assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009914255.1_ASM991425v1	NZ_CP040391	Klebsiella pneumoniae strain LSH-KPN25 chromosome, complete genome	1	49908-50039	1	CRISPRCasFinder	no		cas3,csa3,RT,DEDDh,DinG,WYL	Orphan	GCCTGACCGCCCGGCGGCGCTGCGCTTGCCGGGCCT	36	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,DEDDh,DinG,WYL	NA,NA	NA|151aa|up_9|NZ_CP040391.1_40369_40822_+	pfam06711, DUF1198, Protein of unknown function (DUF1198)	NA|108aa|up_8|NZ_CP040391.1_40951_41275_-	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|120aa|up_7|NZ_CP040391.1_41258_41618_-	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system	NA|398aa|up_6|NZ_CP040391.1_41828_43022_+	PRK10213, nepI, purine ribonucleoside efflux pump NepI	NA|270aa|up_5|NZ_CP040391.1_43018_43828_-	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional	NA|368aa|up_4|NZ_CP040391.1_43837_44941_-	PRK13479, PRK13479, 2-aminoethylphosphonate--pyruvate transaminase; Provisional	NA|240aa|up_3|NZ_CP040391.1_45082_45802_+	TIGR03337, phnR, phosphonate utilization transcriptional regulator PhnR	NA|338aa|up_2|NZ_CP040391.1_45980_46994_+	PRK15046, PRK15046, 2-aminoethylphosphonate ABC transporter substrate-binding protein; Provisional	NA|371aa|up_1|NZ_CP040391.1_46999_48112_+	TIGR03258, PhnT, 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT	NA|287aa|up_0|NZ_CP040391.1_48111_48972_+	TIGR03226, PhnU, 2-aminoethylphosphonate ABC transporter, permease protein	NA|460aa|down_0|NZ_CP040391.1_50126_51506_-	pfam02264, LamB, LamB porin	NA|101aa|down_1|NZ_CP040391.1_51650_51953_-	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|441aa|down_2|NZ_CP040391.1_52050_53373_-	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|105aa|down_3|NZ_CP040391.1_53384_53699_-	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|314aa|down_4|NZ_CP040391.1_53992_54934_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|457aa|down_5|NZ_CP040391.1_55145_56516_+	TIGR00895, transport_protein, benzoate transport	NA|421aa|down_6|NZ_CP040391.1_56529_57792_+	PRK13367, PRK13367, gallate dioxygenase	NA|409aa|down_7|NZ_CP040391.1_57788_59015_-	cd08435, PBP2_GbpR, The C-terminal substrate binding domain of galactose-binding protein regulator contains the type 2 periplasmic binding fold	NA|247aa|down_8|NZ_CP040391.1_59142_59883_+	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown]	NA|238aa|down_9|NZ_CP040391.1_59879_60593_+	PRK09262, PRK09262, hypothetical protein; Provisional
GCF_009914255.1_ASM991425v1	NZ_CP040391	Klebsiella pneumoniae strain LSH-KPN25 chromosome, complete genome	2	1796655-1796810	2	CRISPRCasFinder	no		cas3,csa3,RT,DEDDh,DinG,WYL	Orphan	ATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCA	55	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,DEDDh,DinG,WYL	NA|47aa|up_7|NZ_CP040391.1_1787554_1787695_-,NA	NA|425aa|up_9|NZ_CP040391.1_1785279_1786554_+	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]	NA|204aa|up_8|NZ_CP040391.1_1786827_1787439_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|47aa|up_7|NZ_CP040391.1_1787554_1787695_-	NA	NA|234aa|up_6|NZ_CP040391.1_1787932_1788634_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|619aa|up_5|NZ_CP040391.1_1788648_1790505_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|451aa|up_4|NZ_CP040391.1_1790794_1792147_-	PRK11678, PRK11678, putative chaperone; Provisional	NA|283aa|up_3|NZ_CP040391.1_1792284_1793133_+	PRK10308, PRK10308, 3-methyl-adenine DNA glycosylase II; Provisional	NA|214aa|up_2|NZ_CP040391.1_1793247_1793889_+	PRK05480, PRK05480, uridine/cytidine kinase; Provisional	NA|194aa|up_1|NZ_CP040391.1_1793979_1794561_+	TIGR02274, Probable_deoxycytidine_triphosphate_deaminase, deoxycytidine triphosphate deaminase	NA|616aa|up_0|NZ_CP040391.1_1794591_1796439_+	PRK10833, PRK10833, putative assembly protein; Provisional	NA|528aa|down_0|NZ_CP040391.1_1796876_1798460_-	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]	NA|297aa|down_1|NZ_CP040391.1_1799225_1800116_+	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF	NA|210aa|down_2|NZ_CP040391.1_1800508_1801138_+	smart00014, acidPPc, Acid phosphatase homologues	NA|478aa|down_3|NZ_CP040391.1_1802097_1803531_+	pfam14052, Caps_assemb_Wzi, Capsule assembly protein Wzi	NA|380aa|down_4|NZ_CP040391.1_1803676_1804816_+	PRK15078, PRK15078, polysaccharide export protein Wza; Provisional	NA|149aa|down_5|NZ_CP040391.1_1804803_1805250_+	PRK11391, etp, phosphotyrosine-protein phosphatase; Provisional	NA|720aa|down_6|NZ_CP040391.1_1805266_1807426_+	PRK11519, PRK11519, tyrosine-protein kinase Wzc	NA|476aa|down_7|NZ_CP040391.1_1807670_1809098_+	PRK15204, PRK15204, undecaprenyl-phosphate galactose phosphotransferase; Provisional	NA|304aa|down_8|NZ_CP040391.1_1809164_1810076_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|323aa|down_9|NZ_CP040391.1_1810242_1811211_+	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function
GCF_009914255.1_ASM991425v1	NZ_CP040391	Klebsiella pneumoniae strain LSH-KPN25 chromosome, complete genome	3	4569130-4569224	3	CRISPRCasFinder	no		cas3,csa3,RT,DEDDh,DinG,WYL	Orphan	ACTATGGTTTTTATGGTTTTTATT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,DEDDh,DinG,WYL	NA,NA	NA|256aa|up_9|NZ_CP040391.1_4554449_4555217_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|282aa|up_8|NZ_CP040391.1_4555345_4556191_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|570aa|up_7|NZ_CP040391.1_4556528_4558238_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_6|NZ_CP040391.1_4558248_4559751_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|up_5|NZ_CP040391.1_4559888_4560584_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|786aa|up_4|NZ_CP040391.1_4560759_4563117_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|up_3|NZ_CP040391.1_4563304_4566211_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|up_2|NZ_CP040391.1_4566223_4566883_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|180aa|up_1|NZ_CP040391.1_4566957_4567497_-	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|455aa|up_0|NZ_CP040391.1_4567676_4569041_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|542aa|down_0|NZ_CP040391.1_4569365_4570991_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|233aa|down_1|NZ_CP040391.1_4570980_4571679_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|276aa|down_2|NZ_CP040391.1_4571711_4572539_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_3|NZ_CP040391.1_4572782_4575131_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_4|NZ_CP040391.1_4575185_4576472_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_5|NZ_CP040391.1_4576477_4577467_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_6|NZ_CP040391.1_4577463_4578285_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_7|NZ_CP040391.1_4578287_4578665_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|283aa|down_8|NZ_CP040391.1_4578669_4579518_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|down_9|NZ_CP040391.1_4579773_4580253_-	PRK10769, folA, type 3 dihydrofolate reductase
