assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009931195.1_ASM993119v1	NZ_CP034236	Pectobacterium carotovorum subsp. carotovorum strain BP201601.1 chromosome, complete genome	1	811934-812500	1,1	CRISPRCasFinder,CRT	no		DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	Orphan	TTTCTAAGCTGCCTACACGGCAGTGAAC,TTTCTAAGCTGCCTANACGGCAGTGAAC	28,28	0	0	NA	NA	I-F:I-F	9,9	9	Orphan	DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	NA|204aa|up_3|NZ_CP034236.1_807058_807670_+,NA|287aa|down_0|NZ_CP034236.1_812805_813666_+	NA|369aa|up_9|NZ_CP034236.1_800965_802072_+	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]	NA|364aa|up_8|NZ_CP034236.1_802074_803166_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|333aa|up_7|NZ_CP034236.1_803189_804188_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|351aa|up_6|NZ_CP034236.1_804196_805249_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|346aa|up_5|NZ_CP034236.1_805248_806286_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|152aa|up_4|NZ_CP034236.1_806352_806808_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|204aa|up_3|NZ_CP034236.1_807058_807670_+	NA	NA|182aa|up_2|NZ_CP034236.1_807828_808374_-	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|945aa|up_1|NZ_CP034236.1_808624_811459_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|140aa|up_0|NZ_CP034236.1_811474_811894_+	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|287aa|down_0|NZ_CP034236.1_812805_813666_+	NA	NA|135aa|down_1|NZ_CP034236.1_813658_814063_+	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|141aa|down_2|NZ_CP034236.1_814092_814515_+	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|134aa|down_3|NZ_CP034236.1_814561_814963_+	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|135aa|down_4|NZ_CP034236.1_815008_815413_+	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|160aa|down_5|NZ_CP034236.1_815465_815945_-	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|168aa|down_6|NZ_CP034236.1_816063_816567_-	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|398aa|down_7|NZ_CP034236.1_816735_817929_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|205aa|down_8|NZ_CP034236.1_817992_818607_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|160aa|down_9|NZ_CP034236.1_818856_819336_-	COG1522, Lrp, Transcriptional regulators [Transcription]
GCF_009931195.1_ASM993119v1	NZ_CP034236	Pectobacterium carotovorum subsp. carotovorum strain BP201601.1 chromosome, complete genome	2	2134554-2134655	2	CRISPRCasFinder	no		DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	Orphan	GACGTTATAAAATGCCTTTGGCATTTTATT	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	NA,NA|90aa|down_1|NZ_CP034236.1_2136383_2136653_-,NA|51aa|down_2|NZ_CP034236.1_2137204_2137357_+	NA|172aa|up_9|NZ_CP034236.1_2121578_2122094_-	pfam02794, HlyC, RTX toxin acyltransferase family	NA|581aa|up_8|NZ_CP034236.1_2122105_2123848_-	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|466aa|up_7|NZ_CP034236.1_2124189_2125587_+	COG3106, COG3106, Predicted ATPase [General function prediction only]	NA|348aa|up_6|NZ_CP034236.1_2125583_2126627_+	PRK05415, PRK05415, hypothetical protein; Provisional	NA|515aa|up_5|NZ_CP034236.1_2126786_2128331_+	cd05678, M20_dipept_like, uncharacterized M20 dipeptidase	NA|523aa|up_4|NZ_CP034236.1_2128467_2130036_+	PRK10820, PRK10820, transcriptional regulator TyrR	NA|168aa|up_3|NZ_CP034236.1_2130087_2130591_-	PRK00522, tpx, thiol peroxidase	NA|240aa|up_2|NZ_CP034236.1_2130670_2131390_-	PRK10602, PRK10602, murein tripeptide amidase MpaA	NA|539aa|up_1|NZ_CP034236.1_2131554_2133171_+	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|328aa|up_0|NZ_CP034236.1_2133295_2134279_+	PRK09546, zntB, zinc transporter ZntB	NA|312aa|down_0|NZ_CP034236.1_2135071_2136007_-	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|90aa|down_1|NZ_CP034236.1_2136383_2136653_-	NA	NA|51aa|down_2|NZ_CP034236.1_2137204_2137357_+	NA	NA|319aa|down_3|NZ_CP034236.1_2137392_2138349_+	cd16902, pesticin_lyz, lysozyme-like C-terminal domain of pesticin	NA|97aa|down_4|NZ_CP034236.1_2138597_2138888_+	pfam03891, DUF333, Domain of unknown function (DUF333)	NA|331aa|down_5|NZ_CP034236.1_2138920_2139913_-	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains	NA|518aa|down_6|NZ_CP034236.1_2141946_2143500_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|864aa|down_7|NZ_CP034236.1_2143872_2146464_+	PRK10695, PRK10695, YdbH family protein	NA|78aa|down_8|NZ_CP034236.1_2146479_2146713_+	pfam13617, Lipoprotein_19, YnbE-like lipoprotein	NA|202aa|down_9|NZ_CP034236.1_2146756_2147362_-	PRK00170, PRK00170, azoreductase; Reviewed
GCF_009931195.1_ASM993119v1	NZ_CP034236	Pectobacterium carotovorum subsp. carotovorum strain BP201601.1 chromosome, complete genome	3	3276215-3276324	3	CRISPRCasFinder	no		DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	Orphan	CAGCCAGTTGAGCGGACAGGTCTTCG	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	NA|206aa|up_9|NZ_CP034236.1_3269496_3270114_-,NA|51aa|up_7|NZ_CP034236.1_3272064_3272217_-,NA|137aa|up_6|NZ_CP034236.1_3272252_3272663_-,NA|181aa|up_3|NZ_CP034236.1_3274264_3274807_-,NA|136aa|up_2|NZ_CP034236.1_3274796_3275204_-,NA|167aa|up_1|NZ_CP034236.1_3275206_3275707_-,NA|168aa|down_1|NZ_CP034236.1_3277507_3278011_-,NA|73aa|down_5|NZ_CP034236.1_3281607_3281826_+,NA|271aa|down_7|NZ_CP034236.1_3283379_3284192_-	NA|206aa|up_9|NZ_CP034236.1_3269496_3270114_-	NA	NA|654aa|up_8|NZ_CP034236.1_3270113_3272075_-	PHA02564, V, virion protein; Provisional	NA|51aa|up_7|NZ_CP034236.1_3272064_3272217_-	NA	NA|137aa|up_6|NZ_CP034236.1_3272252_3272663_-	NA	NA|147aa|up_5|NZ_CP034236.1_3272663_3273104_-	pfam11681, DUF3277, Protein of unknown function (DUF3277)	NA|383aa|up_4|NZ_CP034236.1_3273113_3274262_-	pfam11863, DUF3383, Protein of unknown function (DUF3383)	NA|181aa|up_3|NZ_CP034236.1_3274264_3274807_-	NA	NA|136aa|up_2|NZ_CP034236.1_3274796_3275204_-	NA	NA|167aa|up_1|NZ_CP034236.1_3275206_3275707_-	NA	NA|137aa|up_0|NZ_CP034236.1_3275703_3276114_-	pfam13262, DUF4054, Protein of unknown function (DUF4054)	NA|316aa|down_0|NZ_CP034236.1_3276550_3277498_-	pfam09950, DUF2184, Uncharacterized protein conserved in bacteria (DUF2184)	NA|168aa|down_1|NZ_CP034236.1_3277507_3278011_-	NA	NA|418aa|down_2|NZ_CP034236.1_3278021_3279275_-	pfam09979, DUF2213, Uncharacterized protein conserved in bacteria (DUF2213)	NA|183aa|down_3|NZ_CP034236.1_3279325_3279874_-	pfam04233, Phage_Mu_F, Phage Mu protein F like protein	NA|490aa|down_4|NZ_CP034236.1_3279935_3281405_-	pfam06381, DUF1073, Protein of unknown function (DUF1073)	NA|73aa|down_5|NZ_CP034236.1_3281607_3281826_+	NA	NA|467aa|down_6|NZ_CP034236.1_3282055_3283456_-	pfam04466, Terminase_3, Phage terminase large subunit	NA|271aa|down_7|NZ_CP034236.1_3283379_3284192_-	NA	NA|107aa|down_8|NZ_CP034236.1_3284333_3284654_-	pfam16518, GrlR, T3SS negative regulator,GrlR	NA|75aa|down_9|NZ_CP034236.1_3284773_3284998_-	cd13696, PBP2_Atu4678_like, The substrate binding domain of putative amino acid transporter; the type 2 periplasmic binding protein fold
GCF_009931195.1_ASM993119v1	NZ_CP034236	Pectobacterium carotovorum subsp. carotovorum strain BP201601.1 chromosome, complete genome	4	3334541-3334683	4	CRISPRCasFinder	no		DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	Orphan	GGGTCAACGCTAACGCGTTGCTGTCTCGCTCCGCTCGGCTCGAACCTGAGCGCAG	55	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	NA,NA	NA|118aa|up_9|NZ_CP034236.1_3321474_3321828_+	PRK09838, PRK09838, periplasmic copper-binding protein; Provisional	NA|420aa|up_8|NZ_CP034236.1_3321840_3323100_+	pfam02321, OEP, Outer membrane efflux protein	NA|501aa|up_7|NZ_CP034236.1_3323096_3324599_+	PRK09783, PRK09783, copper/silver efflux system membrane fusion protein CusB; Provisional	NA|1046aa|up_6|NZ_CP034236.1_3324595_3327733_+	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|251aa|up_5|NZ_CP034236.1_3327870_3328623_+	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA|352aa|up_4|NZ_CP034236.1_3328768_3329824_-	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated	NA|317aa|up_3|NZ_CP034236.1_3330119_3331070_+	PRK03557, PRK03557, CDF family zinc transporter ZitB	NA|354aa|up_2|NZ_CP034236.1_3331839_3332901_-	PRK09375, PRK09375, quinolinate synthase NadA	NA|133aa|up_1|NZ_CP034236.1_3333129_3333528_+	PRK10039, PRK10039, hypothetical protein; Provisional	NA|239aa|up_0|NZ_CP034236.1_3333542_3334259_-	pfam04474, DUF554, Protein of unknown function (DUF554)	NA|259aa|down_0|NZ_CP034236.1_3335135_3335912_-	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional	NA|170aa|down_1|NZ_CP034236.1_3335921_3336431_-	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal	NA|431aa|down_2|NZ_CP034236.1_3336471_3337764_-	PRK03629, tolB, Tol-Pal system protein TolB	NA|392aa|down_3|NZ_CP034236.1_3337901_3339077_-	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|142aa|down_4|NZ_CP034236.1_3339141_3339567_-	PRK11024, PRK11024, colicin uptake protein TolR; Provisional	NA|229aa|down_5|NZ_CP034236.1_3339579_3340266_-	PRK10801, PRK10801, Tol-Pal system protein TolQ	NA|135aa|down_6|NZ_CP034236.1_3340262_3340667_-	PRK10800, PRK10800, acyl-CoA thioesterase YbgC; Provisional	NA|98aa|down_7|NZ_CP034236.1_3340800_3341094_-	PRK10588, PRK10588, hypothetical protein; Provisional	NA|39aa|down_8|NZ_CP034236.1_3341090_3341207_-	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|380aa|down_9|NZ_CP034236.1_3341223_3342363_-	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II
GCF_009931195.1_ASM993119v1	NZ_CP034236	Pectobacterium carotovorum subsp. carotovorum strain BP201601.1 chromosome, complete genome	5	4349664-4350791	2,5,1	CRT,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas6e,cas7,cse2gr11,cas8e,cas3	DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	Type I-E	NNCGGTTTATCCCCGCTAGCGCGGGGAACAC,CGGTTTATCCCCGCTAGCGCGGGGAACAC,CGGTTTATCCCCGCTAGCGCGGGGAACAC	31,29,29	0	0	NA	NA	I-E:I-E:I-E	18,17,15	18	TypeI-E	DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	NA|153aa|up_0|NZ_CP034236.1_4349082_4349541_-,NA|170aa|down_1|NZ_CP034236.1_4351459_4351969_+	NA|155aa|up_9|NZ_CP034236.1_4340461_4340926_+	PRK00893, PRK00893, aspartate carbamoyltransferase regulatory subunit; Reviewed	NA|129aa|up_8|NZ_CP034236.1_4341024_4341411_+	PRK11401, PRK11401, enamine/imine deaminase	NA|713aa|up_7|NZ_CP034236.1_4341811_4343950_+	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|155aa|up_6|NZ_CP034236.1_4344030_4344495_+	PRK11121, nrdG, anaerobic ribonucleoside-triphosphate reductase-activating protein	NA|218aa|up_5|NZ_CP034236.1_4344506_4345160_-	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|156aa|up_4|NZ_CP034236.1_4345248_4345716_-	PRK03467, PRK03467, hypothetical protein; Provisional	NA|149aa|up_3|NZ_CP034236.1_4345725_4346172_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|419aa|up_2|NZ_CP034236.1_4346324_4347581_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|451aa|up_1|NZ_CP034236.1_4347632_4348985_+	COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]	NA|153aa|up_0|NZ_CP034236.1_4349082_4349541_-	NA	cas2|97aa|down_0|NZ_CP034236.1_4350875_4351166_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|170aa|down_1|NZ_CP034236.1_4351459_4351969_+	NA	NA|139aa|down_2|NZ_CP034236.1_4352180_4352597_-	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|87aa|down_3|NZ_CP034236.1_4352833_4353094_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|124aa|down_4|NZ_CP034236.1_4353167_4353539_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	cas2|98aa|down_5|NZ_CP034236.1_4354217_4354511_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_6|NZ_CP034236.1_4354511_4355429_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|down_7|NZ_CP034236.1_4355456_4356104_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas7|356aa|down_8|NZ_CP034236.1_4356846_4357914_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|216aa|down_9|NZ_CP034236.1_4357917_4358565_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2
GCF_009931195.1_ASM993119v1	NZ_CP034236	Pectobacterium carotovorum subsp. carotovorum strain BP201601.1 chromosome, complete genome	6	4353556-4354133	6,3,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas7,cse2gr11,cas8e,cas3	DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,9	9	TypeI-E	DEDDh,WYL,csa3,cas3,DinG,cas2,cas1,cas6e,cas7,cse2gr11,cas8e	NA|153aa|up_5|NZ_CP034236.1_4349082_4349541_-,NA|170aa|up_3|NZ_CP034236.1_4351459_4351969_+,NA	NA|156aa|up_9|NZ_CP034236.1_4345248_4345716_-	PRK03467, PRK03467, hypothetical protein; Provisional	NA|149aa|up_8|NZ_CP034236.1_4345725_4346172_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|419aa|up_7|NZ_CP034236.1_4346324_4347581_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|451aa|up_6|NZ_CP034236.1_4347632_4348985_+	COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]	NA|153aa|up_5|NZ_CP034236.1_4349082_4349541_-	NA	cas2|97aa|up_4|NZ_CP034236.1_4350875_4351166_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|170aa|up_3|NZ_CP034236.1_4351459_4351969_+	NA	NA|139aa|up_2|NZ_CP034236.1_4352180_4352597_-	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|87aa|up_1|NZ_CP034236.1_4352833_4353094_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|124aa|up_0|NZ_CP034236.1_4353167_4353539_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	cas2|98aa|down_0|NZ_CP034236.1_4354217_4354511_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|NZ_CP034236.1_4354511_4355429_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|down_2|NZ_CP034236.1_4355456_4356104_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas7|356aa|down_3|NZ_CP034236.1_4356846_4357914_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|216aa|down_4|NZ_CP034236.1_4357917_4358565_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|523aa|down_5|NZ_CP034236.1_4358548_4360117_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	NA|74aa|down_6|NZ_CP034236.1_4360673_4360895_-	COG4226, HicB, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	cas3|906aa|down_7|NZ_CP034236.1_4360947_4363665_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|184aa|down_8|NZ_CP034236.1_4363696_4364248_-	pfam04519, Bactofilin, Polymer-forming cytoskeletal	NA|308aa|down_9|NZ_CP034236.1_4364720_4365644_+	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional
