assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009914055.1_ASM991405v1	NZ_CP028271	Mixta intestinalis strain SRCM103226 chromosome, complete genome	1	64263-64538	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,WYL,RT	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCGNNT	29,29,32	0	0	NA	NA	I-E:I-E:I-E	3,4,4	4	TypeI-E	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,WYL,RT	NA,NA	NA|302aa|up_9|NZ_CP028271.1_49377_50283_-	PRK09016, PRK09016, carboxylating nicotinate-nucleotide diphosphorylase	NA|192aa|up_8|NZ_CP028271.1_50615_51191_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|285aa|up_7|NZ_CP028271.1_51187_52042_+	pfam17113, AmpE, Regulatory signalling modulator protein AmpE	NA|328aa|up_6|NZ_CP028271.1_52012_52996_-	COG3940, COG3940, Predicted beta-xylosidase [General function prediction only]	NA|472aa|up_5|NZ_CP028271.1_52992_54408_-	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]	NA|452aa|up_4|NZ_CP028271.1_54571_55927_-	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|255aa|up_3|NZ_CP028271.1_56472_57237_+	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|888aa|up_2|NZ_CP028271.1_57480_60144_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|635aa|up_1|NZ_CP028271.1_60157_62062_+	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|475aa|up_0|NZ_CP028271.1_62282_63707_+	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|510aa|down_0|NZ_CP028271.1_66037_67567_-	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|562aa|down_1|NZ_CP028271.1_67568_69254_-	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|246aa|down_2|NZ_CP028271.1_69543_70281_-	PRK14999, PRK14999, histidine utilization repressor; Provisional	NA|318aa|down_3|NZ_CP028271.1_70350_71304_-	PRK01722, PRK01722, formimidoylglutamase; Provisional	NA|410aa|down_4|NZ_CP028271.1_71300_72530_-	PRK09356, PRK09356, imidazolonepropionase; Validated	cas3|904aa|down_5|NZ_CP028271.1_73963_76675_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|524aa|down_6|NZ_CP028271.1_77598_79170_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|197aa|down_7|NZ_CP028271.1_79162_79753_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|355aa|down_8|NZ_CP028271.1_79775_80840_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|242aa|down_9|NZ_CP028271.1_80849_81575_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5
GCF_009914055.1_ASM991405v1	NZ_CP028271	Mixta intestinalis strain SRCM103226 chromosome, complete genome	2	72892-73958	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,WYL,RT	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	16,17,17	17	TypeI-E	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,WYL,RT	NA,NA|209aa|down_9|NZ_CP028271.1_84817_85444_-	NA|452aa|up_9|NZ_CP028271.1_54571_55927_-	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|255aa|up_8|NZ_CP028271.1_56472_57237_+	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|888aa|up_7|NZ_CP028271.1_57480_60144_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|635aa|up_6|NZ_CP028271.1_60157_62062_+	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|475aa|up_5|NZ_CP028271.1_62282_63707_+	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|510aa|up_4|NZ_CP028271.1_66037_67567_-	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|562aa|up_3|NZ_CP028271.1_67568_69254_-	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|246aa|up_2|NZ_CP028271.1_69543_70281_-	PRK14999, PRK14999, histidine utilization repressor; Provisional	NA|318aa|up_1|NZ_CP028271.1_70350_71304_-	PRK01722, PRK01722, formimidoylglutamase; Provisional	NA|410aa|up_0|NZ_CP028271.1_71300_72530_-	PRK09356, PRK09356, imidazolonepropionase; Validated	cas3|904aa|down_0|NZ_CP028271.1_73963_76675_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|524aa|down_1|NZ_CP028271.1_77598_79170_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|197aa|down_2|NZ_CP028271.1_79162_79753_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|355aa|down_3|NZ_CP028271.1_79775_80840_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|242aa|down_4|NZ_CP028271.1_80849_81575_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|235aa|down_5|NZ_CP028271.1_81574_82279_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas2|98aa|down_6|NZ_CP028271.1_83206_83500_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|85aa|down_7|NZ_CP028271.1_83804_84059_+	pfam03857, Colicin_im, Colicin immunity protein	NA|108aa|down_8|NZ_CP028271.1_84000_84324_+	pfam03857, Colicin_im, Colicin immunity protein	NA|209aa|down_9|NZ_CP028271.1_84817_85444_-	NA
GCF_009914055.1_ASM991405v1	NZ_CP028271	Mixta intestinalis strain SRCM103226 chromosome, complete genome	3	3858911-3860037	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,WYL,RT	Orphan	GTGTTCCCCGCGTGAGCGGGGATAAACCG,GTGTTCCCCGCGTGAGCGGGGATAAACCG,GTGTTCCCCGCGTGAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	18,18,12	18	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,WYL,RT	NA,NA|71aa|down_0|NZ_CP028271.1_3860499_3860712_+,NA|65aa|down_1|NZ_CP028271.1_3860877_3861072_-	NA|260aa|up_9|NZ_CP028271.1_3848070_3848850_+	PRK05701, fliR, flagellar type III secretion system protein FliR	NA|80aa|up_8|NZ_CP028271.1_3848889_3849129_-	COG3792, COG3792, Uncharacterized protein conserved in bacteria [Function unknown]	NA|86aa|up_7|NZ_CP028271.1_3849222_3849480_-	cd16363, Col_Im_like, inhibitory immunity (Im) protein of colicin (Col) deoxyribonuclease (DNase) and pyocins	NA|86aa|up_6|NZ_CP028271.1_3849770_3850028_-	cd16363, Col_Im_like, inhibitory immunity (Im) protein of colicin (Col) deoxyribonuclease (DNase) and pyocins	NA|86aa|up_5|NZ_CP028271.1_3850322_3850580_-	cd16363, Col_Im_like, inhibitory immunity (Im) protein of colicin (Col) deoxyribonuclease (DNase) and pyocins	NA|117aa|up_4|NZ_CP028271.1_3850865_3851216_-	COG3792, COG3792, Uncharacterized protein conserved in bacteria [Function unknown]	NA|392aa|up_3|NZ_CP028271.1_3851482_3852658_-	pfam06958, Pyocin_S, S-type Pyocin	NA|421aa|up_2|NZ_CP028271.1_3853015_3854278_-	PRK09528, lacY, galactoside permease; Reviewed	NA|1032aa|up_1|NZ_CP028271.1_3854346_3857442_-	PRK09525, lacZ, beta-galactosidase	NA|361aa|up_0|NZ_CP028271.1_3857569_3858652_-	PRK09526, lacI, lac repressor; Reviewed	NA|71aa|down_0|NZ_CP028271.1_3860499_3860712_+	NA	NA|65aa|down_1|NZ_CP028271.1_3860877_3861072_-	NA	NA|430aa|down_2|NZ_CP028271.1_3861409_3862699_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|386aa|down_3|NZ_CP028271.1_3862691_3863849_-	cd03316, MR_like, Mandelate racemase (MR)-like subfamily of the enolase superfamily	NA|274aa|down_4|NZ_CP028271.1_3864138_3864960_-	cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, similar to Escherichia coli YphB	NA|480aa|down_5|NZ_CP028271.1_3864959_3866399_-	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily	NA|1092aa|down_6|NZ_CP028271.1_3866471_3869747_-	pfam17128, DUF5107, Domain of unknown function (DUF5107)	NA|399aa|down_7|NZ_CP028271.1_3869862_3871059_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|321aa|down_8|NZ_CP028271.1_3871055_3872018_-	pfam14503, YhfZ_C, YhfZ C-terminal domain	NA|284aa|down_9|NZ_CP028271.1_3872033_3872885_-	COG1830, FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
GCF_009914055.1_ASM991405v1	NZ_CP028272	Mixta intestinalis strain SRCM103226 plasmid unnamed1, complete sequence	1	67545-67761	1	CRISPRCasFinder	no		WYL	Orphan	CCCGCTCCTGATGTTGATGTGTTTCCCACATCTG	34	0	0	NA	NA	NA	2	2	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,WYL,RT	NA|78aa|up_8|NZ_CP028272.1_57389_57623_-,NA|30aa|up_6|NZ_CP028272.1_60452_60542_-,NA|142aa|up_5|NZ_CP028272.1_61209_61635_-,NA|99aa|down_1|NZ_CP028272.1_68691_68988_-,NA|223aa|down_6|NZ_CP028272.1_73558_74227_-,NA|182aa|down_8|NZ_CP028272.1_75330_75876_-,NA|68aa|down_9|NZ_CP028272.1_75872_76076_-	NA|183aa|up_9|NZ_CP028272.1_56378_56927_-	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|78aa|up_8|NZ_CP028272.1_57389_57623_-	NA	NA|79aa|up_7|NZ_CP028272.1_60187_60424_-	pfam06006, DUF905, Bacterial protein of unknown function (DUF905)	NA|30aa|up_6|NZ_CP028272.1_60452_60542_-	NA	NA|142aa|up_5|NZ_CP028272.1_61209_61635_-	NA	NA|118aa|up_4|NZ_CP028272.1_62861_63215_-	pfam10784, Plasmid_stab_B, Plasmid stability protein	NA|319aa|up_3|NZ_CP028272.1_63220_64177_-	pfam06406, StbA, StbA protein	NA|139aa|up_2|NZ_CP028272.1_64459_64876_+	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|423aa|up_1|NZ_CP028272.1_64878_66147_+	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC	NA|285aa|up_0|NZ_CP028272.1_66444_67299_+	pfam01051, Rep_3, Initiator Replication protein	NA|84aa|down_0|NZ_CP028272.1_68304_68556_-	pfam07308, DUF1456, Protein of unknown function (DUF1456)	NA|99aa|down_1|NZ_CP028272.1_68691_68988_-	NA	NA|61aa|down_2|NZ_CP028272.1_69260_69443_+	pfam12651, RHH_3, Ribbon-helix-helix domain	NA|321aa|down_3|NZ_CP028272.1_69950_70913_-	pfam08775, ParB, ParB family	NA|402aa|down_4|NZ_CP028272.1_70909_72115_-	pfam18607, HTH_54, ParA helix turn helix domain	NA|310aa|down_5|NZ_CP028272.1_72387_73317_+	COG5464, COG5464, Uncharacterized conserved protein [Function unknown]	NA|223aa|down_6|NZ_CP028272.1_73558_74227_-	NA	NA|258aa|down_7|NZ_CP028272.1_74282_75056_-	pfam00589, Phage_integrase, Phage integrase family	NA|182aa|down_8|NZ_CP028272.1_75330_75876_-	NA	NA|68aa|down_9|NZ_CP028272.1_75872_76076_-	NA
