bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	1.1|410975|33|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	96.970	33	1	0	1	33	680981	680949	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	1.09e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	680949-680981	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	1.1|410975|33|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	96.970	33	1	0	1	33	1244006	1244038	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	1.09e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	1244006-1244038	TGGGCCCCAACACAGAGAAATTGGATTTCCAAT	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	2.1|1200801|34|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	97.059	34	1	0	1	34	680982	680949	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	4.16e-09	52.3	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCTCAAT	680949-680982	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	3.1|1249542|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	100.000	31	0	0	1	31	1802951	1802921	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	7.80e-09	50.7	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	1802921-1802951	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	0
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	3.1|1249542|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	96.774	31	1	0	1	31	376521	376551	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	7.02e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	376521-376551	GGCAATGGAAGTTGGCGGGGCCCCAACACAG	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	3.1|1249542|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	96.774	31	1	0	1	31	1803006	1802976	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	7.02e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	1802976-1803006	CTGTGTTGGGGCCCCGCCAACTTGCATTACC	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	5.1|2348815|46|NZ_CP047854|PILER-CR	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	95.652	46	2	0	1	46	2345291	2345336	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	1.59e-13	68.2	1.0	ACAAAGATAAACCTAATTATCAATTTGGTGGACACAACAGTGTTGA	2345291-2345336	ACAAAGATAAACCTAATTATCAATTCGGTGGACACAATAGTGTTGA	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	5.2|2348878|37|NZ_CP047854|PILER-CR	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	94.595	37	2	0	1	37	2345354	2345390	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	1.73e-09	53.9	1.0	TTCCAAAAGTAAGTGGTCAAAATGAAGGTCAACAAAC	2345354-2345390	TTCCAAAAGTAAGCGGCCAAAATGAAGGTCAACAAAC	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	6.1|2424368|33|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	96.970	33	1	0	1	33	1200488	1200520	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	1.09e-08	50.7	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1200488-1200520	CAGAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	6.1|2424368|33|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	96.970	33	1	0	1	33	1236707	1236739	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	1.09e-08	50.7	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1236707-1236739	CAGAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	6.1|2424368|33|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.939	33	2	0	1	33	2816284	2816252	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	9.83e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	2816252-2816284	CATTATTGTAAGCTGACTTTCCGCCAGCCTCTG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	6.1|2424368|33|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.939	33	2	0	1	33	1236763	1236795	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	9.83e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1236763-1236795	CAGAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	6.1|2424368|33|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.939	33	2	0	1	33	1236819	1236851	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	9.83e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1236819-1236851	CAGAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	96.774	31	1	0	1	31	1236767	1236797	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	7.02e-08	47.5	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1236767-1236797	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	96.774	31	1	0	1	31	1236823	1236853	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	7.02e-08	47.5	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1236823-1236853	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	396369	396339	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	396339-396369	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	681023	680993	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	680993-681023	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	887124	887094	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	887094-887124	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	1418995	1418965	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1418965-1418995	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	1681088	1681058	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1681058-1681088	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	80559	80589	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	80559-80589	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	592445	592475	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	592445-592475	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	592561	592591	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	592561-592591	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	989551	989581	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	989551-989581	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	1200492	1200522	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1200492-1200522	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	1236711	1236741	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1236711-1236741	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	2024728	2024758	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	2024728-2024758	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047854	Staphylococcus aureus strain UP_1525 chromosome, complete genome	7.1|2589158|31|NZ_CP047854|CRISPRCasFinder	NZ_CP047854.1	Staphylococcus aureus strain UP_1525 chromosome, complete genome	93.548	31	2	0	1	31	2599959	2599989	410949-411033|1200777-1200858|1249518-1249596|1642249-1642351|2348798-2348931|2424345-2424423|2589133-2589213|2698689-2698774|2711014-2711095	6.32e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	2599959-2599989	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
