assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009913895.1_ASM991389v1	NZ_CP028249	Pediococcus acidilactici strain SRCM102732 chromosome, complete genome	1	836802-836951	1	CRISPRCasFinder	no		cas3,DinG,csa3,cas9,cas2,csn2,DEDDh	Orphan	GAAAACACGTTTCAACTACCTAGCAACAGAACACAGAGGCATTAATCGCGG	51	1	1	836853-836900	NZ_CP028249.1_836557-836604	NA	1	1	Orphan	cas3,DinG,csa3,cas9,cas2,csn2,DEDDh	NA|77aa|up_8|NZ_CP028249.1_828482_828713_+,NA|284aa|up_6|NZ_CP028249.1_829727_830579_-,NA	NA|225aa|up_9|NZ_CP028249.1_827821_828496_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|77aa|up_8|NZ_CP028249.1_828482_828713_+	NA	NA|215aa|up_7|NZ_CP028249.1_828747_829392_-	PRK10847, PRK10847, DedA family protein	NA|284aa|up_6|NZ_CP028249.1_829727_830579_-	NA	NA|140aa|up_5|NZ_CP028249.1_830582_831002_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|311aa|up_4|NZ_CP028249.1_831176_832109_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|659aa|up_3|NZ_CP028249.1_832227_834204_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|319aa|up_2|NZ_CP028249.1_834295_835252_-	cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB)	NA|328aa|up_1|NZ_CP028249.1_835412_836396_+	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|49aa|up_0|NZ_CP028249.1_836480_836627_+	PLN02258, PLN02258, 9-cis-epoxycarotenoid dioxygenase NCED	NA|719aa|down_0|NZ_CP028249.1_837111_839268_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|144aa|down_1|NZ_CP028249.1_839455_839887_+	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|370aa|down_2|NZ_CP028249.1_839886_840996_+	pfam07907, YibE_F, YibE/F-like protein	NA|255aa|down_3|NZ_CP028249.1_840988_841753_+	pfam07907, YibE_F, YibE/F-like protein	NA|313aa|down_4|NZ_CP028249.1_841946_842885_-	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|245aa|down_5|NZ_CP028249.1_842994_843729_+	TIGR03716, R_switched_YkoY, integral membrane protein, YkoY family	NA|110aa|down_6|NZ_CP028249.1_843769_844099_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|287aa|down_7|NZ_CP028249.1_844085_844946_+	TIGR00762, DegV, EDD domain protein, DegV family	NA|261aa|down_8|NZ_CP028249.1_844986_845769_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|125aa|down_9|NZ_CP028249.1_845989_846364_-	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins
GCF_009913895.1_ASM991389v1	NZ_CP028249	Pediococcus acidilactici strain SRCM102732 chromosome, complete genome	2	897586-897687	2	CRISPRCasFinder	no	cas9,cas2,csn2	cas3,DinG,csa3,cas9,cas2,csn2,DEDDh	Type II-A,Type II-B,Type II-C	GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC	36	0	0	NA	NA	NA	1	1	TypeII-A,TypeII-B,TypeII-C	cas3,DinG,csa3,cas9,cas2,csn2,DEDDh	NA,NA|47aa|down_2|NZ_CP028249.1_898524_898665_-	NA|641aa|up_9|NZ_CP028249.1_880485_882408_+	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase	NA|518aa|up_8|NZ_CP028249.1_882480_884034_+	PRK00074, guaA, GMP synthase; Reviewed	NA|215aa|up_7|NZ_CP028249.1_884326_884971_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|470aa|up_6|NZ_CP028249.1_885163_886573_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|845aa|up_5|NZ_CP028249.1_886599_889134_+	cd09601, M1_APN-Q_like, Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1)	NA|192aa|up_4|NZ_CP028249.1_889359_889935_-	PRK08581, PRK08581, amidase domain-containing protein	cas9|1367aa|up_3|NZ_CP028249.1_890118_894219_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|358aa|up_2|NZ_CP028249.1_894854_895928_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	cas2|102aa|up_1|NZ_CP028249.1_896583_896889_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|224aa|up_0|NZ_CP028249.1_896885_897557_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|81aa|down_0|NZ_CP028249.1_897993_898236_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|46aa|down_1|NZ_CP028249.1_898329_898467_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|47aa|down_2|NZ_CP028249.1_898524_898665_-	NA	NA|216aa|down_3|NZ_CP028249.1_899631_900279_-	pfam02517, Abi, CAAX protease self-immunity	NA|95aa|down_4|NZ_CP028249.1_900468_900753_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|541aa|down_5|NZ_CP028249.1_900775_902398_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|611aa|down_6|NZ_CP028249.1_902697_904530_+	pfam13520, AA_permease_2, Amino acid permease	NA|392aa|down_7|NZ_CP028249.1_904751_905927_+	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|213aa|down_8|NZ_CP028249.1_905994_906633_-	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|440aa|down_9|NZ_CP028249.1_906664_907984_+	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]
GCF_009913895.1_ASM991389v1	NZ_CP028249	Pediococcus acidilactici strain SRCM102732 chromosome, complete genome	3	1109613-1109716	3	CRISPRCasFinder	no		cas3,DinG,csa3,cas9,cas2,csn2,DEDDh	Orphan	TTAGCTCAGTTGGGAGAGCATCTG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csa3,cas9,cas2,csn2,DEDDh	NA|85aa|up_9|NZ_CP028249.1_1092896_1093151_+,NA|63aa|up_6|NZ_CP028249.1_1097498_1097687_+,NA|244aa|down_0|NZ_CP028249.1_1111633_1112365_-	NA|85aa|up_9|NZ_CP028249.1_1092896_1093151_+	NA	NA|326aa|up_8|NZ_CP028249.1_1093768_1094746_+	PRK05458, PRK05458, guanosine 5'-monophosphate oxidoreductase; Provisional	NA|736aa|up_7|NZ_CP028249.1_1095075_1097283_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|63aa|up_6|NZ_CP028249.1_1097498_1097687_+	NA	NA|89aa|up_5|NZ_CP028249.1_1097829_1098096_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|575aa|up_4|NZ_CP028249.1_1098095_1099820_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|258aa|up_3|NZ_CP028249.1_1099892_1100666_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|396aa|up_2|NZ_CP028249.1_1100751_1101939_+	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins	NA|339aa|up_1|NZ_CP028249.1_1101969_1102986_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|335aa|up_0|NZ_CP028249.1_1103031_1104036_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|244aa|down_0|NZ_CP028249.1_1111633_1112365_-	NA	NA|397aa|down_1|NZ_CP028249.1_1112536_1113727_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|490aa|down_2|NZ_CP028249.1_1113902_1115372_+	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|188aa|down_3|NZ_CP028249.1_1115451_1116015_-	pfam06962, rRNA_methylase, Putative rRNA methylase	NA|212aa|down_4|NZ_CP028249.1_1116007_1116643_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|806aa|down_5|NZ_CP028249.1_1117048_1119466_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|561aa|down_6|NZ_CP028249.1_1119722_1121405_+	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|240aa|down_7|NZ_CP028249.1_1121415_1122135_+	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like	NA|277aa|down_8|NZ_CP028249.1_1122240_1123071_-	cd01171, YXKO-related, B	NA|154aa|down_9|NZ_CP028249.1_1123196_1123658_+	pfam00582, Usp, Universal stress protein family
