bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	3.1|471713|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	31	0	0	1	31	2796305	2796275	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	7.75e-09	50.7	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	2796275-2796305	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	3.1|471713|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	96.774	31	1	0	1	31	2796250	2796220	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.97e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	2796220-2796250	GGTAATGCAAGTTGGCGGGGCCCCAACACAG	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	428263	428284	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	428263-428284	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	520501	520522	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	520501-520522	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1141211	1141232	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1141211-1141232	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1322781	1322802	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1322781-1322802	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1654528	1654549	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1654528-1654549	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	303777	303756	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	303756-303777	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1052681	1052660	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1052660-1052681	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1337336	1337315	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1337315-1337336	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	2673088	2673067	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2673067-2673088	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	2673146	2673125	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2673125-2673146	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	2796221	2796200	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2796200-2796221	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	2796331	2796310	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2796310-2796331	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.455	22	1	0	1	22	634783	634804	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	634783-634804	CCTGTAGAATTTCTTTTAGAAA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.455	22	1	0	1	22	1357042	1357063	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1357042-1357063	CCTGTAGAATTTCTTTACGAAA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.1|477180|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.455	22	1	0	1	22	1357275	1357296	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1357275-1357296	CCTGTAGAATTTCTTTACGAAA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.2|477238|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	429235	429213	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	429213-429235	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.2|477238|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	429513	429491	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	429491-429513	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.2|477238|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	1052798	1052776	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1052776-1052798	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.2|477238|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	1654586	1654608	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1654586-1654608	TCTGTAGAAATTGGGAATCCAAT	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.2|477238|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	1995329	1995351	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1995329-1995351	TCTGTAGAAATTGGGAATCCAAT	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.2|477238|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	91.304	23	2	0	1	23	1141094	1141116	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1141094-1141116	TCTGTAGAAATTGGGAATACAAT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.2|477238|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	91.304	23	2	0	1	23	1755432	1755454	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1755432-1755454	TCTGTTGAAATTGGGAATCCAAT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	428263	428284	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	428263-428284	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	520501	520522	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	520501-520522	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1141211	1141232	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1141211-1141232	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1322781	1322802	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1322781-1322802	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1654528	1654549	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1654528-1654549	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	303777	303756	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	303756-303777	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1052681	1052660	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1052660-1052681	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	1337336	1337315	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1337315-1337336	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	2673088	2673067	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2673067-2673088	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	2673146	2673125	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2673125-2673146	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	2796221	2796200	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2796200-2796221	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	22	0	0	1	22	2796331	2796310	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.22e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2796310-2796331	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.455	22	1	0	1	22	634783	634804	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	634783-634804	CCTGTAGAATTTCTTTTAGAAA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.455	22	1	0	1	22	1357042	1357063	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1357042-1357063	CCTGTAGAATTTCTTTACGAAA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.3|477297|22|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.455	22	1	0	1	22	1357275	1357296	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1357275-1357296	CCTGTAGAATTTCTTTACGAAA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.4|477355|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	429235	429213	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	429213-429235	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.4|477355|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	429513	429491	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	429491-429513	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.4|477355|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	1052798	1052776	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1052776-1052798	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.4|477355|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	1654586	1654608	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1654586-1654608	TCTGTAGAAATTGGGAATCCAAT	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.4|477355|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	95.652	23	1	0	1	23	1995329	1995351	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.66e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1995329-1995351	TCTGTAGAAATTGGGAATCCAAT	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.4|477355|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	91.304	23	2	0	1	23	1141094	1141116	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1141094-1141116	TCTGTAGAAATTGGGAATACAAT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	4.4|477355|23|NZ_CP047802|CRT	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	91.304	23	2	0	1	23	1755432	1755454	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1755432-1755454	TCTGTTGAAATTGGGAATCCAAT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	5.1|520452|34|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	97.059	34	1	0	1	34	1052789	1052756	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	4.13e-09	52.3	1.0	ATTGAGAATCCAATTTCTCTTTGTTGGGGCCCAT	1052756-1052789	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	6.1|1322731|33|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	96.970	33	1	0	1	33	1052789	1052757	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	1.08e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	1052757-1052789	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	7.2|1357242|22|NZ_CP047802|PILER-CR	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	90.909	22	2	0	1	22	1755320	1755341	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.010	30.1	1.0	TGAAATTGGGGTTCCAATTTCT	1755320-1755341	TGAAATTGGGAATCCAATTTCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	7.2|1357242|22|NZ_CP047802|PILER-CR	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	90.909	22	2	0	1	22	1755437	1755458	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.010	30.1	1.0	TGAAATTGGGGTTCCAATTTCT	1755437-1755458	TGAAATTGGGAATCCAATTTCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	7.2|1357242|22|NZ_CP047802|PILER-CR	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	90.909	22	2	0	1	22	841157	841136	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	0.010	30.1	1.0	TGAAATTGGGGTTCCAATTTCT	841136-841157	AGAAATTGGATCACCAATTTCA	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	9.1|1755375|34|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	34	0	0	1	34	471688	471721	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	4.59e-10	55.5	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	471688-471721	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	9.1|1755375|34|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	100.000	34	0	0	1	34	841047	841014	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	4.59e-10	55.5	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	841014-841047	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	0
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	9.1|1755375|34|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	97.059	34	1	0	1	34	1449473	1449440	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	4.13e-09	52.3	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	1449440-1449473	CCAACACAAAGAATTTCGAAAAGAAATTCTACAA	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	9.1|1755375|34|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	94.118	34	2	0	1	34	1057130	1057163	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.72e-08	49.1	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	1057130-1057163	TTGTGGAATTTCTTATCGAAATTCTCTGTGTTGG	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	9.1|1755375|34|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	94.118	34	2	0	1	34	2444813	2444846	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	3.72e-08	49.1	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	2444813-2444846	TTGTAGAATTTCTTTTCGAAATTCTTTTTGTTGG	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	96.774	31	1	0	1	31	484432	484462	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.97e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	484432-484462	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	96.774	31	1	0	1	31	484488	484518	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.97e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	484488-484518	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	484544	484574	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	484544-484574	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	520765	520795	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	520765-520795	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	730682	730712	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	730682-730712	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	1141147	1141177	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1141147-1141177	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	1141263	1141293	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1141263-1141293	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	1653180	1653210	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1653180-1653210	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	1995382	1995412	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1995382-1995412	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	2170967	2170997	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2170967-2170997	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	2574467	2574497	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2574467-2574497	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	42411	42381	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	42381-42411	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	303841	303811	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	303811-303841	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	846645	846615	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	846615-846645	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	1052745	1052715	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1052715-1052745	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047802	Staphylococcus aureus strain UP_1442 chromosome, complete genome	12.1|2006183|31|NZ_CP047802|CRISPRCasFinder	NZ_CP047802.1	Staphylococcus aureus strain UP_1442 chromosome, complete genome	93.548	31	2	0	1	31	1337399	1337369	81119-81220|429222-429304|471689-471767|477144-477413|520428-520509|1322705-1322789|1357135-1357282|1618962-1619104|1755351-1755432|1884277-1884357|1896598-1896683|2006158-2006238	6.28e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1337369-1337399	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
