assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009938075.1_ASM993807v1	NZ_CP038995	Enterococcus faecium strain ZY11 chromosome, complete genome	1	542981-543232	1	PILER-CR	no		cas3,cas14j,DEDDh,cas2,DinG,csa3,RT	Orphan	AAATCAACCGAGAACAGTAGATGTTCGAGAAAACTTGCAGAATACTACAA	50	0	0	NA	NA	NA	2	2	Orphan	cas3,cas14j,DEDDh,cas2,DinG,csa3,RT	NA|293aa|up_1|NZ_CP038995.1_539776_540655_+,NA|79aa|up_0|NZ_CP038995.1_540674_540911_+,NA|66aa|down_0|NZ_CP038995.1_543578_543776_+,NA|204aa|down_1|NZ_CP038995.1_543779_544391_+,NA|96aa|down_3|NZ_CP038995.1_545982_546270_+,NA|165aa|down_4|NZ_CP038995.1_546289_546784_+,NA|117aa|down_5|NZ_CP038995.1_546824_547175_+,NA|477aa|down_7|NZ_CP038995.1_548520_549951_+,NA|304aa|down_8|NZ_CP038995.1_550055_550967_+	NA|258aa|up_9|NZ_CP038995.1_531882_532656_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|429aa|up_8|NZ_CP038995.1_532668_533955_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|412aa|up_7|NZ_CP038995.1_533951_535187_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|157aa|up_6|NZ_CP038995.1_535173_535644_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|464aa|up_5|NZ_CP038995.1_535648_537040_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|381aa|up_4|NZ_CP038995.1_537137_538280_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|266aa|up_3|NZ_CP038995.1_538330_539128_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|101aa|up_2|NZ_CP038995.1_539329_539632_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|293aa|up_1|NZ_CP038995.1_539776_540655_+	NA	NA|79aa|up_0|NZ_CP038995.1_540674_540911_+	NA	NA|66aa|down_0|NZ_CP038995.1_543578_543776_+	NA	NA|204aa|down_1|NZ_CP038995.1_543779_544391_+	NA	NA|464aa|down_2|NZ_CP038995.1_544375_545767_+	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|96aa|down_3|NZ_CP038995.1_545982_546270_+	NA	NA|165aa|down_4|NZ_CP038995.1_546289_546784_+	NA	NA|117aa|down_5|NZ_CP038995.1_546824_547175_+	NA	NA|310aa|down_6|NZ_CP038995.1_547422_548352_+	PHA03332, PHA03332, membrane glycoprotein; Provisional	NA|477aa|down_7|NZ_CP038995.1_548520_549951_+	NA	NA|304aa|down_8|NZ_CP038995.1_550055_550967_+	NA	NA|381aa|down_9|NZ_CP038995.1_551300_552443_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons
GCF_009938075.1_ASM993807v1	NZ_CP038995	Enterococcus faecium strain ZY11 chromosome, complete genome	2	2289805-2289914	1	CRISPRCasFinder	no		cas3,cas14j,DEDDh,cas2,DinG,csa3,RT	Orphan	CTTTGCTCAACCAGTATTATTCATCA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,DEDDh,cas2,DinG,csa3,RT	NA,NA	NA|720aa|up_9|NZ_CP038995.1_2278392_2280552_+	PRK07306, PRK07306, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|322aa|up_8|NZ_CP038995.1_2280601_2281567_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|380aa|up_7|NZ_CP038995.1_2281655_2282795_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|238aa|up_6|NZ_CP038995.1_2283103_2283817_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|234aa|up_5|NZ_CP038995.1_2284070_2284772_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|511aa|up_4|NZ_CP038995.1_2285005_2286538_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|401aa|up_3|NZ_CP038995.1_2286728_2287931_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|230aa|up_2|NZ_CP038995.1_2288012_2288702_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|123aa|up_1|NZ_CP038995.1_2288807_2289176_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|168aa|up_0|NZ_CP038995.1_2289228_2289732_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|230aa|down_0|NZ_CP038995.1_2290141_2290831_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|141aa|down_1|NZ_CP038995.1_2290934_2291357_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|223aa|down_2|NZ_CP038995.1_2291699_2292368_+	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|291aa|down_3|NZ_CP038995.1_2292380_2293253_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|340aa|down_4|NZ_CP038995.1_2293343_2294363_-	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain	NA|296aa|down_5|NZ_CP038995.1_2294535_2295423_-	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|182aa|down_6|NZ_CP038995.1_2295499_2296045_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|57aa|down_7|NZ_CP038995.1_2296145_2296316_-	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|51aa|down_8|NZ_CP038995.1_2296339_2296492_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|215aa|down_9|NZ_CP038995.1_2296653_2297298_+	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
