bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	1.1|411006|33|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	96.970	33	1	0	1	33	681007	680975	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	1.07e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	680975-681007	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	1.1|411006|33|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	96.970	33	1	0	1	33	1241140	1241172	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	1.07e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	1241140-1241172	TGGGCCCCAACACAGAGAAATTGGATTTCCAAT	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	2.1|1197935|34|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	97.059	34	1	0	1	34	681008	680975	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	4.06e-09	52.3	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCTCAAT	680975-681008	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	3.1|1246676|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	100.000	31	0	0	1	31	1757992	1757962	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	9.14e-09	50.7	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	1757962-1757992	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	0
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	3.1|1246676|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	96.774	31	1	0	1	31	376552	376582	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	8.23e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	376552-376582	GGCAATGGAAGTTGGCGGGGCCCCAACACAG	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	3.1|1246676|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	96.774	31	1	0	1	31	1758047	1758017	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	8.23e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	1758017-1758047	CTGTGTTGGGGCCCCGCCAACTTGCATTACC	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	5.1|2307724|46|NZ_CP047804|PILER-CR	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	95.652	46	2	0	1	46	2304200	2304245	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	1.55e-13	68.2	1.0	ACAAAGATAAACCTAATTATCAATTTGGTGGACACAACAGTGTTGA	2304200-2304245	ACAAAGATAAACCTAATTATCAATTCGGTGGACACAATAGTGTTGA	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	5.2|2307787|37|NZ_CP047804|PILER-CR	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	94.595	37	2	0	1	37	2304263	2304299	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	1.69e-09	53.9	1.0	TTCCAAAAGTAAGTGGTCAAAATGAAGGTCAACAAAC	2304263-2304299	TTCCAAAAGTAAGCGGCCAAAATGAAGGTCAACAAAC	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	6.1|2383276|33|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	96.970	33	1	0	1	33	1233841	1233873	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	1.07e-08	50.7	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1233841-1233873	CAGAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	6.1|2383276|33|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.939	33	2	0	1	33	2776714	2776682	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	9.60e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	2776682-2776714	CATTATTGTAAGCTGACTTTCCGCCAGCCTCTG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	6.1|2383276|33|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.939	33	2	0	1	33	1233897	1233929	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	9.60e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1233897-1233929	CAGAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	6.1|2383276|33|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.939	33	2	0	1	33	1233953	1233985	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	9.60e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1233953-1233985	CAGAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	96.774	31	1	0	1	31	1233901	1233931	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	8.23e-08	47.5	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1233901-1233931	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	96.774	31	1	0	1	31	1233957	1233987	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	8.23e-08	47.5	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1233957-1233987	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	396400	396370	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	396370-396400	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	681049	681019	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	681019-681049	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	887150	887120	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	887120-887150	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	1414386	1414356	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1414356-1414386	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	1681657	1681627	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1681627-1681657	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	80559	80589	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	80559-80589	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	592477	592507	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	592477-592507	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	592593	592623	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	592593-592623	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	1031773	1031803	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1031773-1031803	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	1233845	1233875	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1233845-1233875	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	1979769	1979799	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1979769-1979799	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	7.1|2548065|31|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	93.548	31	2	0	1	31	2558866	2558896	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	7.41e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	2558866-2558896	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	10.1|2800723|34|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	100.000	34	0	0	1	34	892751	892718	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	4.52e-10	55.5	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	892718-892751	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	0
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	10.1|2800723|34|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	100.000	34	0	0	1	34	1246698	1246731	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	4.52e-10	55.5	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	1246698-1246731	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	0
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	10.1|2800723|34|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	97.059	34	1	0	1	34	284329	284296	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	4.06e-09	52.3	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	284296-284329	TTGTAGAATTTCTTTTCGAAATTCTTTGTGTTGG	1
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	10.1|2800723|34|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	94.118	34	2	0	1	34	676607	676640	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	3.66e-08	49.1	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	676607-676640	CCAACACAGAGAATTTCGATAAGAAATTCCACAA	2
NZ_CP047804	Staphylococcus aureus strain UP_774 chromosome, complete genome	10.1|2800723|34|NZ_CP047804|CRISPRCasFinder	NZ_CP047804.1	Staphylococcus aureus strain UP_774 chromosome, complete genome	94.118	34	2	0	1	34	2109419	2109452	410980-411064|1197911-1197992|1246652-1246730|1642818-1642920|2307707-2307840|2383253-2383331|2548040-2548120|2659117-2659202|2671442-2671523|2800699-2800780	3.66e-08	49.1	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	2109419-2109452	CCAACAAAAAGAATTTCGAAAAGAAATTCTACAA	2
