bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	1.1|413099|33|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	96.970	33	1	0	1	33	681600	681568	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	1.07e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	681568-681600	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	1
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	1.1|413099|33|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	96.970	33	1	0	1	33	1930040	1930008	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	1.07e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	1930008-1930040	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	1
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	1.1|413099|33|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	96.970	33	1	0	1	33	1245540	1245572	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	1.07e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	1245540-1245572	TGGGCCCCAACACAGAGAAATTGGATTTCCAAT	1
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	2.1|1202188|34|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	97.059	34	1	0	1	34	681601	681568	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	4.06e-09	52.3	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCTCAAT	681568-681601	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	3.1|1251076|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	100.000	31	0	0	1	31	1806869	1806839	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	9.13e-09	50.7	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	1806839-1806869	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	0
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	3.1|1251076|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	96.774	31	1	0	1	31	1806924	1806894	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	8.22e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	1806894-1806924	CTGTGTTGGGGCCCCGCCAACTTGCATTACC	1
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	5.1|2304869|46|NZ_CP047800|PILER-CR	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	95.652	46	2	0	1	46	2301219	2301264	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	1.55e-13	68.2	1.0	ACAAAGATAAACCTAATTATCAATTTGGTGGACACAACAGTGTTGA	2301219-2301264	ACAAAGATAAACCTAATTATCAATTCGGTGGACACAATAGTGTTGA	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	5.2|2304932|37|NZ_CP047800|PILER-CR	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	94.595	37	2	0	1	37	2301282	2301318	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	1.69e-09	53.9	1.0	TTCCAAAAGTAAGTGGTCAAAATGAAGGTCAACAAAC	2301282-2301318	TTCCAAAAGTAAGCGGCCAAAATGAAGGTCAACAAAC	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	6.1|2380037|33|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	96.970	33	1	0	1	33	1201875	1201907	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	1.07e-08	50.7	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1201875-1201907	CAGAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	6.1|2380037|33|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.939	33	2	0	1	33	2771914	2771882	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	9.59e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	2771882-2771914	CATTATTGTAAGCTGACTTTCCGCCAGCCTCTG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	6.1|2380037|33|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.939	33	2	0	1	33	1238241	1238273	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	9.59e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1238241-1238273	CAGAAACTGGCGGAAAGTCAGCTTACAATAATG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	6.1|2380037|33|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.939	33	2	0	1	33	1238297	1238329	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	9.59e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1238297-1238329	CAGAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	6.1|2380037|33|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.939	33	2	0	1	33	1238353	1238385	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	9.59e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1238353-1238385	CAGAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	96.774	31	1	0	1	31	1238301	1238331	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	8.22e-08	47.5	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1238301-1238331	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	96.774	31	1	0	1	31	1238357	1238387	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	8.22e-08	47.5	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1238357-1238387	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	398493	398463	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	398463-398493	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	681642	681612	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	681612-681642	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	887727	887697	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	887697-887727	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	1417490	1417460	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1417460-1417490	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	1684984	1684954	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1684954-1684984	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	593063	593093	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	593063-593093	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	593179	593209	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	593179-593209	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	990287	990317	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	990287-990317	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	1201879	1201909	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1201879-1201909	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	2028755	2028785	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	2028755-2028785	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047800	Staphylococcus aureus strain UP_296 chromosome, complete genome	7.1|2544783|31|NZ_CP047800|CRISPRCasFinder	NZ_CP047800.1	Staphylococcus aureus strain UP_296 chromosome, complete genome	93.548	31	2	0	1	31	2555584	2555614	413073-413157|1202164-1202245|1251052-1251130|1646145-1646247|2304852-2304985|2380014-2380092|2544758-2544838|2652796-2652881|2665121-2665202	7.39e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	2555584-2555614	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
