bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	3.1|1255209|31|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	100.000	31	0	0	1	31	883034	883004	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	9.20e-09	50.7	1.0	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	883004-883034	CATTATTGTAAGCTGACTTTCCGCCAGCTTC	0
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	3.1|1255209|31|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	100.000	31	0	0	1	31	970434	970404	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	9.20e-09	50.7	1.0	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	970404-970434	CATTATTGTAAGCTGACTTTCCGCCAGCTTC	0
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	3.1|1255209|31|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	100.000	31	0	0	1	31	2788555	2788525	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	9.20e-09	50.7	1.0	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	2788525-2788555	CATTATTGTAAGCTGACTTTCCGCCAGCTTC	0
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	3.1|1255209|31|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	100.000	31	0	0	1	31	1932672	1932702	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	9.20e-09	50.7	1.0	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	1932672-1932702	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	0
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	3.1|1255209|31|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	93.548	31	2	0	1	31	883148	883118	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	7.45e-07	44.4	1.0	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	883118-883148	CATTATTGTAAGCTGACTTTTCGTCAGCTTC	2
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	3.1|1255209|31|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	93.548	31	2	0	1	31	1592240	1592210	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	7.45e-07	44.4	1.0	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	1592210-1592240	CATTATTGTATGCTGACTTTCCGACAGCTTC	2
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	3.1|1255209|31|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	93.548	31	2	0	1	31	453918	453948	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	7.45e-07	44.4	1.0	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	453918-453948	GAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	3.1|1255209|31|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	93.548	31	2	0	1	31	1836494	1836524	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	7.45e-07	44.4	1.0	GAAGCTGGCGGAAAGTCAGCTTACAATAATG	1836494-1836524	GAAGCTGACGTAAAGTCAGCTTACAATAATG	2
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	4.1|1304042|33|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	100.000	33	0	0	1	33	883150	883118	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.19e-09	53.9	1.0	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	883118-883150	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	0
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	4.1|1304042|33|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	96.970	33	1	0	1	33	970550	970518	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.07e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	970518-970550	CATTCTTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	4.1|1304042|33|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	96.970	33	1	0	1	33	79977	80009	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.07e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	79977-80009	CAGAAGCTGACGAAAAGTCAGCTTACGATAATG	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	4.1|1304042|33|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	96.970	33	1	0	1	33	1313141	1313173	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.07e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1313141-1313173	CAGAAGCTGACGAAAAGTCAGCTTACGATAATG	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	4.1|1304042|33|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	96.970	33	1	0	1	33	1836492	1836524	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.07e-08	50.7	1.0	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1836492-1836524	CAGAAGCTGACGTAAAGTCAGCTTACAATAATG	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	6.1|1592265|28|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	96.429	28	1	0	1	28	80013	79986	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.49e-06	42.8	1.0	TGCACTTTATCGTAAGCTGACTTTTCGT	79986-80013	ACGAAAAGTCAGCTTACGATAATGTGCA	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	6.1|1592265|28|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	96.429	28	1	0	1	28	1313177	1313150	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.49e-06	42.8	1.0	TGCACTTTATCGTAAGCTGACTTTTCGT	1313150-1313177	ACGAAAAGTCAGCTTACGATAATGTGCA	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	6.1|1592265|28|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	96.429	28	1	0	1	28	1484801	1484828	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.49e-06	42.8	1.0	TGCACTTTATCGTAAGCTGACTTTTCGT	1484801-1484828	TGCACATTATCGTAAGCTGACTTTTCGT	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	6.1|1592265|28|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	92.857	28	2	0	1	28	883114	883141	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	1.34e-05	39.6	1.0	TGCACTTTATCGTAAGCTGACTTTTCGT	883114-883141	TGCACATTATTGTAAGCTGACTTTTCGT	2
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	13.1|2813861|34|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	100.000	34	0	0	1	34	1255144	1255177	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	4.54e-10	55.5	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	1255144-1255177	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	0
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	13.1|2813861|34|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	100.000	34	0	0	1	34	1313021	1313054	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	4.54e-10	55.5	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	1313021-1313054	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	0
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	13.1|2813861|34|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	97.059	34	1	0	1	34	974583	974550	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	4.09e-09	52.3	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	974550-974583	TTGTAGAATTTCTTTTCGAAATTATCTGTGTTGG	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	13.1|2813861|34|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	97.059	34	1	0	1	34	1359166	1359133	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	4.09e-09	52.3	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	1359133-1359166	TTGTAGAATTTCTTTTCGAAATTCTCTTTGTTGG	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	13.1|2813861|34|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	97.059	34	1	0	1	34	1743820	1743787	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	4.09e-09	52.3	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	1743787-1743820	TTGTAGAATTTCTTTTCGAAATTCTCTTTGTTGG	1
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	13.1|2813861|34|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	94.118	34	2	0	1	34	1251010	1250977	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	3.68e-08	49.1	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	1250977-1251010	TTGTAGAATTTCTTTTCGAAATCCTCTATGTTGG	2
NZ_CP047794	Staphylococcus aureus strain UP_551 chromosome, complete genome	13.1|2813861|34|NZ_CP047794|CRISPRCasFinder	NZ_CP047794.1	Staphylococcus aureus strain UP_551 chromosome, complete genome	94.118	34	2	0	1	34	718941	718974	332060-332142|1070088-1070184|1255182-1255266|1304017-1304099|1411877-1411983|1592234-1592323|1836411-1836491|2343979-2344074|2402867-2402945|2418204-2418295|2685166-2685251|2788384-2788538|2813838-2813917	3.68e-08	49.1	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	718941-718974	CCAACACAGAGAATTTCGAAAAGAAATCCCACAA	2
