The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP048031	Shewanella sp. Arc9-LZ chromosome, complete genome	4911031	1281020	1288516	4911031		Staphylococcus_phage(50.0%)	7	NA	NA
WP_011636506.1|1281020_1282688_-	energy-dependent translational throttle protein EttA	NA	A0A1V0SKJ1	Klosneuvirus	26.7	1.0e-39
WP_162022543.1|1282949_1284203_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	53.5	2.5e-99
WP_011636508.1|1284317_1284767_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_162022544.1|1284840_1285986_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.2	1.7e-49
WP_162022545.1|1286049_1286709_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	29.9	4.8e-25
WP_162022546.1|1286812_1287916_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	38.6	3.5e-65
WP_011636512.1|1288039_1288516_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	46.4	1.0e-29
>prophage 2
NZ_CP048031	Shewanella sp. Arc9-LZ chromosome, complete genome	4911031	1864603	1874451	4911031		Faustovirus(14.29%)	9	NA	NA
WP_101088128.1|1864603_1865818_+	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	1.3e-31
WP_011637877.1|1865890_1866274_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	1.2e-52
WP_011637876.1|1866288_1866612_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	40.2	1.7e-20
WP_101088130.1|1866668_1867193_+	co-chaperone HscB	NA	NA	NA	NA	NA
WP_162022808.1|1867265_1869125_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	39.8	8.0e-102
WP_101088135.1|1869133_1869469_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_101088137.1|1869641_1870538_+	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	36.7	1.5e-37
WP_041413046.1|1870702_1871134_+	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	41.7	2.2e-18
WP_101088139.1|1871922_1874451_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	24.6	1.3e-33
>prophage 3
NZ_CP048031	Shewanella sp. Arc9-LZ chromosome, complete genome	4911031	1994930	2036380	4911031	terminase,protease,portal,integrase	Vibrio_phage(42.86%)	54	1992550:1992565	2024554:2024569
1992550:1992565	attL	GCCATTTGCATCGGTT	NA	NA	NA	NA
WP_162022862.1|1994930_1996142_+|integrase	tyrosine-type recombinase/integrase	integrase	G3CFG6	Escherichia_phage	41.2	3.4e-85
WP_041412895.1|1996138_1996360_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162022863.1|1996481_1996724_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162022864.1|1996720_1997023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162022865.1|1997023_1997287_-	hypothetical protein	NA	A0A2I7RHR8	Vibrio_phage	47.1	1.7e-13
WP_162022866.1|1997283_1997931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162022867.1|1997927_1998452_-	hypothetical protein	NA	A0A2I7R165	Vibrio_phage	28.6	3.8e-09
WP_162022868.1|1998473_1998809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162022869.1|1998817_1998979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162022870.1|1998975_1999299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162022871.1|1999450_1999867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022872.1|1999869_2000556_-	helix-turn-helix transcriptional regulator	NA	R9TNM0	Vibrio_phage	54.1	2.3e-62
WP_137225729.1|2000660_2000846_+	Cro/Cl family transcriptional regulator	NA	A0A0S2SYB8	Pseudomonas_phage	44.6	4.7e-07
WP_162022873.1|2000873_2001467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022874.1|2001468_2001672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022875.1|2002566_2003322_+	helix-turn-helix domain-containing protein	NA	Q8HA96	Salmonella_phage	66.7	4.0e-28
WP_162022876.1|2003318_2003984_+	replication protein P	NA	NA	NA	NA	NA
WP_162022877.1|2003976_2004198_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022878.1|2004200_2005460_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A067ZJC5	Vibrio_phage	33.8	1.7e-50
WP_162024324.1|2005514_2005733_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162022879.1|2005719_2006088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022880.1|2006845_2007838_+	trypsin-like peptidase domain-containing protein	NA	S5FV10	Shigella_phage	26.9	2.4e-12
WP_162022881.1|2008012_2008585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022882.1|2008695_2008947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022883.1|2009158_2010025_+	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_162022884.1|2010387_2010738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022885.1|2011157_2011496_+	DUF1232 domain-containing protein	NA	A0A2I7S9Z5	Vibrio_phage	42.7	1.5e-11
WP_162022886.1|2011607_2011982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022887.1|2012375_2012747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022888.1|2012913_2013498_-	Rha family transcriptional regulator	NA	Q8H9L9	Vibrio_phage	48.6	1.2e-19
WP_162022889.1|2013582_2013732_-	ash family protein	NA	NA	NA	NA	NA
WP_162022890.1|2013863_2014370_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162024325.1|2014811_2015039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022891.1|2015255_2016017_+	hypothetical protein	NA	A0A0U1W0F5	Pseudomonas_phage	20.5	3.0e-07
WP_162022892.1|2016223_2017351_+	DUF4935 domain-containing protein	NA	NA	NA	NA	NA
WP_162022893.1|2017457_2018051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022894.1|2018410_2018878_+	lysozyme	NA	A0A1S5R1I9	Pseudomonas_phage	51.9	2.8e-35
WP_162022895.1|2018877_2019315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022896.1|2019413_2019758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140235028.1|2019761_2020295_+|terminase	terminase small subunit	terminase	O64316	Escherichia_phage	50.0	9.8e-37
WP_162022897.1|2020269_2022252_+|terminase	phage terminase large subunit family protein	terminase	A0A1B0Z2K0	Pseudomonas_phage	49.5	2.5e-194
WP_011637143.1|2022251_2022455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022898.1|2022463_2024023_+|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	49.3	4.5e-130
WP_162024326.1|2023988_2026004_+|protease	Clp protease ClpP	protease	K7PKX4	Enterobacterial_phage	51.1	1.8e-179
2024554:2024569	attR	AACCGATGCAAATGGC	NA	NA	NA	NA
WP_162022899.1|2026108_2026429_+	DUF2190 family protein	NA	K7PJY3	Enterobacterial_phage	47.7	1.1e-14
WP_162022900.1|2026421_2026748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022901.1|2026757_2027309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022902.1|2027334_2027760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022903.1|2027756_2028476_+	hypothetical protein	NA	A0A2I7S8N4	Vibrio_phage	34.4	5.6e-27
WP_162022904.1|2028511_2028838_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162022905.1|2028940_2032414_+	tape measure protein	NA	A0A2I7S9D9	Vibrio_phage	39.2	1.5e-40
WP_123778876.1|2032450_2032828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162022906.1|2032862_2035301_+	hypothetical protein	NA	A0A2I7QRV0	Vibrio_phage	62.3	2.1e-288
WP_162022907.1|2035375_2036380_+	hypothetical protein	NA	A0A088C4T9	Shewanella_sp._phage	40.1	3.9e-63
>prophage 4
NZ_CP048031	Shewanella sp. Arc9-LZ chromosome, complete genome	4911031	2157578	2166534	4911031	tRNA	uncultured_Caudovirales_phage(33.33%)	10	NA	NA
WP_162022961.1|2157578_2160236_+	DUF87 domain-containing protein	NA	A0A218M9A2	Mycobacterium_phage	47.2	1.2e-82
WP_162024330.1|2160238_2160883_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_162022962.1|2160891_2162223_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.0	2.8e-80
WP_101087633.1|2162215_2162590_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	36.5	3.0e-08
WP_101087634.1|2162608_2163895_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	42.9	1.2e-93
WP_101087635.1|2164406_2164745_-	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA	NA
WP_162022963.1|2164738_2165047_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_162022964.1|2165043_2165400_-	sulfurtransferase complex subunit TusC	NA	NA	NA	NA	NA
WP_162022965.1|2165419_2165809_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	39.4	8.8e-19
WP_101087639.1|2165874_2166534_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	44.9	3.0e-35
