assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009938015.1_ASM993801v1	NZ_AP021884	Sulfuriferula plumbiphila strain Gro7	1	1148298-1148383	1	CRISPRCasFinder	no	cas5,cas6e,cas2	csa3,cas3,cas5,cas6e,cas2,DEDDh,DinG,WYL,cas8c,cas7,cas4,cas1	Unclear	GTGTTCCCCGCACCCGCGGGGATGA	25	0	0	NA	NA	I-E	1	1	Unclear	csa3,cas3,cas5,cas6e,cas2,DEDDh,DinG,WYL,cas8c,cas7,cas4,cas1	NA,NA	NA|215aa|up_9|NZ_AP021884.1_1137963_1138608_-	TIGR01262, Maleylacetoacetate_isomerase, maleylacetoacetate isomerase	NA|296aa|up_8|NZ_AP021884.1_1138856_1139744_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|682aa|up_7|NZ_AP021884.1_1139808_1141854_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|124aa|up_6|NZ_AP021884.1_1141914_1142286_-	pfam02656, DUF202, Domain of unknown function (DUF202)	NA|948aa|up_5|NZ_AP021884.1_1142295_1145139_-	PRK09277, PRK09277, aconitate hydratase AcnA	cas5|179aa|up_4|NZ_AP021884.1_1145195_1145732_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|208aa|up_3|NZ_AP021884.1_1145722_1146346_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	NA|94aa|up_2|NZ_AP021884.1_1146414_1146696_+	cd19116, AKR_AKR2E1-5, AKR2E family of aldo-keto reductase (AKR)	NA|100aa|up_1|NZ_AP021884.1_1146692_1146992_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	cas2|99aa|up_0|NZ_AP021884.1_1147906_1148203_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|300aa|down_0|NZ_AP021884.1_1148555_1149455_+	PRK08788, PRK08788, enoyl-CoA hydratase; Validated	NA|712aa|down_1|NZ_AP021884.1_1149459_1151595_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|144aa|down_2|NZ_AP021884.1_1151614_1152046_-	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins	NA|356aa|down_3|NZ_AP021884.1_1152139_1153207_-	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms]	NA|400aa|down_4|NZ_AP021884.1_1153469_1154669_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|126aa|down_5|NZ_AP021884.1_1154672_1155050_+	TIGR02970, Succinate_dehydrogenase_cytochrome_b556_subunit, succinate dehydrogenase, cytochrome b556 subunit	NA|110aa|down_6|NZ_AP021884.1_1155043_1155373_+	cd03494, SQR_TypeC_SdhD, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol	NA|588aa|down_7|NZ_AP021884.1_1155369_1157133_+	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|233aa|down_8|NZ_AP021884.1_1157132_1157831_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|72aa|down_9|NZ_AP021884.1_1157869_1158085_+	pfam03937, Sdh5, Flavinator of succinate dehydrogenase
GCF_009938015.1_ASM993801v1	NZ_AP021884	Sulfuriferula plumbiphila strain Gro7	2	1831685-1831793	2	CRISPRCasFinder	no		csa3,cas3,cas5,cas6e,cas2,DEDDh,DinG,WYL,cas8c,cas7,cas4,cas1	Orphan	GGCAGCATCACGCCTATCCAGGCCAGTCCCGGTGCGAC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas6e,cas2,DEDDh,DinG,WYL,cas8c,cas7,cas4,cas1	NA,NA	NA|319aa|up_9|NZ_AP021884.1_1818851_1819808_+	PRK12684, PRK12684, CysB family HTH-type transcriptional regulator	NA|450aa|up_8|NZ_AP021884.1_1819887_1821237_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|156aa|up_7|NZ_AP021884.1_1821238_1821706_-	PRK02967, PRK02967, nickel-responsive transcriptional regulator NikR	NA|486aa|up_6|NZ_AP021884.1_1821718_1823176_-	NF033181, NiFeSe_hydrog, nickel-dependent hydrogenase large subunit	NA|332aa|up_5|NZ_AP021884.1_1823172_1824168_-	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion]	NA|481aa|up_4|NZ_AP021884.1_1824193_1825636_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|562aa|up_3|NZ_AP021884.1_1826161_1827847_-	cd08650, FMT_core_HypX_N, HypX protein, N-terminal hydrolase domain	NA|352aa|up_2|NZ_AP021884.1_1827848_1828904_-	TIGR02124, Hydrogenase_expression/formation_protein_HypE, hydrogenase expression/formation protein HypE	NA|380aa|up_1|NZ_AP021884.1_1828900_1830040_-	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional	NA|81aa|up_0|NZ_AP021884.1_1830036_1830279_-	pfam01455, HupF_HypC, HupF/HypC family	NA|345aa|down_0|NZ_AP021884.1_1832692_1833727_-	PRK10463, PRK10463, hydrogenase nickel incorporation protein HypB; Provisional	NA|114aa|down_1|NZ_AP021884.1_1833787_1834129_-	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA	NA|368aa|down_2|NZ_AP021884.1_1834121_1835225_-	NF033181, NiFeSe_hydrog, nickel-dependent hydrogenase large subunit	NA|180aa|down_3|NZ_AP021884.1_1835224_1835764_-	pfam11939, NiFe-hyd_HybE, [NiFe]-hydrogenase assembly, chaperone, HybE	NA|72aa|down_4|NZ_AP021884.1_1835770_1835986_-	cd00730, rubredoxin, Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center	NA|261aa|down_5|NZ_AP021884.1_1836001_1836784_-	pfam04809, HupH_C, HupH hydrogenase expression protein, C-terminal conserved region	NA|164aa|down_6|NZ_AP021884.1_1836869_1837361_-	cd02965, HyaE, HyaE family; HyaE is also called HupG and HoxO	NA|103aa|down_7|NZ_AP021884.1_1837357_1837666_-	pfam01455, HupF_HypC, HupF/HypC family	NA|208aa|down_8|NZ_AP021884.1_1837670_1838294_-	TIGR00140, Hydrogenase_expression/formation_protein_HupD, hydrogenase expression/formation protein	NA|116aa|down_9|NZ_AP021884.1_1838453_1838801_-	COG3093, VapI, Plasmid maintenance system antidote protein [General function prediction only]
GCF_009938015.1_ASM993801v1	NZ_AP021884	Sulfuriferula plumbiphila strain Gro7	3	2644962-2646084	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	csa3,cas3,cas5,cas6e,cas2,DEDDh,DinG,WYL,cas8c,cas7,cas4,cas1	 Type I-U?,Type I-C,Type I-U	GCATCGCCCGGCCTCGCGGCCGGGCGCGGATTGAAAC,GCATCGCCCGGCCTCGCGGCCGGGCGCGGATTGAAAC,GCATCGCCCGGCCTCGCGGCCGGGCGCGGATTGAAAC	37,37,37	0	0	NA	NA	I-C:I-C:I-C	14,15,15	15	TypeI-U?,TypeI-C,TypeI-U	csa3,cas3,cas5,cas6e,cas2,DEDDh,DinG,WYL,cas8c,cas7,cas4,cas1	NA|69aa|up_6|NZ_AP021884.1_2641666_2641873_+,NA	cas5|233aa|up_9|NZ_AP021884.1_2637986_2638685_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|595aa|up_8|NZ_AP021884.1_2638681_2640466_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|367aa|up_7|NZ_AP021884.1_2640483_2641584_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	NA|69aa|up_6|NZ_AP021884.1_2641666_2641873_+	NA	NA|81aa|up_5|NZ_AP021884.1_2641869_2642112_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	cas4|209aa|up_4|NZ_AP021884.1_2642112_2642739_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	NA|125aa|up_3|NZ_AP021884.1_2642722_2643097_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|106aa|up_2|NZ_AP021884.1_2643084_2643402_-	COG0864, NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain [Transcription]	cas1|345aa|up_1|NZ_AP021884.1_2643449_2644484_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_AP021884.1_2644492_2644783_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|119aa|down_0|NZ_AP021884.1_2647299_2647656_-	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|492aa|down_1|NZ_AP021884.1_2647849_2649325_-	PRK10735, tldD, protease TldD; Provisional	NA|314aa|down_2|NZ_AP021884.1_2649382_2650324_-	cd07572, nit, Nit1, Nit 2, and related proteins, and the Nit1-like domain of NitFhit (class 10 nitrilases)	NA|1268aa|down_3|NZ_AP021884.1_2650366_2654170_-	TIGR02099, probable_transmembrane_protein, TIGR02099 family protein	NA|657aa|down_4|NZ_AP021884.1_2654382_2656353_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|892aa|down_5|NZ_AP021884.1_2656415_2659091_+	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|305aa|down_6|NZ_AP021884.1_2659154_2660069_+	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|69aa|down_7|NZ_AP021884.1_2660079_2660286_+	COG4391, COG4391, Uncharacterized protein conserved in bacteria [Function unknown]	NA|149aa|down_8|NZ_AP021884.1_2660694_2661141_+	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|156aa|down_9|NZ_AP021884.1_2661191_2661659_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea
GCF_009938015.1_ASM993801v1	NZ_AP021884	Sulfuriferula plumbiphila strain Gro7	4	2907296-2907401	4	CRISPRCasFinder	no	csa3	csa3,cas3,cas5,cas6e,cas2,DEDDh,DinG,WYL,cas8c,cas7,cas4,cas1	Type I-A	GATTCCAACGACTGGGTGCGGCTGGGCAGTATGG	34	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas5,cas6e,cas2,DEDDh,DinG,WYL,cas8c,cas7,cas4,cas1	NA,NA|500aa|down_1|NZ_AP021884.1_2908463_2909963_-,NA|143aa|down_2|NZ_AP021884.1_2909981_2910410_-,NA|512aa|down_9|NZ_AP021884.1_2919448_2920984_+	NA|215aa|up_9|NZ_AP021884.1_2893538_2894183_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|740aa|up_8|NZ_AP021884.1_2894604_2896824_+	PRK09776, PRK09776, putative diguanylate cyclase; Provisional	NA|159aa|up_7|NZ_AP021884.1_2896848_2897325_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|474aa|up_6|NZ_AP021884.1_2897364_2898786_+	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only]	NA|123aa|up_5|NZ_AP021884.1_2898997_2899366_+	TIGR04485, monoheme_cytochrome_c_SoxX, sulfur oxidation c-type cytochrome SoxX	NA|156aa|up_4|NZ_AP021884.1_2899397_2899865_+	TIGR04488, sulfur_oxidation_protein_SoxY, thiosulfate oxidation carrier protein SoxY	NA|105aa|up_3|NZ_AP021884.1_2899922_2900237_+	TIGR04490, sulfur_oxidation_protein_SoxZ, thiosulfate oxidation carrier complex protein SoxZ	NA|293aa|up_2|NZ_AP021884.1_2900312_2901191_+	TIGR04484, sulfur_oxidation_protein_SoxA, sulfur oxidation c-type cytochrome SoxA	NA|574aa|up_1|NZ_AP021884.1_2901373_2903095_+	TIGR04486, Sulfur_oxidation_protein_SoxB, thiosulfohydrolase SoxB	NA|870aa|up_0|NZ_AP021884.1_2903228_2905838_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|223aa|down_0|NZ_AP021884.1_2907798_2908467_-	pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase	NA|500aa|down_1|NZ_AP021884.1_2908463_2909963_-	NA	NA|143aa|down_2|NZ_AP021884.1_2909981_2910410_-	NA	NA|527aa|down_3|NZ_AP021884.1_2910437_2912018_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|450aa|down_4|NZ_AP021884.1_2912147_2913497_+	TIGR03015, pepcterm_ATPase, putative secretion ATPase, PEP-CTERM locus subfamily	NA|592aa|down_5|NZ_AP021884.1_2913576_2915352_+	TIGR02519, related_to_type_II_protein_secretion_protein, pilus (MSHA type) biogenesis protein MshL	NA|392aa|down_6|NZ_AP021884.1_2915348_2916524_+	sd00006, TPR, Tetratricopeptide repeat	NA|568aa|down_7|NZ_AP021884.1_2916529_2918233_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|402aa|down_8|NZ_AP021884.1_2918246_2919452_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|512aa|down_9|NZ_AP021884.1_2919448_2920984_+	NA
