assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009936235.1_ASM993623v1	NZ_AP022314	Mycobacterium xenopi strain JCM 15661	1	2002678-2002775	1	CRISPRCasFinder	no		csa3,DEDDh,RT,cas3,c2c9_V-U4,casR,DinG,cas4,WYL	Orphan	TCCGCCGACGCGCAGCGAACCAC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,RT,cas3,c2c9_V-U4,casR,DinG,cas4,WYL	NA|46aa|up_8|NZ_AP022314.1_1995860_1995998_+,NA|84aa|up_7|NZ_AP022314.1_1996082_1996334_+,NA|153aa|up_5|NZ_AP022314.1_1997018_1997477_+,NA|80aa|up_4|NZ_AP022314.1_1997476_1997716_+,NA|92aa|down_1|NZ_AP022314.1_2004498_2004774_+,NA|193aa|down_2|NZ_AP022314.1_2004766_2005345_+,NA|114aa|down_3|NZ_AP022314.1_2005341_2005683_+,NA|145aa|down_5|NZ_AP022314.1_2006053_2006488_+,NA|173aa|down_6|NZ_AP022314.1_2007768_2008287_+,NA|124aa|down_7|NZ_AP022314.1_2008258_2008630_+,NA|64aa|down_9|NZ_AP022314.1_2014533_2014725_+	NA|99aa|up_9|NZ_AP022314.1_1994726_1995023_+	pfam01381, HTH_3, Helix-turn-helix	NA|46aa|up_8|NZ_AP022314.1_1995860_1995998_+	NA	NA|84aa|up_7|NZ_AP022314.1_1996082_1996334_+	NA	NA|118aa|up_6|NZ_AP022314.1_1996352_1996706_+	pfam08965, DUF1870, Domain of unknown function (DUF1870)	NA|153aa|up_5|NZ_AP022314.1_1997018_1997477_+	NA	NA|80aa|up_4|NZ_AP022314.1_1997476_1997716_+	NA	NA|67aa|up_3|NZ_AP022314.1_1997841_1998042_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|134aa|up_2|NZ_AP022314.1_1998283_1998685_+	COG3747, COG3747, Phage terminase, small subunit [DNA replication, recombination, and repair]	NA|582aa|up_1|NZ_AP022314.1_1998638_2000384_+	COG4626, COG4626, Phage terminase-like protein, large subunit [General function prediction only]	NA|463aa|up_0|NZ_AP022314.1_2000554_2001943_+	pfam04860, Phage_portal, Phage portal protein	NA|478aa|down_0|NZ_AP022314.1_2002985_2004419_+	TIGR01554, prophage_Lp3_protein_18, phage major capsid protein, HK97 family	NA|92aa|down_1|NZ_AP022314.1_2004498_2004774_+	NA	NA|193aa|down_2|NZ_AP022314.1_2004766_2005345_+	NA	NA|114aa|down_3|NZ_AP022314.1_2005341_2005683_+	NA	NA|124aa|down_4|NZ_AP022314.1_2005685_2006057_+	pfam04883, HK97-gp10_like, Bacteriophage HK97-gp10, putative tail-component	NA|145aa|down_5|NZ_AP022314.1_2006053_2006488_+	NA	NA|173aa|down_6|NZ_AP022314.1_2007768_2008287_+	NA	NA|124aa|down_7|NZ_AP022314.1_2008258_2008630_+	NA	NA|1962aa|down_8|NZ_AP022314.1_2008648_2014534_+	TIGR01760, COG5283:_Phage-related_tail_protein, phage tail tape measure protein, TP901 family, core region	NA|64aa|down_9|NZ_AP022314.1_2014533_2014725_+	NA
GCF_009936235.1_ASM993623v1	NZ_AP022314	Mycobacterium xenopi strain JCM 15661	2	3270151-3270231	2	CRISPRCasFinder	no		csa3,DEDDh,RT,cas3,c2c9_V-U4,casR,DinG,cas4,WYL	Orphan	AGCCCGGTGACGATGCGGGTCGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,RT,cas3,c2c9_V-U4,casR,DinG,cas4,WYL	NA|155aa|up_1|NZ_AP022314.1_3268940_3269405_-,NA|69aa|down_1|NZ_AP022314.1_3271710_3271917_-,NA|245aa|down_2|NZ_AP022314.1_3271950_3272685_-,NA|103aa|down_4|NZ_AP022314.1_3274439_3274748_-	NA|327aa|up_9|NZ_AP022314.1_3259322_3260303_-	cd19078, AKR_AKR13C1_2, AKR13C family of aldo-keto reductase (AKR)	NA|370aa|up_8|NZ_AP022314.1_3260305_3261415_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|397aa|up_7|NZ_AP022314.1_3261411_3262602_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|343aa|up_6|NZ_AP022314.1_3262614_3263643_-	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins	NA|259aa|up_5|NZ_AP022314.1_3263635_3264412_-	PRK07231, FabG-like, SDR family oxidoreductase	NA|274aa|up_4|NZ_AP022314.1_3264460_3265282_-	cd05233, SDR_c, classical (c) SDRs	NA|1062aa|up_3|NZ_AP022314.1_3265295_3268481_-	PRK12999, PRK12999, pyruvate carboxylase; Reviewed	NA|152aa|up_2|NZ_AP022314.1_3268488_3268944_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|155aa|up_1|NZ_AP022314.1_3268940_3269405_-	NA	NA|246aa|up_0|NZ_AP022314.1_3269401_3270139_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|457aa|down_0|NZ_AP022314.1_3270322_3271693_+	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|69aa|down_1|NZ_AP022314.1_3271710_3271917_-	NA	NA|245aa|down_2|NZ_AP022314.1_3271950_3272685_-	NA	NA|188aa|down_3|NZ_AP022314.1_3272684_3273248_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|103aa|down_4|NZ_AP022314.1_3274439_3274748_-	NA	NA|172aa|down_5|NZ_AP022314.1_3275443_3275959_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|372aa|down_6|NZ_AP022314.1_3276062_3277178_+	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|339aa|down_7|NZ_AP022314.1_3277189_3278206_-	pfam03060, NMO, Nitronate monooxygenase	NA|449aa|down_8|NZ_AP022314.1_3278210_3279557_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|756aa|down_9|NZ_AP022314.1_3279534_3281802_-	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
GCF_009936235.1_ASM993623v1	NZ_AP022314	Mycobacterium xenopi strain JCM 15661	3	4466613-4466695	3	CRISPRCasFinder	no	csa3	csa3,DEDDh,RT,cas3,c2c9_V-U4,casR,DinG,cas4,WYL	Type I-A	CGCGCTCTGCATCGTCGCCGACCGT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,RT,cas3,c2c9_V-U4,casR,DinG,cas4,WYL	NA|303aa|up_3|NZ_AP022314.1_4462386_4463295_+,NA|293aa|down_1|NZ_AP022314.1_4468444_4469323_-	NA|272aa|up_9|NZ_AP022314.1_4455696_4456512_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|212aa|up_8|NZ_AP022314.1_4456513_4457149_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|433aa|up_7|NZ_AP022314.1_4457145_4458444_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|260aa|up_6|NZ_AP022314.1_4459147_4459927_+	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|296aa|up_5|NZ_AP022314.1_4459968_4460856_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|139aa|up_4|NZ_AP022314.1_4461810_4462227_-	pfam11349, DUF3151, Protein of unknown function (DUF3151)	NA|303aa|up_3|NZ_AP022314.1_4462386_4463295_+	NA	NA|345aa|up_2|NZ_AP022314.1_4463368_4464403_-	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|226aa|up_1|NZ_AP022314.1_4464522_4465200_+	PRK10847, PRK10847, DedA family protein	NA|450aa|up_0|NZ_AP022314.1_4465201_4466551_-	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit	NA|184aa|down_0|NZ_AP022314.1_4467803_4468355_-	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|293aa|down_1|NZ_AP022314.1_4468444_4469323_-	NA	NA|183aa|down_2|NZ_AP022314.1_4469355_4469904_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|259aa|down_3|NZ_AP022314.1_4469890_4470667_-	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|274aa|down_4|NZ_AP022314.1_4470710_4471532_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|849aa|down_5|NZ_AP022314.1_4471679_4474226_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|149aa|down_6|NZ_AP022314.1_4474385_4474832_-	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins	csa3|113aa|down_7|NZ_AP022314.1_4474828_4475167_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|389aa|down_8|NZ_AP022314.1_4475976_4477143_+	cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant	NA|296aa|down_9|NZ_AP022314.1_4477175_4478063_+	cd01081, Aldose_epim, aldose 1-epimerase superfamily
