The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	0	25609	2870100	head,tail,protease,capsid,holin,terminase,portal	Staphylococcus_phage(100.0%)	28	NA	NA
WP_000625088.1|0_1662_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000025274.1|1677_2865_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000642728.1|2848_3586_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000154559.1|3609_4755_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000238236.1|4774_5059_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5048_5333_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|5316_5679_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114226.1|5675_6080_+	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|6076_6484_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268740.1|6484_7129_+|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_071621395.1|7170_7395_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|7444_7795_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_000504566.1|8039_12569_+|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	97.0	0.0e+00
WP_000567396.1|12565_14050_+|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	99.8	4.5e-297
WP_000582152.1|14065_17848_+	hypothetical protein	NA	A0A068A201	Staphylococcus_phage	99.6	0.0e+00
WP_001000058.1|17840_17993_+	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_001262621.1|18038_18326_+	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_000340977.1|18381_18756_+	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_000034846.1|19167_19950_+	staphylococcal enterotoxin type P	NA	A0A075M4C7	Staphylococcus_phage	99.6	1.6e-149
WP_011447039.1|20152_20329_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_031762631.1|20381_20489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|20540_20795_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861026.1|20806_21562_+	CHAP domain-containing protein	NA	A0A075LZV3	Staphylococcus_phage	100.0	1.2e-152
WP_000920042.1|21752_22244_+	staphylokinase	NA	A0A075LYD3	Staphylococcus_phage	100.0	8.0e-86
WP_000727645.1|23319_23769_-	chemotaxis-inhibiting protein CHIPS	NA	A0A075LZI2	Staphylococcus_phage	100.0	8.7e-79
WP_000702262.1|24451_24802_+	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|24854_25115_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|25429_25609_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
>prophage 2
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	31218	33665	2870100		Staphylococcus_phage(100.0%)	3	NA	NA
WP_000991306.1|31218_32115_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000645727.1|32115_32796_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763043.1|32792_33665_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
>prophage 3
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	39428	39830	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000205106.1|39428_39830_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
>prophage 4
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	44026	46053	2870100		Bacillus_virus(50.0%)	2	NA	NA
WP_000149686.1|44026_44587_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_160176653.1|44955_46053_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.9	2.5e-47
>prophage 5
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	50083	52367	2870100		Bacillus_virus(100.0%)	2	NA	NA
WP_000284436.1|50083_51553_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000040866.1|51545_52367_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
>prophage 6
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	56068	62835	2870100		Gordonia_phage(33.33%)	5	NA	NA
WP_000572878.1|56068_57364_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|57472_57775_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272056.1|57946_58639_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992924.1|58635_60828_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774556.1|60831_62835_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
>prophage 7
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	70009	75038	2870100		Catovirus(33.33%)	5	NA	NA
WP_001231451.1|70009_70957_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
WP_001147865.1|71037_72399_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.6	1.4e-103
WP_000548781.1|72568_73099_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140172.1|73345_74416_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613738.1|74483_75038_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
>prophage 8
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	78490	78904	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001557448.1|78490_78904_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	38.3	6.7e-17
>prophage 9
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	83958	84588	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|83958_84588_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 10
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	100068	101805	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|100068_101805_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 11
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	115042	223593	2870100	transposase,protease,tRNA	Staphylococcus_phage(92.73%)	101	NA	NA
WP_001557163.1|115042_116362_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000063582.1|116945_118007_+	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_000649908.1|118264_119722_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_001144055.1|119708_120437_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
WP_001793998.1|120572_121715_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000181394.1|121719_122190_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_001251224.1|122348_122948_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000031108.1|122972_123125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000901023.1|123672_124068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000116228.1|124263_125649_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000669376.1|126101_126923_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000437969.1|127085_128198_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_001045135.1|128219_128843_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000375864.1|129198_129663_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000992518.1|129841_130966_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000290301.1|131034_131379_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_001802255.1|131917_132016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000238227.1|132306_133503_+	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_000584630.1|133492_136429_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001244175.1|136425_137367_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_000782121.1|137487_138450_-	foldase	NA	NA	NA	NA	NA
WP_000477959.1|138654_139212_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000648118.1|139946_140312_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000004981.1|140453_140876_-	HIT family protein	NA	NA	NA	NA	NA
WP_000216874.1|141009_141750_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_000551836.1|141742_142966_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000737976.1|143089_143593_-	signal transduction protein TraP	NA	NA	NA	NA	NA
WP_001790154.1|143755_143866_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000233526.1|143855_144893_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_000162881.1|144950_145874_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000167542.1|145897_147298_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000132890.1|147620_148175_+	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_010922839.1|149534_150317_+	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_000821658.1|150597_151317_+	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
WP_000713847.1|151351_152080_+	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
WP_001236362.1|153043_153799_+	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
WP_000736709.1|154081_154858_+	staphylococcal enterotoxin type G	NA	NA	NA	NA	NA
WP_000848318.1|155409_156186_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000617704.1|156206_156443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001253432.1|156520_157015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000206343.1|157848_158637_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	98.5	3.6e-144
WP_000473596.1|159999_160935_+	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782463.1|160936_161920_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000543854.1|162289_163081_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000550252.1|163085_163559_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000469591.1|163814_164033_+	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
WP_001092780.1|164505_165087_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_001039427.1|166050_166758_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001039454.1|166882_167605_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001038872.1|167662_168382_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001038704.1|168502_169222_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_011447030.1|169170_169278_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|169379_170099_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_001791797.1|170161_170296_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001793440.1|170276_172016_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
WP_000072627.1|172008_173238_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_001792025.1|174313_174415_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001801861.1|174537_174633_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_000414216.1|175987_176560_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_000627540.1|176660_177002_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000669024.1|177042_177669_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_160176654.1|177743_178739_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.0e-67
WP_001795210.1|178819_179470_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_012840523.1|179772_180228_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_000348364.1|180386_181865_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_000778528.1|181869_182871_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000718107.1|182867_183125_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672013.1|183190_183664_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_001822900.1|183668_184415_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000109906.1|184792_186385_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000933820.1|186756_187953_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000366163.1|188074_188983_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000453306.1|189194_190028_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000623470.1|192024_192378_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_001200542.1|192374_192740_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091442.1|192995_193298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|193557_194271_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_001168903.1|194710_195346_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|195641_196085_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|196071_196515_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671057.1|196627_197098_-	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_000384171.1|197296_197521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|197796_198651_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989121.1|198737_200030_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221177.1|200029_200344_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_001261668.1|200866_202369_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000384185.1|202861_203893_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
WP_000493887.1|203899_204532_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_001159037.1|204542_205724_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_001008549.1|205736_206201_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001196362.1|206322_207324_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001790712.1|207434_207554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|207556_208384_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|208955_209357_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|209479_210043_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|210039_210993_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025067.1|211102_212284_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_001108730.1|212574_214989_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_000836461.1|215010_215322_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_160176655.1|215647_222208_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	1.2e-304
WP_000285020.1|222324_223593_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	99.1	9.1e-57
>prophage 12
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	234998	240326	2870100		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091387.1|234998_235856_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	100.0	6.8e-72
WP_001048368.1|235884_236481_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118314.1|236501_240326_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
>prophage 13
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	249066	250773	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862096.1|249066_250773_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.6	8.0e-274
>prophage 14
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	257377	260008	2870100	tRNA,protease	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186029.1|257377_258640_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
WP_001279338.1|258733_260008_-|protease	trypsin-like serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 15
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	263777	267910	2870100		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808849.1|263777_265382_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
WP_000291420.1|265368_266526_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553924.1|266640_267087_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174280.1|267166_267910_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.0	4.9e-18
>prophage 16
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	285502	288700	2870100		Streptomyces_phage(100.0%)	1	NA	NA
WP_000226918.1|285502_288700_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.5	7.2e-135
>prophage 17
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	293633	295391	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232648.1|293633_295391_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	2.6e-41
>prophage 18
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	300275	308439	2870100		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080028.1|300275_300980_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_015445861.1|300979_302641_+	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_000849428.1|303139_304627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038317.1|304920_307551_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114454.1|307566_308439_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.6e-42
>prophage 19
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	312354	323507	2870100	tRNA,protease	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808621.1|312354_313275_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_001790562.1|313367_313490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435132.1|313687_315625_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	7.8e-116
WP_000049145.1|316050_317544_+	amino acid permease	NA	NA	NA	NA	NA
WP_001791162.1|317772_318300_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_001125540.1|318328_318529_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|318575_318932_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032657.1|319073_319682_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001280022.1|319700_320630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|320634_320745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127573.1|320792_322094_+	trigger factor	NA	NA	NA	NA	NA
WP_000472302.1|322244_323507_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
>prophage 20
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	333074	339721	2870100	tRNA,transposase	Catovirus(50.0%)	5	NA	NA
WP_000425353.1|333074_335705_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
WP_001108346.1|335717_336989_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000261115.1|337258_337966_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_000692869.1|337962_338517_+	JAB domain-containing protein	NA	NA	NA	NA	NA
WP_000868132.1|338635_339721_+|transposase	transposase	transposase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
>prophage 21
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	343052	343784	2870100		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|343052_343784_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 22
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	352351	387963	2870100	tRNA	uncultured_Mediterranean_phage(18.75%)	30	NA	NA
WP_001005768.1|352351_353356_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019178.1|353357_354383_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|354405_355545_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|355563_355824_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|356098_358378_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000595011.1|358580_360854_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000364542.1|360875_361394_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_001058587.1|361821_364011_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000717800.1|364470_365346_+	cell wall amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|365806_367069_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044799.1|367084_368851_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_001790559.1|369183_369312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682646.1|369311_370085_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102726.1|370245_371520_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.5	3.1e-105
WP_000704122.1|371604_372027_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|372126_372309_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|372348_372495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985878.1|372731_373745_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409157.1|374056_375199_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	30.8	5.4e-32
WP_000066097.1|375199_376318_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567017.1|377012_377681_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283312.1|377682_380160_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000734075.1|380502_383133_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|383195_383456_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|383459_383888_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|383902_384211_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342258.1|384495_385134_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	3.2e-10
WP_000137772.1|385136_386060_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|386071_387340_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|387339_387963_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 23
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	404643	410807	2870100		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|404643_405105_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_000953309.1|405163_407311_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.2	1.6e-32
WP_001282563.1|407367_408342_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|408386_408638_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_000368338.1|408983_410807_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 24
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	414301	417409	2870100		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034716.1|414301_416134_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_001119021.1|416269_417409_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.8	1.2e-26
>prophage 25
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	423879	424827	2870100		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|423879_424827_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 26
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	427880	441626	2870100	tRNA	Klosneuvirus(28.57%)	13	NA	NA
WP_001030080.1|427880_429272_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
WP_001797828.1|429606_430230_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411298.1|430240_431059_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217257.1|431119_432937_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
WP_001283055.1|433160_434267_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624577.1|434397_435075_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683940.1|435077_436178_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_001062177.1|436291_437638_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000924220.1|437647_438538_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001213908.1|438663_439449_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564315.1|439490_440354_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095260.1|440340_440751_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|441026_441626_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 27
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	447799	448423	2870100		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223008.1|447799_448423_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 28
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	453967	456779	2870100		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019691.1|453967_455314_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.2	1.7e-61
WP_000202188.1|455306_456779_+	glycine dehydrogenase subunit 2	NA	E3SN07	Prochlorococcus_phage	41.3	2.8e-81
>prophage 29
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	464279	470850	2870100		Indivirus(66.67%)	6	NA	NA
WP_001286928.1|464279_465617_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
WP_000159865.1|465609_465840_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183383.1|465817_466699_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.8	2.0e-10
WP_001124985.1|467130_467583_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942210.1|467598_469278_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291533.1|469428_470850_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
>prophage 30
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	477679	479086	2870100		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|477679_479086_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 31
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	485512	486997	2870100		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|485512_486997_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 32
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	490524	502134	2870100		Klosneuvirus(16.67%)	12	NA	NA
WP_001171335.1|490524_491433_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	32.0	4.4e-05
WP_000365240.1|491514_492057_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000392691.1|492161_492611_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000447733.1|492659_493547_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183429.1|493624_494131_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273371.1|494222_494954_+	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368656.1|494946_495489_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159577.1|495481_496219_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064078.1|496351_497077_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987774.1|497057_498809_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
WP_001557355.1|499052_499979_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001033761.1|499971_502134_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	100.0	2.7e-109
>prophage 33
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	506562	509241	2870100		Bacillus_phage(50.0%)	3	NA	NA
WP_001151997.1|506562_506811_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163801.1|506918_507872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000902099.1|507861_509241_+	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
>prophage 34
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	518665	524132	2870100		Bacillus_phage(25.0%)	7	NA	NA
WP_001043863.1|518665_518938_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450555.1|519368_519941_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|519943_520669_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001817755.1|520685_521630_+	heptaprenyl diphosphate synthase subunit II	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|521721_522171_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|522379_522580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269921.1|522965_524132_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
>prophage 35
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	527794	528370	2870100		Bacillus_virus(100.0%)	1	NA	NA
WP_000005212.1|527794_528370_+	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
>prophage 36
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	531742	539248	2870100	tRNA	unidentified_phage(25.0%)	5	NA	NA
WP_000361540.1|531742_532945_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
WP_000049921.1|532931_533903_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525078.1|533926_536620_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858779.1|536941_538234_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
WP_000362218.1|538561_539248_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	1.2e-07
>prophage 37
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	542988	543615	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_001108889.1|542988_543615_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.7e-24
>prophage 38
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	552940	553819	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_001133021.1|552940_553819_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.4e-19
>prophage 39
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	592770	602160	2870100		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282171.1|592770_593475_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_001795441.1|593719_593914_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000691942.1|593925_594177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000404645.1|594214_595339_+	virulence factor C	NA	NA	NA	NA	NA
WP_000995287.1|595354_595792_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934894.1|596215_597172_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175746.1|597371_597851_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000166059.1|597865_598705_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	77.3	2.3e-48
WP_000159903.1|598790_599324_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913317.1|599316_599745_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473653.1|599756_600257_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|600256_600478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342132.1|600669_602160_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.9e-22
>prophage 40
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	605570	607582	2870100		Bacillus_phage(50.0%)	2	NA	NA
WP_000192137.1|605570_606230_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166801.1|606226_607582_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 41
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	613747	614539	2870100		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|613747_614539_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 42
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	618079	623110	2870100	lysis	Escherichia_phage(33.33%)	7	NA	NA
WP_160176658.1|618079_619216_-	toxic anion resistance protein	NA	A0A1C3S7K8	Escherichia_phage	24.8	8.5e-14
WP_001788788.1|619247_619877_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	lysis	NA	NA	NA	NA
WP_001215907.1|619895_620165_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|620327_620636_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|620806_621007_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876201.1|621203_621605_+	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000216946.1|621844_623110_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
>prophage 43
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	631157	632759	2870100		Klosneuvirus(100.0%)	1	NA	NA
WP_000942303.1|631157_632759_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 44
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	637848	641302	2870100		Indivirus(50.0%)	3	NA	NA
WP_000079447.1|637848_638700_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000974847.1|638706_639348_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077571.1|639487_641302_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	5.1e-154
>prophage 45
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	644716	645418	2870100		Tupanvirus(100.0%)	1	NA	NA
WP_000571259.1|644716_645418_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	2.0e-13
>prophage 46
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	653514	655869	2870100		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000153613.1|653514_654297_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	35.9	2.7e-27
WP_000173833.1|654298_655297_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.9	8.5e-34
WP_000604816.1|655302_655869_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	32.1	1.3e-23
>prophage 47
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	660187	661450	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000283016.1|660187_661450_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.3	2.6e-96
>prophage 48
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	671109	675503	2870100		Bacillus_phage(50.0%)	2	NA	NA
WP_001289546.1|671109_673512_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.4	1.8e-93
WP_031771138.1|673511_675503_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	8.0e-116
>prophage 49
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	681494	683141	2870100		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|681494_683141_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 50
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	686810	687932	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691301.1|686810_687932_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 51
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	692082	697738	2870100		Phage_Wrath(25.0%)	7	NA	NA
WP_001208755.1|692082_692706_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	5.9e-17
WP_000380730.1|693085_693949_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	9.1e-16
WP_001791425.1|694022_694127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000688122.1|694123_695101_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.7	8.0e-186
WP_001085655.1|695257_695527_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|695980_696130_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000082539.1|696220_697738_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	2.3e-91
>prophage 52
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	707876	712152	2870100		Bacillus_phage(50.0%)	6	NA	NA
WP_000841346.1|707876_708410_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027143.1|708548_708737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000202390.1|708849_709452_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670307.1|709448_710540_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000603970.1|710543_711275_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000593436.1|711243_712152_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	3.1e-22
>prophage 53
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	716535	720839	2870100	head	Staphylococcus_phage(80.0%)	8	NA	NA
WP_000899334.1|716535_716772_-|head	phage head morphogenesis protein	head	Q4ZE35	Staphylococcus_virus	70.6	2.3e-22
WP_000956747.1|716817_717069_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000477492.1|717196_717301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|717811_717997_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_001788716.1|718420_718531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002340.1|719230_719437_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_001795785.1|719730_719955_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.5	5.0e-19
WP_001791958.1|720641_720839_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	1.1e-09
>prophage 54
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	725908	726385	2870100		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|725908_726385_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 55
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	732327	738809	2870100		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103743.1|732327_733146_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_001077635.1|733620_734163_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516269.1|734168_736178_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.0	4.8e-60
WP_000073352.1|736190_738809_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
>prophage 56
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	748223	749267	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|748223_749267_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 57
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	753465	759006	2870100		Bacillus_virus(33.33%)	4	NA	NA
WP_000664775.1|753465_754752_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	28.4	7.9e-16
WP_000089941.1|754751_756017_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	1.2e-40
WP_001293306.1|756047_756761_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001811366.1|756765_759006_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	6.9e-84
>prophage 58
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	764146	775959	2870100	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864190.1|764146_765118_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282298.1|765132_766050_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|766218_766569_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043635.1|766954_769072_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_000020853.1|769076_769394_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|769390_769675_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097460.1|769695_770871_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036633.1|770891_771359_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_001801936.1|771648_775959_-	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 59
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	780232	781003	2870100		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473699.1|780232_781003_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 60
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	785782	799456	2870100	tRNA,protease	Erwinia_phage(16.67%)	10	NA	NA
WP_000379054.1|785782_787186_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	4.9e-27
WP_000072681.1|787251_787797_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015601.1|787793_788690_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	3.6e-31
WP_000195254.1|789107_790415_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001557331.1|790570_792646_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000672869.1|793866_795111_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041666.1|795138_796257_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_000110253.1|796483_797392_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.0e-17
WP_001020801.1|797413_798580_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176393.1|798688_799456_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 61
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	812840	815090	2870100		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|812840_813572_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|813687_813921_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|814355_815090_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 62
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	825460	827455	2870100		Moumouvirus(100.0%)	1	NA	NA
WP_000579563.1|825460_827455_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 63
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	830602	831538	2870100	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161291.1|830602_831538_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 64
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	836550	838807	2870100		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_000722165.1|836550_837750_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
WP_000933956.1|837965_838184_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368226.1|838183_838807_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	1.0e-21
>prophage 65
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	842121	842733	2870100		Pandoravirus(100.0%)	1	NA	NA
WP_160176660.1|842121_842733_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.3	6.2e-27
>prophage 66
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	846700	851311	2870100		Halovirus(33.33%)	4	NA	NA
WP_001190913.1|846700_847801_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_000767028.1|847802_849077_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016166.1|849094_849976_-	aspartate carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_001178619.1|850003_851311_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 67
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	855775	858529	2870100	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000384691.1|855775_858529_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	28.0	3.6e-90
>prophage 68
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	878111	878300	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245796.1|878111_878300_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	85.2	2.5e-19
>prophage 69
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	887316	889276	2870100		Staphylococcus_phage(100.0%)	3	NA	NA
WP_001802045.1|887316_887541_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	5.6e-18
WP_000765708.1|887497_887644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000857488.1|888316_889276_+	beta-channel forming cytolysin	NA	A0A2H4PQH7	Staphylococcus_phage	30.3	7.4e-35
>prophage 70
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	904906	909464	2870100		Staphylococcus_phage(33.33%)	3	NA	NA
WP_001018928.1|904906_905221_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249272.1|905393_907742_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.1	3.2e-15
WP_000161938.1|907751_909464_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
>prophage 71
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	914204	915263	2870100	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003566.1|914204_915263_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
>prophage 72
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	927209	930117	2870100		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_000401377.1|927209_927692_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263796.1|927693_928236_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814565.1|928305_928695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|928697_928952_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757575.1|929190_930117_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	2.2e-12
>prophage 73
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	941634	943482	2870100		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182653.1|941634_943482_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 74
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	951614	960447	2870100		Mycoplasma_phage(25.0%)	9	NA	NA
WP_000433551.1|951614_952709_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.4e-37
WP_001020625.1|952721_953261_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455597.1|953404_953680_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|953847_955254_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000863439.1|955257_956550_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068176.1|956640_957618_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035320.1|957621_958734_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000668336.1|958904_959531_-	cell-wall-binding lipoprotein	NA	NA	NA	NA	NA
WP_000957037.1|959895_960447_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.0	1.6e-13
>prophage 75
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	966459	970839	2870100		Bacillus_virus(50.0%)	5	NA	NA
WP_001289618.1|966459_966693_+	glutaredoxin family protein	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040051.1|966929_968648_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|968650_968917_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505966.1|969070_969613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160176662.1|969666_970839_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	43.1	1.8e-75
>prophage 76
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	974270	989032	2870100		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921965.1|974270_975671_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
WP_000273253.1|975663_976470_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101899.1|976736_977984_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709277.1|978005_979484_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	3.2e-77
WP_000238669.1|979498_980065_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000030811.1|980067_981096_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000483720.1|981088_982573_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000032740.1|982551_984741_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000666806.1|984733_985405_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000848350.1|985406_985670_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|985669_986374_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010413.1|986377_987502_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861573.1|987488_987971_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_000225836.1|988171_989032_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.8	4.4e-39
>prophage 77
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	999486	1003233	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074534.1|999486_1003233_+	bifunctional autolysin	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	1.1e-54
>prophage 78
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1006899	1007910	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000676537.1|1006899_1007910_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	32.3	6.2e-16
>prophage 79
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1016215	1019936	2870100		Enterococcus_phage(50.0%)	7	NA	NA
WP_001788574.1|1016215_1016506_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	38.0	7.5e-07
WP_001790177.1|1016569_1016701_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081351.1|1016746_1017706_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766008.1|1018193_1018550_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001792054.1|1018638_1018776_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_001795266.1|1018916_1019207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571167.1|1019294_1019936_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
>prophage 80
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1030130	1035341	2870100	protease	Pithovirus(33.33%)	3	NA	NA
WP_001795272.1|1030130_1032455_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928413.1|1032673_1033477_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001049950.1|1033778_1035341_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
>prophage 81
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1054273	1056082	2870100		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082725.1|1054273_1056082_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
>prophage 82
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1061894	1063864	2870100		Bacillus_virus(100.0%)	2	NA	NA
WP_000427767.1|1061894_1062875_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	1.3e-15
WP_001067052.1|1062877_1063864_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	1.4e-15
>prophage 83
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1067515	1069529	2870100		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000786734.1|1067515_1068457_-	ATP-binding cassette domain-containing protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
WP_000140050.1|1068446_1069529_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
>prophage 84
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1078120	1084930	2870100		Micromonas_sp._RCC1109_virus(33.33%)	4	NA	NA
WP_000619360.1|1078120_1079266_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.0	1.5e-05
WP_001047069.1|1079375_1080245_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000353954.1|1080303_1082913_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001044230.1|1083115_1084930_-	O-acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
>prophage 85
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1090049	1093703	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000154921.1|1090049_1093703_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	2.0e-24
>prophage 86
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1103857	1111038	2870100		Staphylococcus_phage(33.33%)	6	NA	NA
WP_000185319.1|1103857_1104787_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	3.7e-39
WP_000138487.1|1105313_1106558_-	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_000167309.1|1106666_1107857_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.0e-33
WP_000838029.1|1108164_1109292_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1109652_1110030_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035063.1|1110444_1111038_-	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
>prophage 87
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1120958	1124586	2870100		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009692.1|1120958_1122434_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	4.5e-47
WP_000046076.1|1122564_1123773_-	NADH dehydrogenase	NA	NA	NA	NA	NA
WP_001143495.1|1124226_1124586_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.7e-14
>prophage 88
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1128629	1131298	2870100		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1128629_1129844_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129659.1|1129840_1131298_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.5	2.6e-39
>prophage 89
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1134524	1193685	2870100	head,tail,capsid,holin,plate,transposase,terminase,portal,integrase	Staphylococcus_phage(73.61%)	85	1158646:1158662	1193301:1193317
WP_001557163.1|1134524_1135844_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000598444.1|1136049_1136433_-	YutD family protein	NA	NA	NA	NA	NA
WP_000201875.1|1136562_1137480_-	lipoyl synthase	NA	NA	NA	NA	NA
WP_001241246.1|1137563_1138883_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000927632.1|1138909_1139737_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_000608129.1|1139749_1140598_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_016170465.1|1140645_1140729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000267236.1|1140939_1142007_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_000582326.1|1142020_1143061_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_000274029.1|1143425_1143740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000382163.1|1144569_1144770_-	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000139423.1|1144756_1144867_-	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001788502.1|1144937_1145090_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_001035620.1|1145464_1146022_+	DUF4888 domain-containing protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
WP_001141517.1|1146081_1147494_-	CHAP domain-containing protein	NA	A0A0F6N3N1	Staphylococcus_phage	100.0	5.8e-286
WP_000351119.1|1147480_1147756_-|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_000398868.1|1147811_1148207_-	hypothetical protein	NA	A1KXB6	Staphylococcus_virus	100.0	1.6e-68
WP_000276662.1|1148212_1149451_-|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	100.0	1.6e-210
WP_000524022.1|1149463_1151362_-	CHAP domain-containing protein	NA	A0EX80	Staphylococcus_virus	99.7	0.0e+00
WP_000466778.1|1151498_1151798_-	DUF2951 domain-containing protein	NA	A0A0H4ITZ0	Staphylococcus_phage	100.0	7.6e-47
WP_000782200.1|1151837_1152011_-	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000705896.1|1152014_1152392_-	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000259619.1|1152391_1154215_-|plate	BppU family phage baseplate upper protein	plate	A1KX42	Staphylococcus_virus	99.2	3.9e-295
WP_000369017.1|1154214_1156125_-	hypothetical protein	NA	Q4ZDD6	Staphylococcus_virus	98.9	0.0e+00
WP_000152714.1|1156139_1158041_-	peptidase	NA	I1W634	Staphylococcus_phage	99.8	0.0e+00
WP_000350675.1|1158049_1158997_-|tail	phage tail family protein	tail	A0A0F6N3L4	Staphylococcus_phage	100.0	2.8e-183
1158646:1158662	attL	TGTTTTTATCTAATTTC	NA	NA	NA	NA
WP_000141480.1|1159009_1162477_-	hypothetical protein	NA	A0A0F6N3F9	Staphylococcus_phage	100.0	4.2e-245
WP_000105584.1|1162493_1162838_-	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_001100161.1|1162867_1163233_-	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
WP_000002577.1|1163294_1163876_-|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
WP_000188643.1|1163894_1164278_-	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	98.4	3.8e-67
WP_001017817.1|1164289_1164637_-	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	99.1	2.0e-59
WP_001268312.1|1164636_1164939_-	hypothetical protein	NA	A4ZFB6	Staphylococcus_virus	100.0	1.1e-50
WP_000208960.1|1164935_1165268_-|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001114086.1|1165276_1165564_-	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.4e-45
WP_000438511.1|1165585_1166560_-|capsid	phage major capsid protein	capsid	E0Y3L0	Staphylococcus_virus	100.0	2.2e-183
WP_000392151.1|1166573_1167194_-	DUF4355 domain-containing protein	NA	S4V984	Staphylococcus_phage	98.5	1.7e-69
WP_000072208.1|1167302_1167473_-	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
WP_001133044.1|1167545_1168541_-|head	phage head morphogenesis protein	head	A0A0F6N3F1	Staphylococcus_phage	100.0	2.0e-184
WP_160176664.1|1168547_1170086_-|portal	phage portal protein	portal	A0A0F6N4I8	Staphylococcus_phage	99.8	1.2e-292
WP_000273011.1|1170096_1171392_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0F6N3L3	Staphylococcus_phage	100.0	3.0e-257
WP_001038244.1|1171394_1171889_-|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	100.0	7.8e-89
WP_000162701.1|1172076_1172499_-	RinA family phage transcriptional activator	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
WP_000990004.1|1172564_1172669_-	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	7.0e-08
WP_000595257.1|1172669_1172843_-	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_000608278.1|1172835_1173072_-	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
WP_001072795.1|1173064_1173268_-	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
WP_000132921.1|1173264_1173459_-	hypothetical protein	NA	A0A2I6PEC2	Staphylococcus_phage	100.0	6.0e-29
WP_000617154.1|1173455_1173662_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	72.1	1.0e-18
WP_000185647.1|1173698_1174232_-	dUTP pyrophosphatase	NA	A1KX16	Staphylococcus_virus	99.4	2.4e-96
WP_072471035.1|1174224_1174419_-	hypothetical protein	NA	A0A0E3T9L7	Staphylococcus_phage	87.5	8.5e-23
WP_001065060.1|1174381_1174636_-	DUF1024 family protein	NA	A1KX15	Staphylococcus_virus	97.6	2.5e-38
WP_001557190.1|1174628_1175000_-	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	100.0	3.6e-54
WP_000131376.1|1175008_1175251_-	hypothetical protein	NA	A0A0F6N3E1	Staphylococcus_phage	98.8	1.9e-40
WP_000029376.1|1175254_1175611_-	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	100.0	6.5e-61
WP_000101252.1|1175738_1176044_-	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
WP_001187243.1|1176044_1176230_-	DUF3113 family protein	NA	A0A0F6N3K7	Staphylococcus_phage	100.0	1.1e-27
WP_000049794.1|1176234_1176639_-	DUF1064 domain-containing protein	NA	A1KX76	Staphylococcus_virus	100.0	9.6e-69
WP_001123695.1|1176648_1176870_-	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000256589.1|1176882_1177041_-	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_000803062.1|1177034_1177814_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000414755.1|1178660_1178942_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_001124438.1|1179080_1179755_-	hypothetical protein	NA	R4IH15	Staphylococcus_phage	96.9	1.4e-125
WP_000934385.1|1179768_1180197_-	single-stranded DNA-binding protein	NA	B2ZYV4	Staphylococcus_phage	100.0	3.9e-60
WP_000139720.1|1180196_1180820_-	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000815401.1|1180812_1181034_-	DUF2483 domain-containing protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000291090.1|1181043_1181304_-	DUF1108 family protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
WP_000165363.1|1181308_1181611_-	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
WP_000066011.1|1181704_1181866_-	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
WP_000977381.1|1181858_1182080_-	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
WP_001094943.1|1182093_1182543_-	hypothetical protein	NA	A1KWZ2	Staphylococcus_virus	100.0	3.0e-79
WP_000187184.1|1182582_1182807_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001002757.1|1182807_1183575_-	phage antirepressor Ant	NA	A0A0F6N3N8	Staphylococcus_phage	100.0	1.1e-142
WP_000108122.1|1183574_1183769_-	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
WP_001055143.1|1184031_1184364_+	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_000775187.1|1184380_1185055_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_000661437.1|1185082_1185808_+	hypothetical protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_000392186.1|1185839_1186772_+	hypothetical protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
WP_000337826.1|1186751_1186931_-	hypothetical protein	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
WP_001145726.1|1187043_1188093_+|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	99.7	4.5e-203
WP_001074405.1|1188160_1189558_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001010508.1|1189708_1190173_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_000807663.1|1190162_1191404_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	8.2e-111
WP_000205567.1|1191518_1192826_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1192923_1193685_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
1193301:1193317	attR	TGTTTTTATCTAATTTC	NA	NA	NA	NA
>prophage 90
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1197172	1198198	2870100		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571213.1|1197172_1198198_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	9.4e-28
>prophage 91
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1201514	1206692	2870100		Streptococcus_phage(50.0%)	8	NA	NA
WP_000589549.1|1201514_1201871_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001147952.1|1202014_1202335_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	3.1e-06
WP_000422908.1|1202485_1203025_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150011.1|1203107_1203824_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.1	1.5e-16
WP_000974460.1|1203971_1204394_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1204792_1205287_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255551.1|1205441_1206059_+	amino acid transporter	NA	NA	NA	NA	NA
WP_001802951.1|1206131_1206692_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.4	3.8e-31
>prophage 92
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1210092	1211336	2870100		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1210092_1210293_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_000141557.1|1210649_1211336_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	1.7e-33
>prophage 93
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1220398	1229274	2870100		Staphylococcus_phage(50.0%)	9	NA	NA
WP_000757397.1|1220398_1221127_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.3e-18
WP_001057759.1|1221317_1221464_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058299.1|1221479_1221803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085183.1|1223124_1223589_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	98.7	1.6e-80
WP_001050048.1|1223610_1225983_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.8	4.3e-92
WP_001165959.1|1226016_1226757_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA	NA
WP_000556760.1|1226872_1227106_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1227172_1227631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160176665.1|1227969_1229274_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	5.1e-196
>prophage 94
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1238501	1244432	2870100		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1238501_1239089_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|1239652_1240597_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|1240707_1241703_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369722.1|1241699_1242611_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1243496_1244432_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 95
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1248879	1251726	2870100		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662677.1|1248879_1251726_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.2	0.0e+00
>prophage 96
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1255044	1255884	2870100		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000753319.1|1255044_1255884_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 97
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1261962	1267668	2870100		Streptococcus_phage(66.67%)	5	NA	NA
WP_001557172.1|1261962_1263045_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	9.9e-44
WP_000686344.1|1263408_1264275_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192949.1|1264418_1265060_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.7	5.3e-37
WP_000258150.1|1265224_1266280_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|1266597_1267668_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 98
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1278467	1301940	2870100		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616840.1|1278467_1279229_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
WP_001245577.1|1279225_1280182_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|1280168_1281140_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|1281178_1281334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1281514_1282486_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855514.1|1282603_1284709_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1284671_1285070_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068501.1|1285870_1286737_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1286756_1287257_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|1287597_1289103_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_031760357.1|1289180_1289282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|1289372_1290290_+	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_000197262.1|1291168_1291711_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663030.1|1292049_1293108_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000180991.1|1293347_1294862_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589248.1|1294854_1295832_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	7.1e-25
WP_000983677.1|1296053_1297835_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525106.1|1297846_1299730_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_000098285.1|1299999_1301940_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.3e-110
>prophage 99
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1305079	1314926	2870100		Pandoravirus(12.5%)	12	NA	NA
WP_001217796.1|1305079_1306231_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
WP_000604514.1|1306214_1306808_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|1307158_1307827_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|1307828_1308248_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1308251_1308965_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000604990.1|1309063_1309648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093562.1|1309927_1310368_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1310710_1311184_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1311158_1311845_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|1311844_1312900_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702781.1|1312971_1313955_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	43.3	1.5e-62
WP_000931238.1|1314086_1314926_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.5	9.6e-55
>prophage 100
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1326538	1327912	2870100		Megavirus(100.0%)	1	NA	NA
WP_000952041.1|1326538_1327912_-	deoxyribodipyrimidine photo-lyase	NA	K7Y8W8	Megavirus	31.6	2.8e-43
>prophage 101
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1332889	1339169	2870100		Bacillus_phage(33.33%)	6	NA	NA
WP_000857598.1|1332889_1334563_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	23.2	3.4e-11
WP_000737160.1|1334559_1336191_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	6.7e-12
WP_000469894.1|1336409_1337285_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|1337456_1338140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148826.1|1338142_1338601_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820897.1|1338602_1339169_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	4.7e-21
>prophage 102
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1345959	1346433	2870100		Pandoravirus(100.0%)	1	NA	NA
WP_000833486.1|1345959_1346433_-	cupin	NA	A0A291AU44	Pandoravirus	39.4	1.6e-14
>prophage 103
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1351695	1352493	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1351695_1352493_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 104
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1357324	1358086	2870100		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|1357324_1358086_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 105
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1362460	1363504	2870100		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_001030772.1|1362460_1363504_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
>prophage 106
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1370027	1370825	2870100		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1370027_1370825_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 107
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1374050	1378009	2870100		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1374050_1375778_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793067.1|1376198_1377494_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|1377610_1378009_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 108
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1384943	1385687	2870100		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|1384943_1385687_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 109
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1398225	1398786	2870100	integrase	Streptococcus_phage(100.0%)	1	1392379:1392393	1402376:1402390
1392379:1392393	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|1398225_1398786_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|1398225_1398786_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
1402376:1402390	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 110
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1411614	1414968	2870100		Tupanvirus(50.0%)	3	NA	NA
WP_001200748.1|1411614_1412625_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.3	5.6e-33
WP_001792725.1|1413123_1413645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000180234.1|1413672_1414968_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 111
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1422540	1423863	2870100		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860592.1|1422540_1423863_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.8	2.6e-107
>prophage 112
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1435167	1435824	2870100		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455256.1|1435167_1435824_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	1.1e-45
>prophage 113
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1439465	1442786	2870100		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100835.1|1439465_1440842_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	3.9e-21
WP_000347061.1|1441385_1442786_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	9.4e-55
>prophage 114
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1466074	1466737	2870100		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067261.1|1466074_1466737_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 115
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1473320	1474508	2870100		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250823.1|1473320_1474508_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.6	4.4e-45
>prophage 116
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1477536	1488490	2870100		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1477536_1479618_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1479740_1480211_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1480276_1480690_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1480787_1481042_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA	NA
WP_001788197.1|1481178_1484775_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_000918667.1|1484938_1488490_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 117
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1492173	1496956	2870100	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1492173_1492722_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1492734_1492917_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1492972_1493116_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872882.1|1493230_1493800_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664737.1|1493880_1494405_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|1494404_1495151_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|1495158_1495563_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631969.1|1495555_1496956_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.8	1.2e-54
>prophage 118
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1502967	1505424	2870100	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897132.1|1502967_1505424_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpC	protease	A0A1C3S747	Escherichia_phage	41.2	1.4e-133
>prophage 119
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1524229	1534500	2870100	tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1524229_1525717_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|1525769_1525862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613722.1|1526255_1526732_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|1526728_1527094_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167944.1|1527071_1527875_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.0	3.0e-21
WP_000057594.1|1528090_1529023_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148598.1|1529201_1530083_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167888.1|1530310_1532404_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1532660_1533200_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176709.1|1533204_1534500_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
>prophage 120
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1543756	1546221	2870100		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1543756_1544722_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252543.1|1544868_1546221_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 121
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1552126	1555224	2870100	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_001051136.1|1552126_1554100_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.0	3.2e-93
WP_000279926.1|1554384_1555224_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 122
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1559130	1559748	2870100		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272126.1|1559130_1559748_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 123
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1568886	1570584	2870100		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109040.1|1568886_1570584_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.3	1.9e-54
>prophage 124
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1587232	1593471	2870100		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170264.1|1587232_1588237_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.2	1.6e-24
WP_000825530.1|1588568_1589411_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467994.1|1589447_1590107_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569281.1|1590110_1591136_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	3.7e-32
WP_001036648.1|1591430_1592573_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634098.1|1592565_1593471_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	3.8e-49
>prophage 125
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1619417	1622177	2870100		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000072584.1|1619417_1620629_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.2	2.2e-44
WP_031770049.1|1620632_1622177_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	97.9	1.8e-285
>prophage 126
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1634715	1640164	2870100	transposase	Paenibacillus_phage(25.0%)	5	NA	NA
WP_000159787.1|1634715_1634988_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	1.3e-13
WP_000041880.1|1635386_1636091_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.1	5.8e-29
WP_000551643.1|1636482_1637019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160176670.1|1637131_1638673_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264071.1|1638697_1640164_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 127
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1649124	1650648	2870100		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930514.1|1649124_1650648_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 128
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1658962	1665291	2870100		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|1658962_1659466_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1659486_1659783_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052484.1|1660026_1660218_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	1.1e-22
WP_001218732.1|1660303_1661401_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_160176672.1|1661412_1661616_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_000373073.1|1661645_1662527_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001557587.1|1662680_1663526_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655692.1|1664187_1665291_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.0	3.9e-11
>prophage 129
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1675229	1676072	2870100		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209551.1|1675229_1676072_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.2	3.8e-11
>prophage 130
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1697381	1700116	2870100		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280799.1|1697381_1698404_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
WP_001191954.1|1698381_1699326_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000449069.1|1699315_1700116_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.4	5.8e-41
>prophage 131
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1705019	1749106	2870100	head,tail,capsid,protease,holin,plate,terminase,portal,integrase	Staphylococcus_phage(90.32%)	63	1704268:1704285	1749200:1749217
1704268:1704285	attL	ATCCCATCCTTGTATGAT	NA	NA	NA	NA
WP_160176673.1|1705019_1706474_-	CHAP domain-containing protein	NA	U5U7D2	Staphylococcus_phage	99.2	6.3e-288
WP_000339144.1|1706484_1706787_-|holin	phage holin	holin	B7T0L0	Staphylococcus_virus	100.0	4.1e-48
WP_000466784.1|1706922_1707222_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000916020.1|1707267_1707432_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_001166599.1|1707424_1707814_-	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000067131.1|1707813_1709280_-|plate	BppU family phage baseplate upper protein	plate	A0A2I6PE72	Staphylococcus_phage	100.0	1.5e-273
WP_000429558.1|1709279_1711190_-	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000179858.1|1711205_1711496_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_111157855.1|1711495_1713079_-	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	99.8	3.5e-308
WP_020444679.1|1713087_1713912_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	1.2e-158
WP_160176674.1|1713911_1720088_-|tail	phage tail tape measure protein	tail	A0A2I6PDS2	Staphylococcus_phage	98.8	0.0e+00
WP_000438833.1|1720101_1720260_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_000589167.1|1720301_1720652_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000169131.1|1720709_1721165_-	Ig domain-containing protein	NA	Q9B0D4	Staphylococcus_phage	100.0	2.8e-77
WP_000807540.1|1721256_1721898_-|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	100.0	1.0e-120
WP_001023802.1|1721932_1722328_-	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000110020.1|1722328_1722730_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_000395501.1|1722726_1723059_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000050975.1|1723070_1723349_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
WP_001142733.1|1723417_1724581_-|capsid	phage major capsid protein	capsid	A0A2I6PE62	Staphylococcus_phage	99.7	6.1e-217
WP_000061866.1|1724592_1725366_-|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
WP_001100670.1|1725349_1726588_-|portal	phage portal protein	portal	A0A2I6PEA6	Staphylococcus_phage	100.0	6.9e-235
WP_160176675.1|1726592_1728284_-|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	99.8	0.0e+00
WP_000778932.1|1728273_1728579_-|terminase	terminase	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_000160689.1|1728707_1729022_-	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000513699.1|1729178_1729616_-	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
WP_078171455.1|1729628_1730996_-	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	99.8	3.9e-263
WP_000665203.1|1730976_1731267_-	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_015978074.1|1731400_1731505_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_094978771.1|1731607_1732663_-	hypothetical protein	NA	A0A0K1LKN1	Staphylococcus_phage	100.0	3.6e-208
WP_000265258.1|1734106_1734307_-	DUF1514 domain-containing protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
WP_000595260.1|1734374_1734527_-	transcriptional activator RinB	NA	A7TWI2	Staphylococcus_phage	100.0	2.6e-19
WP_061823897.1|1734523_1734919_-	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	98.5	2.4e-64
WP_000481976.1|1734902_1735139_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	93.6	7.6e-34
WP_000195833.1|1735163_1735400_-	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	92.3	1.9e-32
WP_000028780.1|1735396_1735639_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000185680.1|1735675_1736212_-	hypothetical protein	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
WP_057485224.1|1736204_1736453_-	DUF1024 family protein	NA	Q9B0F3	Staphylococcus_virus	97.6	2.0e-37
WP_061823896.1|1736445_1736877_-	hypothetical protein	NA	Q4ZBT4	Staphylococcus_virus	97.2	3.1e-73
WP_000983947.1|1736876_1737068_-	hypothetical protein	NA	Q4ZBT5	Staphylococcus_virus	100.0	1.5e-27
WP_001062709.1|1737064_1737457_-	hypothetical protein	NA	A0A2I6PE39	Staphylococcus_phage	100.0	1.6e-68
WP_016528724.1|1737471_1737720_-	hypothetical protein	NA	Q4ZBT7	Staphylococcus_virus	93.6	3.8e-36
WP_000029381.1|1737720_1738080_-	hypothetical protein	NA	A0A0E3T8L4	Staphylococcus_phage	95.8	2.7e-59
WP_001187249.1|1738080_1738266_-	DUF3113 family protein	NA	A0A0N9BBI1	Staphylococcus_phage	95.1	6.0e-26
WP_000152769.1|1738265_1738421_-	hypothetical protein	NA	A0A2I6PDP0	Staphylococcus_phage	94.1	3.5e-19
WP_076050776.1|1738432_1740385_-	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	99.7	0.0e+00
WP_000645045.1|1740452_1741010_-	DUF2815 family protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
WP_000762530.1|1741035_1742202_-	DUF2800 domain-containing protein	NA	B5WZM3	Staphylococcus_phage	100.0	8.3e-222
WP_000985972.1|1742198_1742561_-	hypothetical protein	NA	B5WZM2	Staphylococcus_phage	100.0	8.3e-56
WP_000174998.1|1742575_1742899_-	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	100.0	6.5e-52
WP_001285954.1|1742977_1743139_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124160.1|1743151_1743415_-	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
WP_001097552.1|1743439_1743655_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_000642492.1|1743710_1743920_+	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
WP_000939498.1|1743909_1744053_-	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_001148544.1|1744081_1744858_-	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_001121027.1|1744871_1745108_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_000333630.1|1745259_1745574_+	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	100.0	9.8e-53
WP_000525004.1|1745586_1746048_+	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000825948.1|1746065_1746650_+	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	100.0	1.4e-68
WP_000705242.1|1746879_1747047_+	hypothetical protein	NA	Q4ZDJ4	Staphylococcus_virus	98.2	3.0e-24
WP_117434767.1|1747186_1747726_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	32.4	1.5e-13
WP_031883891.1|1747900_1749106_+|integrase	site-specific integrase	integrase	A0A1X9H094	Staphylococcus_phage	99.8	1.1e-221
1749200:1749217	attR	ATCCCATCCTTGTATGAT	NA	NA	NA	NA
>prophage 132
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1763287	1763965	2870100		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911017.1|1763287_1763965_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	1.6e-31
>prophage 133
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1779635	1784075	2870100		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549287.1|1779635_1784075_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	25.6	6.3e-28
>prophage 134
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1794680	1796342	2870100		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570070.1|1794680_1795340_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
WP_000736784.1|1795391_1796342_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
>prophage 135
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1805140	1806577	2870100		Pandoravirus(100.0%)	1	NA	NA
WP_000164003.1|1805140_1806577_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.7	1.1e-29
>prophage 136
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1810337	1814876	2870100		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000925394.1|1810337_1812077_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	1.5e-62
WP_000608818.1|1812336_1813011_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975351.1|1813154_1814876_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 137
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1824203	1825247	2870100		Synechococcus_phage(100.0%)	1	NA	NA
WP_000645608.1|1824203_1825247_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.9	3.5e-14
>prophage 138
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1832461	1833991	2870100		Vibrio_phage(100.0%)	1	NA	NA
WP_000838205.1|1832461_1833991_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	50.7	4.5e-10
>prophage 139
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1842866	1844372	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008400.1|1842866_1844372_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	6.0e-39
>prophage 140
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1855479	1860838	2870100		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894660.1|1855479_1857729_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
WP_000837116.1|1858316_1859285_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127990.1|1859281_1860838_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 141
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1871048	1873108	2870100		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818915.1|1871048_1872146_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166920.1|1872529_1873108_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.1	9.7e-14
>prophage 142
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1881657	1884845	2870100		Planktothrix_phage(33.33%)	3	NA	NA
WP_000067352.1|1881657_1883250_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	4.1e-22
WP_000794565.1|1883759_1883957_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	43.3	2.1e-05
WP_000960712.1|1884122_1884845_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.8	4.1e-22
>prophage 143
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1888716	1889397	2870100		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571407.1|1888716_1889397_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	2.9e-33
>prophage 144
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1906202	1907387	2870100		Klosneuvirus(100.0%)	1	NA	NA
WP_001084442.1|1906202_1907387_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	2.0e-34
>prophage 145
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1912223	1922507	2870100		Tupanvirus(50.0%)	3	NA	NA
WP_000605281.1|1912223_1919399_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	29.7	4.5e-68
WP_000826861.1|1919845_1921096_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706135.1|1921481_1922507_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.5	8.5e-29
>prophage 146
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1926042	1929272	2870100		Bacillus_virus(50.0%)	4	NA	NA
WP_000590855.1|1926042_1926783_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.1	2.5e-38
WP_000171919.1|1927124_1927637_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356963.1|1927815_1928019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013485.1|1928312_1929272_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 147
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1932613	1935098	2870100		Catovirus(50.0%)	2	NA	NA
WP_000723436.1|1932613_1933759_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	25.9	4.6e-23
WP_000779504.1|1933835_1935098_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.5	4.3e-22
>prophage 148
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1941933	1948498	2870100		Catovirus(50.0%)	6	NA	NA
WP_000413171.1|1941933_1943058_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
WP_001028283.1|1943061_1944171_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459062.1|1944183_1945212_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_000940790.1|1945201_1947025_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.1	5.2e-29
WP_000565304.1|1947044_1947809_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037332.1|1947811_1948498_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
>prophage 149
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1952518	1953694	2870100		Clostridium_phage(100.0%)	1	NA	NA
WP_000469833.1|1952518_1953694_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A7RTT7	Clostridium_phage	27.6	2.0e-29
>prophage 150
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1959133	1959907	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1959133_1959907_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 151
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1967938	1968538	2870100		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1967938_1968538_-	Superoxide dismutase [Mn/Fe] 2	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 152
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1973475	1978572	2870100		Catovirus(50.0%)	6	NA	NA
WP_001793242.1|1973475_1974456_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
WP_001789407.1|1974525_1974648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000183771.1|1974791_1975568_-	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA	NA
WP_000414629.1|1975779_1976406_-	MFS transporter	NA	NA	NA	NA	NA
WP_001015545.1|1976601_1977366_-	bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI	NA	NA	NA	NA	NA
WP_001223713.1|1977369_1978572_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	3.9e-09
>prophage 153
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	1986838	1991048	2870100		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570808.1|1986838_1987819_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
WP_001045111.1|1988049_1989042_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924990.1|1989057_1990053_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136633.1|1990049_1991048_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.8	5.2e-15
>prophage 154
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2019932	2080058	2870100	tRNA,transposase,integrase	Staphylococcus_phage(36.36%)	55	2022878:2022895	2065241:2065258
WP_001822528.1|2019932_2020865_+|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_001790237.1|2021162_2021264_+	universal stress protein	NA	NA	NA	NA	NA
WP_001033018.1|2021530_2022724_-	type II sulfide:quinone oxidoreductase Sqr	NA	NA	NA	NA	NA
WP_000465472.1|2022742_2024077_-	persulfide dioxygenase-sulfurtransferase CstB	NA	NA	NA	NA	NA
2022878:2022895	attL	TTTATTAAAAGGAATATT	NA	NA	NA	NA
WP_000816133.1|2024107_2025172_-	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	41.8	7.7e-09
WP_001105088.1|2025308_2025569_+	persulfide-sensing transcriptional repressor CstR	NA	NA	NA	NA	NA
WP_000355845.1|2025568_2026324_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_000700190.1|2027267_2029013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001790000.1|2029159_2029252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001790628.1|2029215_2029350_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160176681.1|2029599_2031108_-	protein kinase	NA	NA	NA	NA	NA
WP_001176969.1|2031222_2031849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000411461.1|2032967_2033864_+	DUF927 domain-containing protein	NA	NA	NA	NA	NA
WP_000626133.1|2033873_2034743_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001193482.1|2035287_2035845_-	K(+)-transporting ATPase subunit C	NA	NA	NA	NA	NA
WP_000852430.1|2035860_2037882_-	K(+)-transporting ATPase subunit B	NA	E4ZFI9	Streptococcus_phage	29.0	6.6e-41
WP_000029431.1|2037900_2039577_-	potassium-transporting ATPase subunit A	NA	NA	NA	NA	NA
WP_000631574.1|2039597_2039678_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_000446429.1|2039844_2042514_+	sensor histidine kinase KdpD	NA	A0A2K9L0Z8	Tupanvirus	21.5	6.0e-10
WP_000858967.1|2042488_2043184_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001060127.1|2046734_2047781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000273824.1|2047973_2048270_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_000195105.1|2048269_2050063_+	DUF927 domain-containing protein	NA	NA	NA	NA	NA
WP_000815646.1|2050296_2051646_+	recombinase family protein	NA	Q9T200	Bacillus_phage	25.1	1.4e-18
WP_001186602.1|2051667_2053296_+	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	31.4	2.4e-46
WP_000859155.1|2053813_2054164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000700853.1|2054250_2054562_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001092169.1|2054579_2055086_+	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_000659050.1|2055106_2055424_+	RadC family protein	NA	NA	NA	NA	NA
WP_000868132.1|2055542_2056628_+|transposase	transposase	transposase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_160176656.1|2056624_2058517_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000361059.1|2058523_2058901_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000067268.1|2059051_2059834_+	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	NA	NA	NA
WP_001072201.1|2059959_2060691_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_001092058.1|2061224_2061887_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_000350222.1|2062225_2062870_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_000220507.1|2062869_2063130_-	persulfide-sensing transcriptional repressor CstR	NA	NA	NA	NA	NA
WP_000438836.1|2063265_2064330_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000465482.1|2064361_2065300_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
2065241:2065258	attR	AATATTCCTTTTAATAAA	NA	NA	NA	NA
WP_001136659.1|2065390_2065696_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010922808.1|2065809_2066940_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_014532405.1|2067273_2067342_+	phenol-soluble modulin PSM-mec	NA	NA	NA	NA	NA
WP_000369214.1|2067426_2067798_-	mecA-type methicillin resistance repressor MecI	NA	NA	NA	NA	NA
WP_000952923.1|2067797_2069555_-	beta-lactam sensor/signal transducer MecR1	NA	NA	NA	NA	NA
WP_001801873.1|2069651_2071661_+	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NA	NA	NA	NA	NA
WP_000872606.1|2071706_2072135_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_000958858.1|2072231_2072975_-	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_001106057.1|2073239_2073914_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
WP_001242578.1|2074390_2074795_-	bleomycin binding protein	NA	NA	NA	NA	NA
WP_001795128.1|2075011_2075782_-	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NA	NA	NA	NA	NA
WP_001106057.1|2075974_2076649_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
WP_000119405.1|2076802_2078065_+	Plasmid recombination enzyme type 2	NA	NA	NA	NA	NA
WP_000336290.1|2078309_2079083_+	protein rep	NA	NA	NA	NA	NA
WP_001817892.1|2079095_2079293_+	protein rep	NA	A0A286QS97	Streptococcus_phage	62.0	1.2e-08
WP_001106057.1|2079383_2080058_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
>prophage 155
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2085713	2095723	2870100		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|2085713_2086514_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_001104165.1|2086902_2087691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001060140.1|2087691_2089026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160176682.1|2089018_2090845_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|2090857_2091559_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095328.1|2092761_2094045_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	1.8e-68
WP_000375647.1|2094322_2095723_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 156
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2102413	2111459	2870100	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884332.1|2102413_2103700_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.9	4.5e-88
WP_000177465.1|2104078_2105593_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.4	1.2e-90
WP_000449218.1|2105918_2106731_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819067.1|2106818_2109488_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	4.6e-119
WP_000255578.1|2109524_2111459_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
>prophage 157
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2121559	2128116	2870100		Faecalibacterium_phage(25.0%)	8	NA	NA
WP_000742837.1|2121559_2122399_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|2122849_2123203_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779134.1|2123270_2123666_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054128.1|2123925_2124495_+	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|2124612_2124813_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
WP_000672033.1|2125204_2125396_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA	NA
WP_000143647.1|2125487_2127368_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA	NA
WP_000154162.1|2127357_2128116_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 158
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2142369	2144082	2870100		Planktothrix_phage(100.0%)	1	NA	NA
WP_000138654.1|2142369_2144082_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.4e-20
>prophage 159
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2149710	2150724	2870100		Faustovirus(100.0%)	1	NA	NA
WP_000639184.1|2149710_2150724_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	25.9	9.6e-09
>prophage 160
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2163063	2163756	2870100		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185863.1|2163063_2163756_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	2.2e-28
>prophage 161
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2189854	2191714	2870100		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125628.1|2189854_2191714_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 162
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2217397	2219148	2870100		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_000143425.1|2217397_2218285_+	sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
WP_000923760.1|2218392_2219148_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
>prophage 163
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2222568	2223066	2870100		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|2222568_2223066_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 164
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2228060	2230444	2870100		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071729.1|2228060_2229911_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	9.3e-236
WP_000173331.1|2229907_2230444_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.0	3.9e-41
>prophage 165
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2235322	2245436	2870100	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000066521.1|2235322_2237032_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
WP_000011688.1|2237309_2237522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001028775.1|2237801_2238245_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_001172341.1|2238438_2240037_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	5.3e-78
WP_001791980.1|2240096_2240426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130051.1|2240721_2242218_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031409.1|2242411_2243302_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001237629.1|2243424_2243841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030072.1|2244098_2245436_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.0e-18
>prophage 166
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2275769	2279558	2870100		Staphylococcus_phage(50.0%)	2	NA	NA
WP_000751263.1|2275769_2276471_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	5.2e-38
WP_000379821.1|2277746_2279558_+	O-acetyltransferase OatA	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
>prophage 167
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2287992	2292107	2870100		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_000161369.1|2287992_2288991_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	1.0e-34
WP_000076661.1|2289081_2289288_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024139.1|2289698_2292107_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.8	3.2e-127
>prophage 168
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2301348	2304384	2870100	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001058993.1|2301348_2303454_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
WP_000455988.1|2303862_2304384_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
>prophage 169
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2310810	2317194	2870100		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062663.1|2310810_2312550_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	6.0e-35
WP_000473679.1|2312850_2314917_+	PTS glucoside EIICBA component	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206031.1|2315296_2315707_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240663.1|2315748_2316105_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228167.1|2316225_2317194_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	4.0e-12
>prophage 170
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2326483	2327476	2870100		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161545.1|2326483_2327476_-	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	32.7	3.7e-37
>prophage 171
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2336754	2337450	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000538625.1|2336754_2337450_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	3.0e-38
>prophage 172
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2356200	2357067	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000721336.1|2356200_2357067_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	1.3e-78
>prophage 173
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2365252	2370448	2870100		Streptococcus_phage(50.0%)	3	NA	NA
WP_075339662.1|2365252_2367061_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.3	6.6e-93
WP_000755946.1|2367192_2367585_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000088733.1|2367586_2370448_+	DUF3427 domain-containing protein	NA	Q5YA94	Bacillus_phage	27.9	3.1e-28
>prophage 174
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2378290	2378986	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000217456.1|2378290_2378986_+	oxidoreductase	NA	W8CYX9	Bacillus_phage	35.6	4.3e-08
>prophage 175
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2383540	2384359	2870100		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824948.1|2383540_2384359_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	27.2	1.3e-08
>prophage 176
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2392411	2393969	2870100		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173871.1|2392411_2393227_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	8.8e-13
WP_000598772.1|2393219_2393969_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	9.0e-20
>prophage 177
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2401240	2405669	2870100		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_000923526.1|2401240_2401903_+	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.8	5.5e-21
WP_160176686.1|2401895_2402672_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000026189.1|2403067_2404255_+	DHA family class C beta-lactamase	NA	NA	NA	NA	NA
WP_000700925.1|2404316_2405669_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
>prophage 178
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2409063	2410922	2870100		Mycoplasma_phage(50.0%)	2	NA	NA
WP_000948974.1|2409063_2410290_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
WP_000569120.1|2410286_2410922_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	9.0e-05
>prophage 179
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2428649	2434911	2870100		Bacillus_phage(66.67%)	5	NA	NA
WP_001176863.1|2428649_2429792_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
WP_000779360.1|2430059_2430446_+	GtrA family protein	NA	NA	NA	NA	NA
WP_000482652.1|2430579_2430687_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001064825.1|2431389_2433153_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	2.5e-36
WP_000486487.1|2433177_2434911_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
>prophage 180
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2438372	2444143	2870100		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000971550.1|2438372_2439488_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	1.6e-20
WP_000286875.1|2439498_2440191_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200956.1|2440201_2440669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000783428.1|2440720_2441698_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000916704.1|2441699_2442647_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.5	3.2e-139
WP_000594519.1|2443213_2444143_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
>prophage 181
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2452009	2452741	2870100		Bacillus_virus(100.0%)	1	NA	NA
WP_000615461.1|2452009_2452741_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.1e-25
>prophage 182
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2469390	2470950	2870100		Escherichia_phage(100.0%)	1	NA	NA
WP_000692648.1|2469390_2470950_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 183
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2492278	2493313	2870100		Bacillus_virus(100.0%)	1	NA	NA
WP_000655971.1|2492278_2493313_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 184
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2503158	2507055	2870100		Hokovirus(33.33%)	4	NA	NA
WP_000477338.1|2503158_2504532_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	2.3e-13
WP_000249497.1|2504524_2505199_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_000761395.1|2505334_2506390_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229920.1|2506389_2507055_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.6e-36
>prophage 185
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2510791	2512000	2870100		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|2510791_2512000_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 186
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2524090	2524990	2870100		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524830.1|2524090_2524990_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.7	1.2e-15
>prophage 187
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2532362	2532782	2870100		Bacillus_phage(100.0%)	1	NA	NA
WP_000920239.1|2532362_2532782_-	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.9	2.6e-37
>prophage 188
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2538474	2539356	2870100		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000235289.1|2538474_2539356_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	3.8e-62
>prophage 189
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2547234	2547870	2870100		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|2547234_2547870_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 190
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2560813	2564793	2870100		Staphylococcus_phage(50.0%)	4	NA	NA
WP_011447058.1|2560813_2561452_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JQU5	Staphylococcus_phage	48.1	2.6e-36
WP_000684147.1|2561762_2562887_+	NAD(P)-binding protein	NA	A0A2K9L3K5	Tupanvirus	22.8	9.3e-13
WP_000417018.1|2562978_2563932_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	6.4e-31
WP_000737705.1|2564292_2564793_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 191
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2568710	2569514	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717381.1|2568710_2569514_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.3e-07
>prophage 192
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2588495	2589101	2870100		Pithovirus(100.0%)	1	NA	NA
WP_000913024.1|2588495_2589101_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.1	4.3e-12
>prophage 193
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2601071	2604239	2870100		Leptospira_phage(100.0%)	1	NA	NA
WP_000592307.1|2601071_2604239_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	1.1e-61
>prophage 194
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2627922	2629589	2870100		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389658.1|2627922_2628732_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.0	1.7e-19
WP_000155387.1|2628728_2629589_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
>prophage 195
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2638371	2646027	2870100		Enterobacteria_phage(33.33%)	8	NA	NA
WP_000411031.1|2638371_2639388_+	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	29.7	1.0e-18
WP_000655241.1|2639961_2640144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158091158.1|2640115_2640340_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000130149.1|2640637_2642302_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.9	8.0e-45
WP_000186134.1|2642338_2643043_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_000769705.1|2643426_2643852_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000044362.1|2644146_2644962_+	hydrolase	NA	NA	NA	NA	NA
WP_001044441.1|2645172_2646027_+	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	4.9e-06
>prophage 196
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2649409	2651719	2870100		Staphylococcus_phage(50.0%)	4	NA	NA
WP_001015500.1|2649409_2650258_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
WP_000875476.1|2650490_2650694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001791678.1|2650780_2650942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001557494.1|2650978_2651719_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.9	1.5e-14
>prophage 197
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2658039	2659452	2870100		Pandoravirus(100.0%)	1	NA	NA
WP_000169224.1|2658039_2659452_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	3.0e-48
>prophage 198
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2663415	2664978	2870100		Vibrio_phage(100.0%)	1	NA	NA
WP_000792342.1|2663415_2664978_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.2e-18
>prophage 199
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2675180	2676149	2870100		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989088.1|2675180_2676149_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 200
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2693601	2694510	2870100		Klosneuvirus(100.0%)	1	NA	NA
WP_000167867.1|2693601_2694510_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 201
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2698101	2705547	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001048259.1|2698101_2705547_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	31.5	3.9e-22
>prophage 202
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2711803	2714623	2870100		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334463.1|2711803_2713609_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.8	5.2e-98
WP_000908182.1|2713840_2714623_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	3.3e-09
>prophage 203
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2725803	2729634	2870100		Clostridium_phage(50.0%)	4	NA	NA
WP_000070866.1|2725803_2726247_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|2726367_2727078_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_001083318.1|2727391_2728054_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242311.1|2728332_2729634_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	3.6e-133
>prophage 204
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2737574	2739185	2870100		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|2737574_2739185_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 205
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2746988	2754738	2870100		Bacillus_virus(25.0%)	9	NA	NA
WP_000273358.1|2746988_2747588_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
WP_000460242.1|2747588_2748665_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248732.1|2748651_2749488_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_015445903.1|2749520_2750618_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.3	2.3e-40
WP_000697334.1|2750614_2751034_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654184.1|2751140_2751665_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|2751691_2752930_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|2752957_2753587_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723418.1|2753610_2754738_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
>prophage 206
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2765142	2765538	2870100		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|2765142_2765538_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 207
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2771809	2772457	2870100		Moumouvirus(100.0%)	1	NA	NA
WP_001187630.1|2771809_2772457_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.0	8.0e-09
>prophage 208
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2779657	2781178	2870100		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|2779657_2781178_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 209
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2788368	2790396	2870100		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546611.1|2788368_2790396_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.5	2.3e-25
>prophage 210
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2795545	2798929	2870100		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2795545_2795908_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_000390827.1|2796256_2797258_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2797376_2797703_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190829.1|2797704_2798184_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041111.1|2798158_2798929_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	2.2e-21
>prophage 211
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2813047	2817771	2870100		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094583.1|2813047_2814577_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_072399972.1|2814606_2815626_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2815747_2816002_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047811.1|2816001_2817771_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.6	7.0e-63
>prophage 212
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2821531	2835592	2870100	tRNA	Moraxella_phage(16.67%)	12	NA	NA
WP_000159042.1|2821531_2822557_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.6	3.4e-62
WP_000106332.1|2822871_2824482_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	28.1	1.9e-19
WP_001792272.1|2824570_2824699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602057.1|2824843_2826772_-	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.2	9.3e-53
WP_001283612.1|2827024_2827660_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_072414299.1|2828014_2829043_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581076.1|2829102_2829327_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052270.1|2829534_2830785_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000790331.1|2830967_2831918_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_000141432.1|2832066_2833551_+	glycoside hydrolase family 32 protein	NA	S6ATV4	Bacillus_phage	26.5	2.3e-19
WP_001253312.1|2833547_2834507_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000688492.1|2834875_2835592_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 213
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2842773	2844750	2870100		uncultured_virus(100.0%)	2	NA	NA
WP_000917289.1|2842773_2843058_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240655.1|2843133_2844750_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	2.6e-157
>prophage 214
NZ_CP047856	Staphylococcus aureus strain UP_1435 chromosome, complete genome	2870100	2848699	2869630	2870100	integrase	Staphylococcus_phage(97.22%)	38	2851542:2851556	2861245:2861259
WP_000791411.1|2848699_2849755_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000595392.1|2849776_2850793_+	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
2851542:2851556	attL	CTATCATTATCGAAT	NA	NA	NA	NA
WP_000857180.1|2851911_2852949_-|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	98.6	1.4e-175
WP_000427213.1|2853011_2853254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001558608.1|2853264_2854248_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000694772.1|2854347_2854530_-	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	100.0	6.9e-27
WP_000591749.1|2854733_2855075_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000759682.1|2855080_2856013_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
WP_001031454.1|2856028_2856742_-	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_000854072.1|2856875_2857139_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001025404.1|2857154_2857370_+	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000128909.1|2857358_2857688_-	hypothetical protein	NA	M9NS98	Staphylococcus_phage	98.2	5.1e-52
WP_001148605.1|2857738_2858491_+	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_001148856.1|2858506_2858704_+	hypothetical protein	NA	O80075	Staphylococcus_phage	100.0	2.5e-30
WP_000762521.1|2858690_2859071_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001120201.1|2859125_2859449_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2859445_2859607_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2859701_2860004_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2860008_2860269_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|2860277_2860541_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700554.1|2860549_2862493_+	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
2861245:2861259	attR	ATTCGATAATGATAG	NA	NA	NA	NA
WP_000180600.1|2862494_2863415_+	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	100.0	5.1e-166
WP_064135358.1|2863495_2864113_+	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000934759.1|2864113_2864584_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_160176691.1|2864613_2865507_+	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	99.7	1.6e-140
WP_000338528.1|2865513_2865732_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401969.1|2865740_2866145_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000101279.1|2866157_2866529_+	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
WP_000111491.1|2866528_2866786_+	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000178987.1|2866782_2867031_+	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_001065108.1|2867045_2867291_+	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000185693.1|2867287_2867824_+	hypothetical protein	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001282077.1|2867860_2868106_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
WP_000195784.1|2868102_2868309_+	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_000595265.1|2868305_2868455_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001557462.1|2868454_2868655_+	DUF1514 domain-containing protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000590122.1|2868682_2869099_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988332.1|2869330_2869630_+	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
