The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP048051	Pseudomonas chlororaphis subsp. aurantiaca strain zm-1 chromosome, complete genome	6861331	1286879	1393544	6861331	tail,protease,holin,tRNA,plate,lysis	Pseudomonas_phage(40.0%)	106	NA	NA
WP_162094488.1|1286879_1287689_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	32.2	2.5e-07
WP_081362565.1|1287829_1288240_-	SufE family protein	NA	NA	NA	NA	NA
WP_162094489.1|1288236_1289442_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	37.4	1.2e-71
WP_009047206.1|1289518_1290553_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_009047207.1|1290587_1290950_-	ArsC family reductase	NA	NA	NA	NA	NA
WP_081362563.1|1291176_1292823_+	Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_124298603.1|1292935_1294135_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA	NA
WP_038581786.1|1294174_1296877_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_009047211.1|1296924_1297707_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_007924078.1|1298114_1298855_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_009042383.1|1299059_1299926_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_007924076.1|1300134_1300878_+	UMP kinase	NA	NA	NA	NA	NA
WP_009047212.1|1300874_1301432_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_009047213.1|1301448_1302204_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	38.8	1.0e-18
WP_081362560.1|1302203_1303010_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_162094490.1|1303006_1304197_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_162094491.1|1304250_1305603_+|protease	sigma E protease regulator RseP	protease	NA	NA	NA	NA
WP_062823537.1|1305677_1308065_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_007924063.1|1308110_1308614_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_162094492.1|1308617_1309673_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_007924058.1|1309782_1310223_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_007924057.1|1310219_1310996_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_081362557.1|1310998_1312129_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_016705311.1|1312140_1312773_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	38.9	1.7e-27
WP_096373187.1|1312842_1316367_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	37.9	1.1e-195
WP_016705313.1|1316507_1317455_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_124298606.1|1317574_1318903_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_007924045.1|1319177_1320809_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.5	6.9e-158
WP_009047224.1|1320814_1321660_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.8	1.2e-49
WP_162094493.1|1321817_1323107_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	6.9e-137
WP_007924039.1|1323279_1323558_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_023969802.1|1323554_1324262_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_009047227.1|1324427_1325324_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_162094494.1|1325430_1326543_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.2	8.3e-30
WP_162094495.1|1326625_1327477_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_007924033.1|1327529_1328003_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_162094496.1|1327999_1329058_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_009047229.1|1329045_1329795_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.6	1.4e-68
WP_025806642.1|1329794_1330472_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	8.9e-43
WP_007924027.1|1330681_1331515_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	33.3	6.3e-06
WP_007924026.1|1331621_1332626_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
WP_007924025.1|1333127_1333451_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_162094497.1|1333593_1336173_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.5	1.8e-27
WP_009047291.1|1336369_1337095_+	helix-turn-helix transcriptional regulator	NA	B5TK58	Pseudomonas_phage	91.0	2.9e-124
WP_081363260.1|1337638_1337830_+	Com family DNA-binding transcriptional regulator	NA	B5TK59	Pseudomonas_phage	82.9	4.6e-13
WP_162094498.1|1337834_1338416_+	DUF642 domain-containing protein	NA	NA	NA	NA	NA
WP_053277657.1|1338518_1338866_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	87.7	7.7e-51
WP_162094499.1|1339032_1339797_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	26.3	1.2e-06
WP_162094500.1|1340019_1340544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094501.1|1340547_1341156_+|plate	phage baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	59.0	1.4e-47
WP_162094502.1|1341169_1341502_+|plate	phage baseplate protein	plate	A0A2H4JI46	uncultured_Caudovirales_phage	68.2	1.4e-36
WP_162094503.1|1341498_1342494_+|plate	baseplate J protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	62.3	3.1e-108
WP_162094504.1|1342490_1343225_+|tail	phage tail protein I	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	52.0	4.1e-41
WP_124307759.1|1343221_1343752_+	hypothetical protein	NA	A2I2X8	Vibrio_virus	63.1	6.9e-51
WP_124307760.1|1343904_1344522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029526050.1|1344573_1344780_+	hypothetical protein	NA	A0A1L5C071	Aquamicrobium_phage	47.6	5.9e-06
WP_162094505.1|1344867_1345089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016701993.1|1345091_1346258_+|tail	tail protein	tail	B0ZSG8	Halomonas_phage	57.5	1.1e-125
WP_028681839.1|1346257_1346764_+|tail	phage tail protein	tail	Q6R4W3	Vibrio_virus	36.9	2.1e-25
WP_081362543.1|1346891_1347473_+|tail	phage tail assembly protein	tail	B0ZSH0	Halomonas_phage	39.4	9.1e-28
WP_162094506.1|1347601_1349863_+|tail	phage tail tape measure protein	tail	A0A2H4JAA5	uncultured_Caudovirales_phage	41.7	6.3e-08
WP_150085065.1|1349862_1350246_+|tail	phage tail protein	tail	A0A2H4JAC8	uncultured_Caudovirales_phage	54.3	1.2e-33
WP_162094507.1|1350238_1350451_+|tail	phage tail protein	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	67.1	6.6e-21
WP_162094508.1|1350460_1351480_+	phage late control D family protein	NA	A0A2H4JH05	uncultured_Caudovirales_phage	56.8	2.7e-104
WP_162094509.1|1351660_1352245_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	72.0	1.5e-75
WP_007923975.1|1352241_1352424_+	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	93.3	6.5e-25
WP_162094510.1|1352423_1353920_+|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	90.6	1.7e-256
WP_007923973.1|1353986_1354334_+|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	93.9	2.9e-58
WP_162094511.1|1354330_1354627_+|tail	phage tail assembly protein	tail	B5TK69	Pseudomonas_phage	93.9	3.9e-43
WP_162094512.1|1354757_1356833_+|tail	phage tail protein	tail	B5TK70	Pseudomonas_phage	47.9	1.3e-36
WP_016702007.1|1356819_1358058_+	2-hydroxyacid dehydrogenase	NA	B5TK71	Pseudomonas_phage	75.7	5.7e-181
WP_124310462.1|1358061_1359102_+|plate	baseplate protein	plate	B5TK72	Pseudomonas_phage	82.9	1.3e-162
WP_009047314.1|1359166_1359676_+|plate	phage baseplate assembly protein	plate	B5TK73	Pseudomonas_phage	88.8	2.2e-78
WP_041985697.1|1359675_1360074_+	phage GP46	NA	B5TK74	Pseudomonas_phage	88.6	4.8e-65
WP_162094513.1|1360063_1361104_+|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	87.0	6.8e-167
WP_009042430.1|1361091_1361691_+	DUF2313 domain-containing protein	NA	B5TK76	Pseudomonas_phage	91.5	8.5e-106
WP_081362538.1|1361702_1362560_+	hypothetical protein	NA	B5TK77	Pseudomonas_phage	76.4	1.5e-23
WP_081362537.1|1362564_1363206_+	hypothetical protein	NA	B5TK78	Pseudomonas_phage	61.9	2.5e-39
WP_124307769.1|1363589_1365143_+|tail	phage tail protein	tail	A4PE45	Ralstonia_virus	54.2	1.8e-38
WP_124309891.1|1365147_1365615_+|tail	phage tail protein	tail	A0A2H4EXG4	Aeromonas_phage	35.0	1.4e-07
WP_081362535.1|1366009_1367092_+|tail	phage tail protein	tail	B5TK79	Pseudomonas_phage	56.6	4.2e-111
WP_081362534.1|1367099_1367702_+|tail	phage tail protein	tail	B5TK80	Pseudomonas_phage	49.7	1.4e-47
WP_162094514.1|1367723_1368287_+	glycoside hydrolase family 19 protein	NA	B5TK83	Pseudomonas_phage	83.9	4.4e-88
WP_162094515.1|1368268_1368805_+|lysis	lysis protein	lysis	B5TK84	Pseudomonas_phage	71.3	3.4e-61
WP_162094516.1|1368887_1369388_+	nicotinamide-nucleotide amidohydrolase family protein	NA	B5TK85	Pseudomonas_phage	86.7	1.4e-72
WP_007923942.1|1369471_1370524_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	60.9	4.4e-113
WP_162094517.1|1370532_1371000_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_009047327.1|1371045_1372161_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA	NA
WP_081362531.1|1372644_1372839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038581696.1|1372840_1373263_-	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA	NA
WP_151263708.1|1373452_1374163_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_162094518.1|1374497_1375148_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_096373215.1|1375223_1375586_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_009047332.1|1375582_1376509_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009047333.1|1376642_1377422_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_124307775.1|1377494_1378190_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_009047336.1|1379207_1379669_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	51.3	8.5e-37
WP_009047337.1|1379735_1380446_-	RNA-binding protein S4	NA	NA	NA	NA	NA
WP_096373218.1|1380528_1381002_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_038581685.1|1381108_1382446_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_081362525.1|1382778_1384680_+	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	35.0	1.2e-76
WP_162094519.1|1384883_1386179_-	virulence factor family protein	NA	NA	NA	NA	NA
WP_009047343.1|1386178_1388827_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
WP_124301199.1|1389763_1390828_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_096373224.1|1390857_1391811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094520.1|1391828_1393544_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP048051	Pseudomonas chlororaphis subsp. aurantiaca strain zm-1 chromosome, complete genome	6861331	2162044	2244023	6861331	terminase,protease,tail,integrase,holin,tRNA,portal,plate,lysis,head,capsid	uncultured_Caudovirales_phage(57.89%)	84	2159552:2159568	2236154:2236170
2159552:2159568	attL	CCCTGGATCGTGCGCGG	NA	NA	NA	NA
WP_162094730.1|2162044_2163064_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_162094731.1|2163166_2164258_+|integrase	site-specific integrase	integrase	L7TP61	Pseudomonas_virus	74.7	1.3e-157
WP_162094732.1|2164347_2165400_+	DNA cytosine methyltransferase	NA	R4TMW4	Halovirus	31.0	4.5e-25
WP_162094733.1|2165412_2167389_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_162094734.1|2167394_2168621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094735.1|2168676_2168940_-	Pyocin activator protein PrtN	NA	A0A2K8HN48	Pseudomonas_phage	62.5	3.0e-23
WP_162094736.1|2169424_2169961_-	phosphohydrolase	NA	A0A1W6JP41	Morganella_phage	39.8	3.2e-19
WP_162094737.1|2169957_2170179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094738.1|2170175_2170595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094739.1|2170640_2170964_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_162094740.1|2171119_2171404_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_162094741.1|2171417_2172008_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094742.1|2172257_2172977_-	helix-turn-helix transcriptional regulator	NA	G9L676	Escherichia_phage	48.3	2.5e-35
WP_124324177.1|2173078_2173303_+	helix-turn-helix transcriptional regulator	NA	A0A127KNT2	Pseudomonas_phage	52.3	1.7e-11
WP_162094743.1|2173630_2174149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094744.1|2174141_2174369_+	TraR/DksA family transcriptional regulator	NA	A0A218M4I6	Erwinia_phage	48.0	3.1e-08
WP_162094745.1|2174358_2176578_+	conjugal transfer protein TraC	NA	A0A2D1GN57	Marinobacter_phage	47.4	2.9e-191
WP_162094746.1|2176570_2176930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124302628.1|2177469_2177814_+|holin	pyocin R2, holin	holin	A0A2H4J893	uncultured_Caudovirales_phage	81.5	5.3e-44
WP_162094747.1|2177959_2178562_+|terminase	terminase small subunit	terminase	A0A2H4JG15	uncultured_Caudovirales_phage	60.2	2.5e-52
WP_162094748.1|2178566_2180588_+|terminase	phage terminase large subunit family protein	terminase	A0A2H4J898	uncultured_Caudovirales_phage	79.3	0.0e+00
WP_124334384.1|2180589_2180796_+	hypothetical protein	NA	A0A2H4JA19	uncultured_Caudovirales_phage	73.5	7.6e-22
WP_162094749.1|2180795_2182277_+|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	84.2	1.2e-241
WP_162094750.1|2182273_2183419_+|protease	Clp protease ClpP	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	70.8	3.9e-139
WP_162094751.1|2183415_2183760_+|head	head decoration protein	head	A0A2H4JF15	uncultured_Caudovirales_phage	86.8	1.4e-47
WP_162094752.1|2183925_2184921_+|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	86.1	5.1e-164
WP_162094753.1|2184923_2185244_+	hypothetical protein	NA	A0A2H4J879	uncultured_Caudovirales_phage	66.7	5.0e-36
WP_162094754.1|2185240_2185906_+	hypothetical protein	NA	A0A2H4JBV1	uncultured_Caudovirales_phage	69.1	1.1e-82
WP_162094755.1|2185898_2186429_+	hypothetical protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	57.1	2.3e-54
WP_162094756.1|2186425_2187007_+|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	71.7	2.7e-56
WP_124335786.1|2187112_2187304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_123573986.1|2187308_2187635_+|plate	phage baseplate protein	plate	A0A2H4JA09	uncultured_Caudovirales_phage	60.4	4.1e-30
WP_162094757.1|2187631_2188516_+|plate	baseplate assembly protein	plate	A0A2H4JFK9	uncultured_Caudovirales_phage	68.0	9.7e-106
WP_162094758.1|2188517_2189129_+|tail	phage tail protein I	tail	A0A2H4JDH5	uncultured_Caudovirales_phage	69.7	3.0e-66
WP_162094759.1|2189121_2190714_+|tail	phage tail protein	tail	A0A077K818	Ralstonia_phage	52.1	3.1e-70
WP_162094760.1|2190724_2191153_+|tail	phage tail protein	tail	B5TK82	Pseudomonas_phage	41.7	3.3e-27
WP_162094761.1|2191258_2192419_+|tail	phage tail sheath family protein	tail	A0A2H4J869	uncultured_Caudovirales_phage	77.1	1.5e-167
WP_162094762.1|2192430_2192940_+|tail	phage major tail tube protein	tail	A0A2H4JBU0	uncultured_Caudovirales_phage	68.9	3.4e-63
WP_162094763.1|2192955_2193267_+|tail	phage tail assembly protein	tail	A0A2H4J873	uncultured_Caudovirales_phage	52.6	7.5e-21
WP_162094764.1|2193416_2196017_+|tail	phage tail tape measure protein	tail	A0A2H4JG00	uncultured_Caudovirales_phage	33.8	1.6e-79
WP_162094765.1|2196029_2196875_+|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	72.5	3.5e-113
WP_162094766.1|2196849_2197056_+|tail	phage tail protein	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	74.6	7.6e-22
WP_162094767.1|2197052_2197523_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094768.1|2197666_2198716_+	late control protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	78.3	1.9e-148
WP_124313093.1|2198767_2199322_+	glycoside hydrolase family 19 protein	NA	B5TK83	Pseudomonas_phage	77.6	3.5e-77
WP_162094769.1|2199312_2199855_+|lysis	lysis protein	lysis	B5TK84	Pseudomonas_phage	64.9	1.2e-50
WP_162094770.1|2200005_2200800_+	DNA adenine methylase	NA	C7BGE1	Burkholderia_phage	66.2	2.2e-101
WP_124315159.1|2200865_2201102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_135006675.1|2201129_2201498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094771.1|2201482_2202265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094772.1|2202275_2202821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081362204.1|2203303_2203942_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
WP_162094773.1|2204036_2204891_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_038580567.1|2204943_2205432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094774.1|2205689_2207252_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_162094775.1|2207255_2207846_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_162094776.1|2208033_2208870_+	arylamine N-acetyltransferase	NA	NA	NA	NA	NA
WP_162094777.1|2208882_2209305_-	DUF4952 domain-containing protein	NA	NA	NA	NA	NA
WP_038631261.1|2209366_2209786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124310754.1|2210025_2211564_+	purine permease	NA	NA	NA	NA	NA
WP_162094778.1|2211570_2212728_-	MFS transporter	NA	NA	NA	NA	NA
WP_007923734.1|2213634_2213868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023968605.1|2213874_2214069_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124298917.1|2214203_2215400_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_124308073.1|2215732_2217748_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
WP_007922014.1|2217988_2219470_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009048089.1|2220403_2220943_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_162094779.1|2220972_2221806_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_009048091.1|2221854_2222292_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_124298922.1|2222391_2223351_+|tRNA	tRNA dihydrouridine(16) synthase DusC	tRNA	NA	NA	NA	NA
WP_038580533.1|2223472_2223919_+	Hsp20 family protein	NA	A0A1D8KN82	Synechococcus_phage	37.0	2.2e-18
WP_081362189.1|2224105_2224804_+	DUF1266 domain-containing protein	NA	NA	NA	NA	NA
WP_162094780.1|2224800_2227485_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_162094781.1|2227481_2229173_-	molecular chaperone HscC	NA	M4R062	Micromonas_pusilla_virus	38.5	1.8e-76
WP_124310758.1|2229281_2232560_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	31.2	3.8e-14
WP_009048097.1|2232641_2233532_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009043027.1|2233677_2235096_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_009048098.1|2235106_2235751_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_162094782.1|2235978_2237061_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
2236154:2236170	attR	CCCTGGATCGTGCGCGG	NA	NA	NA	NA
WP_007921989.1|2237115_2238228_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_162094783.1|2238412_2239423_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_162094784.1|2239625_2242229_+	FimV family protein	NA	NA	NA	NA	NA
WP_162094785.1|2242308_2242968_-	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_162096379.1|2243198_2244023_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
>prophage 3
NZ_CP048051	Pseudomonas chlororaphis subsp. aurantiaca strain zm-1 chromosome, complete genome	6861331	2278073	2325972	6861331	terminase,protease,tail,integrase,holin,tRNA,coat	Pseudomonas_phage(52.17%)	66	2275973:2275989	2291338:2291354
2275973:2275989	attL	GCCGCGGCGAAGAAGAA	NA	NA	NA	NA
WP_162094793.1|2278073_2280452_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_002553164.1|2280455_2280758_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	38.9	1.8e-11
WP_007920509.1|2280738_2281095_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_162094794.1|2281332_2282511_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A059VF45	Pseudomonas_phage	66.6	1.1e-152
WP_162096380.1|2283601_2283928_-	hypothetical protein	NA	A0A2H4J7B8	uncultured_Caudovirales_phage	81.5	2.7e-45
WP_162094795.1|2284808_2285702_+|protease	serine protease	protease	Q6JKF3	Neodiprion_sertifer_nucleopolyhedrovirus	37.7	3.2e-24
WP_162094796.1|2285729_2287892_-	DNA cytosine methyltransferase	NA	Q5QF27	Pseudomonas_virus	62.6	1.7e-260
WP_162094797.1|2287948_2288662_+	hypothetical protein	NA	Q858S6	Enterobacteria_phage	34.8	2.7e-05
WP_162094798.1|2288949_2289417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094799.1|2289578_2289797_-	hypothetical protein	NA	A0A1B0Z2L8	Pseudomonas_phage	56.5	1.3e-11
WP_162094800.1|2289981_2290764_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094801.1|2290881_2291094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094802.1|2291094_2291406_-	hypothetical protein	NA	A0A2H4JAQ1	uncultured_Caudovirales_phage	69.7	5.5e-32
2291338:2291354	attR	TTCTTCTTCGCCGCGGC	NA	NA	NA	NA
WP_162094803.1|2291484_2291946_-	hypothetical protein	NA	A0A2H4J101	uncultured_Caudovirales_phage	49.0	2.0e-38
WP_162094804.1|2291942_2292185_-	hypothetical protein	NA	A0A2H4J1H1	uncultured_Caudovirales_phage	71.2	4.7e-23
WP_081360810.1|2292181_2292949_-	recombinase	NA	A0A088C3C8	Flavobacterium_sp._phage	32.6	1.2e-08
WP_081360811.1|2292945_2293704_-	ERF family protein	NA	K4NWX3	Pseudomonas_phage	55.5	1.1e-49
WP_162094805.1|2293714_2294818_-	hypothetical protein	NA	B5WZW5	Pseudomonas_phage	61.0	3.0e-32
WP_053278234.1|2295094_2295289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038633044.1|2295285_2295477_-	hypothetical protein	NA	A0A1B0VMB8	Pseudomonas_phage	48.4	6.8e-09
WP_162094806.1|2295473_2295905_-	hypothetical protein	NA	A0A1B0VMC3	Pseudomonas_phage	39.4	5.7e-11
WP_162094807.1|2295925_2296219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037005894.1|2296591_2296828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094808.1|2297044_2297905_-	ParB N-terminal domain-containing protein	NA	A0A1B0YZX8	Pseudomonas_phage	68.4	7.2e-90
WP_162094809.1|2298414_2298732_+	DUF1654 domain-containing protein	NA	A0A2D1GND3	Pseudomonas_phage	55.2	9.6e-24
WP_162094810.1|2298870_2299083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094135.1|2299530_2300028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094811.1|2300017_2300347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094812.1|2300461_2300686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094813.1|2300723_2300933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094814.1|2300939_2301857_-	S24 family peptidase	NA	H2BD63	Pseudomonas_phage	39.0	2.4e-43
WP_162094815.1|2301963_2302170_+	Cro/Cl family transcriptional regulator	NA	A0A2R2Z333	Escherichia_phage	49.2	1.5e-06
WP_162094816.1|2302237_2302660_+	Rha family transcriptional regulator	NA	A0A2D1GNM7	Pseudomonas_phage	50.0	8.9e-33
WP_162094817.1|2302661_2303633_+	phage replication protein	NA	A0A1B0VME0	Pseudomonas_phage	69.1	1.3e-111
WP_162094818.1|2303619_2304420_+	hypothetical protein	NA	A0A1B0VMD9	Pseudomonas_phage	71.5	1.5e-97
WP_162094819.1|2304416_2304641_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094820.1|2304637_2305108_+	hypothetical protein	NA	A0A2H4J106	uncultured_Caudovirales_phage	59.0	4.7e-51
WP_162094821.1|2305104_2305686_+	recombination protein NinG	NA	A0A059VA66	Pseudomonas_phage	65.8	9.6e-70
WP_162094822.1|2305682_2306369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094823.1|2306527_2307013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094824.1|2307112_2307310_+	hypothetical protein	NA	H2BDJ2	Pseudomonas_virus	55.7	1.2e-08
WP_162096381.1|2307298_2307598_-	hypothetical protein	NA	A0A2H4J0J5	uncultured_Caudovirales_phage	52.5	1.3e-22
WP_041983323.1|2307707_2308040_+|holin	phage holin, lambda family	holin	A0A1W6JTC7	Pseudomonas_phage	72.9	2.3e-36
WP_162094825.1|2308044_2308341_+	hypothetical protein	NA	V5K3F8	Pseudomonas_phage	34.0	1.1e-10
WP_081360834.1|2308836_2309052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094826.1|2309126_2309741_+	hypothetical protein	NA	A0A1B0VRJ1	Pseudomonas_phage	87.9	9.1e-103
WP_009048040.1|2309773_2310250_+	DUF2280 domain-containing protein	NA	A0A1B0VMH2	Pseudomonas_phage	79.7	1.1e-66
WP_162094827.1|2310224_2311544_+|terminase	terminase	terminase	A0A1B0VP58	Pseudomonas_phage	93.3	9.3e-246
WP_162094828.1|2311546_2312923_+	DUF4055 domain-containing protein	NA	A0A0H5AWC7	Pseudomonas_phage	63.2	2.2e-165
WP_162094829.1|2312923_2314036_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	52.7	9.9e-108
WP_162094830.1|2314324_2314573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094831.1|2314699_2315488_+	hypothetical protein	NA	A0A0S2SY92	Pseudomonas_phage	58.1	2.2e-61
WP_162094832.1|2315563_2316712_+|coat	P22 coat - protein 5 family protein	coat	G8C7P7	Escherichia_phage	44.6	4.3e-82
WP_162094833.1|2316769_2317105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094834.1|2317106_2317601_+	hypothetical protein	NA	A0A2H4J970	uncultured_Caudovirales_phage	49.4	3.5e-28
WP_162094835.1|2317597_2317903_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094836.1|2317942_2318332_+	hypothetical protein	NA	A0A2H4JAS3	uncultured_Caudovirales_phage	61.5	2.3e-35
WP_162094837.1|2318280_2318961_+	hypothetical protein	NA	A0A1B0VMI1	Pseudomonas_phage	59.0	4.6e-63
WP_162094838.1|2318960_2319380_+	hypothetical protein	NA	A0A1X7QH34	Escherichia_phage	34.7	1.4e-09
WP_162094839.1|2319451_2320108_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	50.7	4.6e-52
WP_038578407.1|2320111_2320492_+	hypothetical protein	NA	A0A2H4IYQ5	uncultured_Caudovirales_phage	51.2	6.5e-27
WP_162096382.1|2320536_2320809_+	DUF1799 domain-containing protein	NA	A0A2H4J4F7	uncultured_Caudovirales_phage	55.1	1.3e-16
WP_162094840.1|2320805_2324117_+|tail	phage tail tape measure protein	tail	A0A1B0VMG8	Pseudomonas_phage	40.8	2.8e-134
WP_081360850.1|2324116_2324455_+|tail	phage tail protein	tail	A0A2H4JI07	uncultured_Caudovirales_phage	77.7	2.1e-48
WP_162094841.1|2324464_2325214_+|tail	phage minor tail protein L	tail	A0A2H4J4Q5	uncultured_Caudovirales_phage	84.3	1.9e-126
WP_162094842.1|2325216_2325972_+|tail	phage tail protein	tail	A0A2H4J1J7	uncultured_Caudovirales_phage	84.5	2.5e-131
>prophage 4
NZ_CP048051	Pseudomonas chlororaphis subsp. aurantiaca strain zm-1 chromosome, complete genome	6861331	2330484	2342152	6861331	tail	Pseudomonas_phage(60.0%)	13	NA	NA
WP_162094848.1|2330484_2330907_+	hypothetical protein	NA	A0A1B0VMK5	Pseudomonas_phage	54.0	2.6e-32
WP_162094849.1|2330950_2331559_+|tail	tail assembly protein	tail	A0A2H4J1H0	uncultured_Caudovirales_phage	66.5	2.2e-64
WP_162094850.1|2331616_2334892_+	host specificity protein J	NA	A0A2H4J8Z6	uncultured_Caudovirales_phage	62.0	0.0e+00
WP_162094851.1|2334888_2335212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162094852.1|2335211_2335892_+	hypothetical protein	NA	A0A2D1GNS6	Pseudomonas_phage	41.1	3.1e-43
WP_162094853.1|2335916_2336885_+	hypothetical protein	NA	A0A2H4J1J6	uncultured_Caudovirales_phage	57.4	3.4e-96
WP_162094854.1|2336984_2337530_+	hypothetical protein	NA	A0A2H4P763	Pseudomonas_phage	36.4	1.4e-17
WP_162094855.1|2337529_2337955_+	cell wall hydrolase	NA	A0A1B0VMI2	Pseudomonas_phage	80.9	6.8e-65
WP_162094856.1|2337954_2338326_+	hypothetical protein	NA	J7HXL1	Pseudomonas_phage	46.6	4.9e-19
WP_162094857.1|2338322_2338580_+	hypothetical protein	NA	A0A125RNP3	Pseudomonas_phage	66.7	3.3e-22
WP_162094858.1|2338623_2338968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094859.1|2339490_2340126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162094860.1|2340931_2342152_-	acyltransferase	NA	A0A2H4JA46	uncultured_Caudovirales_phage	38.9	7.9e-50
>prophage 5
NZ_CP048051	Pseudomonas chlororaphis subsp. aurantiaca strain zm-1 chromosome, complete genome	6861331	4354867	4361125	6861331	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
WP_009049761.1|4354867_4355260_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	84.6	6.7e-59
WP_038577889.1|4355263_4355626_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	74.2	2.5e-44
WP_162095672.1|4355625_4355925_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	69.7	2.4e-32
WP_025804683.1|4355921_4356257_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	82.0	1.9e-46
WP_162095673.1|4356253_4357255_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	85.1	1.5e-166
WP_124336981.1|4357343_4358351_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_124311613.1|4358449_4359844_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_009049768.1|4359844_4361125_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.1	2.1e-101
>prophage 7
NZ_CP048051	Pseudomonas chlororaphis subsp. aurantiaca strain zm-1 chromosome, complete genome	6861331	6303674	6357304	6861331	protease,holin	Burkholderia_phage(25.0%)	48	NA	NA
WP_009051216.1|6303674_6304175_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_124300663.1|6304500_6305388_+	acyltransferase	NA	NA	NA	NA	NA
WP_162096225.1|6305388_6305961_-	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
WP_124337454.1|6306605_6306860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162096226.1|6306869_6307823_+	CHAP domain-containing protein	NA	NA	NA	NA	NA
WP_162096227.1|6307819_6308386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009045939.1|6308448_6309648_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	29.3	6.5e-12
WP_009051219.1|6309855_6310713_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_009051220.1|6310873_6311506_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
WP_162096228.1|6311652_6314670_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
WP_009051222.1|6314666_6314996_-	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_009051223.1|6315010_6316261_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
WP_041984857.1|6316284_6317538_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	1.1e-99
WP_162096229.1|6317985_6318729_-	conjugal transfer protein TraX	NA	NA	NA	NA	NA
WP_009051226.1|6318953_6319994_+	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_124337307.1|6320162_6321608_+	cytosine permease	NA	NA	NA	NA	NA
WP_162096230.1|6321604_6322429_+	carbon-nitrogen hydrolase	NA	M1HUK8	Acanthocystis_turfacea_Chlorella_virus	34.5	2.3e-21
WP_028684188.1|6322566_6323391_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_023969192.1|6323581_6324682_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
WP_009051231.1|6324724_6324955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081359554.1|6324966_6326262_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
WP_096375667.1|6327117_6327888_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_038575198.1|6327903_6329124_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_016704210.1|6329123_6331073_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA	NA
WP_081359552.1|6331213_6333274_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
WP_003228980.1|6333289_6333820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007926352.1|6333984_6334962_-	membrane dipeptidase	NA	NA	NA	NA	NA
WP_081359551.1|6335189_6335591_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_123410949.1|6335796_6336051_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	64.3	1.3e-23
WP_081359550.1|6335989_6336358_+	helix-turn-helix transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	69.2	1.5e-31
WP_124335652.1|6336391_6336808_+	DUF3010 family protein	NA	NA	NA	NA	NA
WP_151264737.1|6336909_6337857_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_009051242.1|6338050_6338995_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_009051243.1|6339068_6339956_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_016704215.1|6340144_6341110_+	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
WP_038575184.1|6341267_6341744_+	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_162096231.1|6341769_6342933_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
WP_007925996.1|6343302_6343563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124309721.1|6343625_6344072_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_009045963.1|6344072_6345167_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_009051249.1|6345694_6347071_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_009051250.1|6347497_6348454_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_007925985.1|6348524_6349370_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_124339207.1|6349366_6350545_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	37.6	4.5e-26
WP_038575177.1|6350826_6352824_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	28.3	8.2e-20
WP_023969214.1|6353248_6353842_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_007925976.1|6353955_6355428_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_016704223.1|6355600_6357304_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	30.1	7.7e-51
