam06629, MipA, MltA-interacting protein MipA	NA|126aa|up_0|NZ_CP048039.1_2937656_2938034_-	PRK06824, PRK06824, translation initiation factor Sui1; Validated	NA|485aa|down_0|NZ_CP048039.1_2938361_2939816_-	pfam06097, DUF945, Bacterial protein of unknown function (DUF945)	NA|292aa|down_1|NZ_CP048039.1_2939894_2940770_-	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|216aa|down_2|NZ_CP048039.1_2940887_2941535_-	TIGR01262, Maleylacetoacetate_isomerase, maleylacetoacetate isomerase	NA|324aa|down_3|NZ_CP048039.1_2941569_2942541_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|149aa|down_4|NZ_CP048039.1_2942540_2942987_-	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|224aa|down_5|NZ_CP048039.1_2943066_2943738_+	PRK00024, PRK00024, DNA repair protein RadC	NA|281aa|down_6|NZ_CP048039.1_2943831_2944674_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|473aa|down_7|NZ_CP048039.1_2944974_2946393_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|226aa|down_8|NZ_CP048039.1_2946431_2947109_+	COG4126, COG4126, Hydantoin racemase [Amino acid transport and metabolism]	NA|442aa|down_9|NZ_CP048039.1_2947137_2948463_+	TIGR02332, putative_4-hydroxyphenylacetate_permease, 4-hydroxyphenylacetate permease
