The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	0	24287	2747891	holin,protease,portal,head,tail,capsid,terminase	Staphylococcus_phage(100.0%)	29	NA	NA
WP_000625088.1|0_1662_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000025274.1|1677_2865_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000642728.1|2848_3586_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000154559.1|3609_4755_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000238236.1|4774_5059_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5048_5333_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_061684363.1|5316_5679_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	99.2	9.8e-65
WP_000114227.1|5675_6080_+	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	99.3	2.1e-68
WP_000565498.1|6076_6484_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268733.1|6484_7129_+|tail	phage tail protein	tail	A0A1X9H0J2	Staphylococcus_phage	100.0	1.5e-119
WP_071621395.1|7170_7395_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|7444_7795_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_001789580.1|7821_7983_+	hypothetical protein	NA	A0A0H3U330	Staphylococcus_phage	100.0	1.6e-22
WP_001796452.1|8039_12569_+|tail	phage tail tape measure protein	tail	A0A2I6PDK2	Staphylococcus_phage	99.8	0.0e+00
WP_000567408.1|12565_14050_+|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_000582165.1|14065_17851_+	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.5	0.0e+00
WP_001153681.1|17840_17993_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040261.1|18039_18327_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_000539688.1|18384_18681_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|18830_19007_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|19059_19167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|19218_19473_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|19484_20240_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000919350.1|20430_20922_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_020444758.1|21447_21906_+	amidase	NA	R9QTN8	Staphylococcus_phage	98.7	4.9e-85
WP_000727649.1|22000_22450_-	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_000702263.1|23133_23484_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|23536_23797_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|24107_24287_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
>prophage 2
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	30221	32668	2747891		Staphylococcus_phage(100.0%)	3	NA	NA
WP_000991300.1|30221_31118_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000645721.1|31118_31799_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763048.1|31795_32668_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
>prophage 3
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	37915	38317	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000205103.1|37915_38317_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	1.3e-22
>prophage 4
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	42513	44543	2747891		Bacillus_virus(50.0%)	2	NA	NA
WP_000149686.1|42513_43074_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275721.1|43445_44543_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	2.5e-47
>prophage 5
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	48573	50857	2747891		Bacillus_virus(100.0%)	2	NA	NA
WP_000284427.1|48573_50043_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.3	3.2e-106
WP_000164017.1|50035_50857_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	4.4e-68
>prophage 6
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	54544	61311	2747891		Gordonia_phage(33.33%)	5	NA	NA
WP_000572878.1|54544_55840_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|55948_56251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272062.1|56422_57115_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992924.1|57111_59304_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774567.1|59307_61311_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	7.5e-114
>prophage 7
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	68369	73397	2747891		Catovirus(33.33%)	5	NA	NA
WP_001231459.1|68369_69317_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.5e-16
WP_001147862.1|69397_70759_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.8	1.4e-103
WP_000548781.1|70928_71459_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140176.1|71705_72776_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613738.1|72842_73397_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
>prophage 8
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	76849	77263	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001622129.1|76849_77263_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	39.8	5.1e-17
>prophage 9
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	82064	82694	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|82064_82694_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 10
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	98183	99920	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_160190511.1|98183_99920_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.2	4.9e-53
>prophage 11
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	116367	117096	2747891		Planktothrix_phage(100.0%)	1	NA	NA
WP_001144055.1|116367_117096_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
>prophage 12
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	127919	128264	2747891		Streptococcus_phage(100.0%)	1	NA	NA
WP_000290301.1|127919_128264_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
>prophage 13
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	137897	138638	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000216874.1|137897_138638_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
>prophage 14
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	146366	150630	2747891		Staphylococcus_phage(80.0%)	5	NA	NA
WP_010922839.1|146366_147149_+	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_000821652.1|147429_148149_+	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	4.0e-25
WP_000713846.1|148183_148912_+	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	38.6	2.5e-27
WP_000764687.1|149065_149836_+	staphylococcal enterotoxin type C1/U	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.2	1.8e-44
WP_001236362.1|149874_150630_+	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
>prophage 15
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	153882	155012	2747891	transposase	Paenibacillus_phage(100.0%)	1	NA	NA
WP_098686295.1|153882_155012_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.3	5.2e-80
>prophage 16
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	158527	206064	2747891	tRNA,protease,transposase	Staphylococcus_phage(91.67%)	44	NA	NA
WP_098686295.1|158527_159656_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.3	5.2e-80
WP_000627532.1|159858_160200_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	91.2	4.8e-53
WP_000669031.1|160240_160867_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.1	3.9e-85
WP_000070666.1|160942_161938_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.2	1.9e-73
WP_001796416.1|162018_162669_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	70.4	1.3e-30
WP_072468941.1|162971_163427_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	2.3e-79
WP_000348383.1|163585_165064_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	95.1	1.0e-277
WP_000778530.1|165068_166070_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	3.1e-185
WP_000718111.1|166066_166324_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	97.6	1.0e-44
WP_000672013.1|166389_166863_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_001827685.1|166867_167614_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	97.6	6.6e-140
WP_000109912.1|167993_169586_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_000933821.1|169957_171151_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000366165.1|171275_172184_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.7	9.8e-138
WP_000453324.1|172395_173229_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	3.5e-158
WP_000623468.1|173478_173832_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	91.5	2.7e-19
WP_001200545.1|173828_174194_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	6.2e-59
WP_000091443.1|174449_174752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|175010_175724_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000492904.1|176282_176903_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001168913.1|177069_177705_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001030473.1|178001_178445_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	77.9	1.1e-49
WP_001152694.1|178431_178875_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671060.1|178987_179458_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	85.2	3.8e-69
WP_000384171.1|179656_179881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032834.1|180155_181010_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989113.1|181096_182389_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	94.9	3.0e-217
WP_000221174.1|182388_182703_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	96.2	1.8e-51
WP_001261660.1|183345_184848_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_029549219.1|185341_186373_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	1.2e-195
WP_000493880.1|186379_187012_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	97.6	2.1e-110
WP_001159030.1|187022_188204_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_001008551.1|188216_188681_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001196354.1|188802_189804_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_014937042.1|189915_190035_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|190037_190865_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|191435_191837_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764418.1|191953_192517_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	98.4	4.1e-102
WP_000526542.1|192513_193467_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025064.1|193576_194758_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	9.6e-218
WP_001108717.1|195049_197464_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	98.7	0.0e+00
WP_000836464.1|197485_197797_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	97.1	6.9e-51
WP_160190514.1|198121_204679_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	87.3	9.5e-291
WP_000284998.1|204795_206064_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	96.4	1.3e-55
>prophage 17
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	217180	222508	2747891		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091394.1|217180_218038_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	99.3	4.4e-71
WP_001048366.1|218066_218663_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118323.1|218683_222508_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	3.4e-83
>prophage 18
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	231248	232955	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862076.1|231248_232955_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.6	4.7e-274
>prophage 19
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	239560	242191	2747891	protease,tRNA	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186034.1|239560_240823_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	7.9e-85
WP_001279338.1|240916_242191_-|protease	trypsin-like serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 20
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	245959	250094	2747891		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808830.1|245959_247564_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	99.5	3.5e-114
WP_000291426.1|247550_248711_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553931.1|248824_249271_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174269.1|249350_250094_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	29.9	1.4e-17
>prophage 21
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	267868	271066	2747891		Streptomyces_phage(100.0%)	1	NA	NA
WP_000226934.1|267868_271066_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.3	1.1e-135
>prophage 22
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	275999	277757	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232655.1|275999_277757_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	3.3e-41
>prophage 23
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	282641	290805	2747891		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080026.1|282641_283346_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_160190628.1|283345_285007_+	PAS domain-containing protein	NA	W8CYF6	Bacillus_phage	39.0	4.9e-34
WP_000849447.1|285506_286994_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038313.1|287286_289917_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_160190516.1|289932_290805_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	37.4	1.7e-41
>prophage 24
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	294720	305874	2747891	protease,tRNA	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808621.1|294720_295641_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_014937037.1|295733_295856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435132.1|296053_297991_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	7.8e-116
WP_000049154.1|298417_299911_+	amino acid permease	NA	NA	NA	NA	NA
WP_001807711.1|300139_300667_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.8	2.4e-11
WP_001125540.1|300695_300896_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|300942_301299_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032657.1|301440_302049_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001280025.1|302067_302997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|303001_303112_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127572.1|303159_304461_+	trigger factor	NA	NA	NA	NA	NA
WP_000472293.1|304611_305874_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	61.7	1.1e-139
>prophage 25
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	315442	318073	2747891	tRNA	Catovirus(100.0%)	1	NA	NA
WP_000425356.1|315442_318073_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.4	2.8e-153
>prophage 26
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	328006	363614	2747891	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_001005764.1|328006_329011_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019180.1|329012_330038_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|330060_331200_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|331218_331479_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|331753_334033_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000594987.1|334236_336510_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	7.3e-65
WP_000364543.1|336531_337050_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.8	2.1e-28
WP_160190518.1|337478_339668_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869979.1|339679_340132_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717800.1|340128_341004_+	cell wall amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|341464_342727_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044803.1|342742_344509_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	26.9	4.9e-16
WP_001827648.1|344840_344969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682645.1|344968_345742_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102740.1|345902_347177_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.8e-105
WP_000704122.1|347261_347684_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|347783_347966_+	CsbD family protein	NA	NA	NA	NA	NA
WP_160190519.1|348005_348152_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985881.1|348388_349402_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409161.1|349713_350856_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.3	6.3e-33
WP_000066103.1|350856_351975_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567023.1|352663_353332_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283324.1|353333_355811_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000734073.1|356153_358784_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|358846_359107_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|359110_359539_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|359553_359862_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342266.1|360146_360785_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	1.6e-09
WP_160190520.1|360787_361711_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|361722_362991_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|362990_363614_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 27
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	370291	372679	2747891		Lactococcus_phage(50.0%)	2	NA	NA
WP_000542326.1|370291_371512_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	34.6	8.5e-52
WP_160190522.1|371926_372679_+	exotoxin	NA	A0EX09	Staphylococcus_phage	40.9	3.2e-49
>prophage 28
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	379948	386112	2747891		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|379948_380410_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_160190629.1|380468_382616_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.8	3.5e-32
WP_160190523.1|382672_383647_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|383691_383943_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_000368338.1|384288_386112_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 29
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	389546	392654	2747891		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_160190524.1|389546_391379_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.4	2.2e-136
WP_001119019.1|391514_392654_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.0	3.0e-27
>prophage 30
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	399123	400071	2747891		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|399123_400071_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 31
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	403125	416853	2747891	tRNA	Klosneuvirus(25.0%)	13	NA	NA
WP_001030077.1|403125_404517_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.5	1.6e-46
WP_072468919.1|404851_405475_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411298.1|405485_406304_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217237.1|406364_408164_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	1.3e-53
WP_001283055.1|408387_409494_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624564.1|409624_410302_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683915.1|410304_411405_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	3.0e-08
WP_001062177.1|411518_412865_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000924214.1|412874_413765_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001213908.1|413890_414676_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_031875121.1|414717_415581_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095258.1|415567_415978_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|416253_416853_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 32
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	423026	423650	2747891		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223009.1|423026_423650_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	2.1e-30
>prophage 33
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	429194	432006	2747891		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019698.1|429194_430541_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.4	5.3e-63
WP_160190528.1|430533_432006_+	glycine dehydrogenase subunit 2	NA	E3SN07	Prochlorococcus_phage	41.1	1.8e-80
>prophage 34
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	439505	446075	2747891		Indivirus(66.67%)	6	NA	NA
WP_001286934.1|439505_440843_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.2e-43
WP_000159865.1|440835_441066_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183379.1|441043_441925_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.2	1.5e-10
WP_001124985.1|442355_442808_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942206.1|442823_444503_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291530.1|444653_446075_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.7	5.1e-40
>prophage 35
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	452902	454309	2747891		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|452902_454309_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 36
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	458955	460440	2747891		Cyanophage(100.0%)	1	NA	NA
WP_000105075.1|458955_460440_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 37
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	466104	480530	2747891		Bacillus_phage(28.57%)	14	NA	NA
WP_000447733.1|466104_466992_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183432.1|467069_467576_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273372.1|467667_468399_+	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368647.1|468391_468934_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159580.1|468926_469664_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064074.1|469796_470522_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	6.0e-45
WP_160190530.1|470502_472254_+	cell wall metabolism sensor histidine kinase WalK	NA	A0A1V0SGX0	Hokovirus	32.9	5.0e-21
WP_001622322.1|472505_473435_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_160190531.1|473427_475590_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	53.5	7.0e-49
WP_000476856.1|475680_476595_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001186906.1|477200_477746_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001151999.1|477851_478100_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	6.4e-15
WP_001163808.1|478207_479161_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000902118.1|479150_480530_+	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
>prophage 38
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	489954	495444	2747891		Bacillus_phage(25.0%)	7	NA	NA
WP_001043863.1|489954_490227_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450565.1|490657_491230_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774683.1|491232_491958_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001827577.1|491974_492919_+	heptaprenyl diphosphate synthase subunit II	NA	A0A1V0SE37	Indivirus	24.0	2.1e-10
WP_000442481.1|493010_493460_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	5.4e-28
WP_000789524.1|493669_493870_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269939.1|494277_495444_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.3	2.6e-34
>prophage 39
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	499106	499682	2747891		Bacillus_virus(100.0%)	1	NA	NA
WP_000005212.1|499106_499682_+	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
>prophage 40
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	503068	510575	2747891	tRNA	unidentified_phage(25.0%)	5	NA	NA
WP_000361547.1|503068_504271_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	1.9e-35
WP_000049921.1|504257_505229_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525057.1|505252_507946_+	ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858795.1|508267_509560_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	4.3e-54
WP_000362215.1|509888_510575_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	31.4	1.2e-07
>prophage 41
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	514266	514893	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_001108885.1|514266_514893_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.7e-24
>prophage 42
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	524217	525096	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_001133028.1|524217_525096_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.1e-19
>prophage 43
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	563480	572869	2747891		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282160.1|563480_564185_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_001795441.1|564429_564624_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_001165814.1|564635_564887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160190535.1|564923_566048_+	virulence factor	NA	NA	NA	NA	NA
WP_000995282.1|566063_566501_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934885.1|566924_567881_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175742.1|568080_568560_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.2	4.5e-73
WP_000166049.1|568574_569414_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	76.5	3.0e-48
WP_000159902.1|569499_570033_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913317.1|570025_570454_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473654.1|570465_570966_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|570965_571187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342148.1|571378_572869_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.3e-22
>prophage 44
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	576278	578290	2747891		Bacillus_phage(50.0%)	2	NA	NA
WP_000192137.1|576278_576938_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166793.1|576934_578290_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 45
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	585959	586751	2747891		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|585959_586751_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 46
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	590284	595895	2747891	lysis,protease	Lactobacillus_phage(33.33%)	8	NA	NA
WP_000138414.1|590284_591421_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.0	2.2e-33
WP_001796534.1|591452_592082_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	lysis	NA	NA	NA	NA
WP_001215908.1|592100_592370_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|592532_592841_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|593011_593212_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876215.1|593408_593810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000275771.1|593934_594552_+|protease	protease	protease	NA	NA	NA	NA
WP_000216938.1|594629_595895_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.5	9.5e-14
>prophage 47
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	603738	605340	2747891		Klosneuvirus(100.0%)	1	NA	NA
WP_000942303.1|603738_605340_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 48
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	609765	617359	2747891		Indivirus(25.0%)	8	NA	NA
WP_000194851.1|609765_610617_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.2	2.6e-15
WP_000974853.1|610623_611265_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077577.1|611404_613219_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.0	1.1e-153
WP_000171798.1|613423_613768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000469973.1|614095_615082_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000946381.1|615074_615905_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000052306.1|615891_616665_+	ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	25.7	2.2e-05
WP_000571261.1|616657_617359_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	9.0e-14
>prophage 49
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	624853	627208	2747891		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000153718.1|624853_625636_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	36.3	1.3e-26
WP_000173848.1|625637_626636_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.6	3.8e-34
WP_000604801.1|626641_627208_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	31.8	5.0e-23
>prophage 50
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	631527	632790	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_000283026.1|631527_632790_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.6	2.6e-96
>prophage 51
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	642448	646842	2747891		Bacillus_phage(50.0%)	2	NA	NA
WP_001289594.1|642448_644851_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.1	5.1e-93
WP_025173910.1|644850_646842_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	1.0e-115
>prophage 52
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	652465	654112	2747891		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|652465_654112_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 53
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	657781	658903	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691306.1|657781_658903_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 54
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	663052	668707	2747891		Phage_Wrath(25.0%)	7	NA	NA
WP_001208755.1|663052_663676_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	5.9e-17
WP_000380739.1|664055_664919_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	9.1e-16
WP_001791425.1|664992_665097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000688134.1|665093_666071_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.4	2.3e-185
WP_001085655.1|666227_666497_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|666949_667099_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000082546.1|667189_668707_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	1.8e-91
>prophage 55
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	678843	683119	2747891		Bacillus_phage(50.0%)	6	NA	NA
WP_000841351.1|678843_679377_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027140.1|679515_679704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000623460.1|679816_680419_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670290.1|680415_681507_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_160190540.1|681510_682242_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_001796717.1|682216_683119_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.8	3.7e-20
>prophage 56
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	687931	702389	2747891	portal,integrase,head,terminase	Staphylococcus_phage(57.14%)	23	685079:685096	708550:708567
685079:685096	attL	ATTCAATCATTAATATAT	NA	NA	NA	NA
WP_078064715.1|687931_688873_-|head	head morphogenesis protein	head	Q4ZE35	Staphylococcus_virus	70.4	5.0e-52
WP_000158569.1|689402_690851_-|portal	phage portal protein	portal	Q4ZE36	Staphylococcus_virus	69.6	1.9e-196
WP_000207539.1|690863_692138_-|terminase	PBSX family phage terminase large subunit	terminase	Q4ZE37	Staphylococcus_virus	76.4	1.2e-194
WP_000090969.1|692124_692553_-	helix-turn-helix domain-containing protein	NA	A1EAE0	Streptococcus_phage	45.1	1.1e-25
WP_000653928.1|692704_693193_-	hypothetical protein	NA	R9TMH4	Paenibacillus_phage	27.7	1.9e-07
WP_000835356.1|693469_693934_-	hypothetical protein	NA	C9E2P0	Enterococcus_phage	43.7	2.5e-20
WP_025174108.1|693930_694038_-	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	84.4	1.4e-06
WP_000185174.1|694179_694710_-	nucleotide pyrophosphohydrolase	NA	A0A1P8VVP1	Streptococcus_phage	39.1	8.0e-23
WP_000714365.1|695018_695177_-	hypothetical protein	NA	A0A0E3T9L7	Staphylococcus_phage	90.4	7.9e-19
WP_000945229.1|695191_695482_-	hypothetical protein	NA	A0A223LIA9	Staphylococcus_phage	58.1	5.5e-18
WP_000929467.1|695482_696421_-	DnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	48.1	4.8e-47
WP_076679818.1|696434_696929_-	single-stranded DNA-binding protein	NA	A7TWM8	Staphylococcus_phage	94.0	9.9e-84
WP_000818736.1|697009_697789_-	ATP-binding protein	NA	A0A1W6JPW0	Staphylococcus_phage	88.8	9.3e-129
WP_001004328.1|697789_698326_-	hypothetical protein	NA	A0A0H3U480	Staphylococcus_phage	81.4	1.1e-75
WP_000786635.1|698330_698597_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.9e-18
WP_000786995.1|698586_698904_-	DUF2482 family protein	NA	W5RAK4	Staphylococcus_phage	80.6	1.6e-39
WP_000072840.1|698990_699152_-	DUF1270 family protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
WP_000789021.1|699322_699604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000842950.1|699628_699865_-	DUF739 family protein	NA	A0A2I6PDH8	Staphylococcus_phage	82.4	7.4e-29
WP_001083979.1|700026_700392_+	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	47.9	1.8e-21
WP_000554409.1|700538_700922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001183752.1|700933_701629_+	hypothetical protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	50.9	1.4e-06
WP_000146714.1|701681_702389_+|integrase	tyrosine-type recombinase/integrase	integrase	V9QKF1	Oenococcus_phage	26.2	4.7e-10
708550:708567	attR	ATATATTAATGATTGAAT	NA	NA	NA	NA
>prophage 57
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	707006	707483	2747891		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448081.1|707006_707483_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	2.7e-22
>prophage 58
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	713426	719908	2747891		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103747.1|713426_714245_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	3.1e-26
WP_001072707.1|714719_715262_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516248.1|715267_717277_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.5	3.1e-59
WP_000073337.1|717289_719908_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.5	8.5e-41
>prophage 59
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	729322	730366	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|729322_730366_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 60
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	734566	740110	2747891		Bacillus_virus(33.33%)	4	NA	NA
WP_000664766.1|734566_735853_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	27.9	6.7e-15
WP_000089944.1|735852_737118_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	2.0e-40
WP_001293306.1|737148_737862_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_072468899.1|737866_740110_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	9.1e-84
>prophage 61
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	745248	757063	2747891	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|745248_746220_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282307.1|746234_747152_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_108627736.1|747321_747672_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043642.1|748058_750176_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_160190543.1|750168_750498_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|750494_750779_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097463.1|750799_751975_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036631.1|751995_752463_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_078064710.1|752752_757063_-	PolC-type DNA polymerase III	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 62
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	761336	762107	2747891		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473705.1|761336_762107_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 63
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	766880	780553	2747891	tRNA,protease	Erwinia_phage(16.67%)	11	NA	NA
WP_000379054.1|766880_768284_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	4.9e-27
WP_000072681.1|768349_768895_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015604.1|768891_769788_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	4.6e-31
WP_000195251.1|770205_771513_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001622395.1|771668_773744_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	2.3e-105
WP_160190545.1|773917_774790_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_160190546.1|774961_776206_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041653.1|776233_777352_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	1.2e-49
WP_033858250.1|777580_778489_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.9e-17
WP_001020801.1|778510_779677_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176404.1|779785_780553_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 64
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	793936	795993	2747891		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|793936_794668_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|794782_795016_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|795258_795993_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 65
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	806363	808358	2747891		Moumouvirus(100.0%)	1	NA	NA
WP_000579546.1|806363_808358_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 66
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	811505	812441	2747891	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161292.1|811505_812441_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 67
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	817445	819702	2747891		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_160190549.1|817445_818645_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	9.2e-43
WP_000933956.1|818860_819079_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368225.1|819078_819702_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	6.1e-22
>prophage 68
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	823068	823680	2747891		Pandoravirus(100.0%)	1	NA	NA
WP_001040247.1|823068_823680_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	2.1e-27
>prophage 69
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	827647	832258	2747891		Halovirus(33.33%)	4	NA	NA
WP_001190913.1|827647_828748_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_000767035.1|828749_830024_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016170.1|830041_830923_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	6.0e-31
WP_001178613.1|830950_832258_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 70
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	836191	838945	2747891	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000384703.1|836191_838945_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	28.0	4.7e-90
>prophage 71
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	858514	858703	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245799.1|858514_858703_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	85.2	8.5e-20
>prophage 72
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	867587	871632	2747891		Staphylococcus_phage(66.67%)	6	NA	NA
WP_000192697.1|867587_867800_-	hypothetical protein	NA	Q4ZBW5	Staphylococcus_virus	69.2	8.1e-19
WP_000765705.1|867783_867930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000857478.1|868597_869557_+	beta-channel forming cytolysin	NA	A0A2H4PQH7	Staphylococcus_phage	30.6	3.3e-35
WP_000231332.1|870010_870244_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032820.1|870852_871038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000669539.1|871281_871632_-	complement inhibitor SCIN family protein	NA	A7TWS0	Staphylococcus_phage	51.8	6.4e-21
>prophage 73
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	883104	887662	2747891		Staphylococcus_phage(33.33%)	3	NA	NA
WP_001018928.1|883104_883419_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249279.1|883591_885940_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.3	8.5e-16
WP_000161953.1|885949_887662_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	1.8e-15
>prophage 74
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	892675	893734	2747891	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003566.1|892675_893734_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
>prophage 75
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	905678	908575	2747891		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_000401377.1|905678_906161_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263798.1|906162_906705_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814568.1|906774_907164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|907166_907421_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757595.1|907645_908575_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	1.3e-12
>prophage 76
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	920093	921941	2747891		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|920093_921941_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 77
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	930075	933716	2747891		Mycoplasma_phage(50.0%)	4	NA	NA
WP_000433547.1|930075_931170_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.8e-37
WP_001020625.1|931182_931722_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455589.1|931865_932141_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|932309_933716_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
>prophage 78
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	938358	938910	2747891		Synechococcus_phage(100.0%)	1	NA	NA
WP_000957036.1|938358_938910_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.2	1.6e-13
>prophage 79
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	945086	949465	2747891		Bacillus_virus(50.0%)	5	NA	NA
WP_001289619.1|945086_945320_+	glutaredoxin family protein	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040046.1|945555_947274_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|947276_947543_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505969.1|947696_948239_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000685080.1|948292_949465_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.6	2.0e-74
>prophage 80
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	952581	967342	2747891		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921979.1|952581_953982_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	29.2	2.0e-12
WP_000273264.1|953974_954781_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_160190554.1|955046_956294_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709286.1|956315_957794_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	1.9e-77
WP_000238657.1|957808_958375_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.6	8.0e-29
WP_000030827.1|958377_959406_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	1.2e-62
WP_000483713.1|959398_960883_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000032752.1|960861_963051_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000666803.1|963043_963715_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|963716_963980_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174048.1|963979_964684_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.2	4.0e-46
WP_001010404.1|964687_965812_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_001622461.1|965798_966281_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_000225844.1|966481_967342_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.8	2.0e-39
>prophage 81
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	977834	981599	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074512.1|977834_981599_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	8.7e-55
>prophage 82
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	985251	986253	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000676571.1|985251_986253_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	31.7	1.1e-15
>prophage 83
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	994558	998084	2747891		Enterococcus_phage(50.0%)	6	NA	NA
WP_001796516.1|994558_994849_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	38.0	3.4e-07
WP_001794249.1|994912_995044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081317.1|995090_996050_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766009.1|996541_996898_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001796515.1|997064_997355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571169.1|997442_998084_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	3.8e-19
>prophage 84
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1008224	1013435	2747891	protease	Pithovirus(33.33%)	3	NA	NA
WP_001796514.1|1008224_1010549_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_000928413.1|1010767_1011571_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001049954.1|1011872_1013435_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.3e-36
>prophage 85
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1032361	1034170	2747891		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082725.1|1032361_1034170_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
>prophage 86
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1039984	1041954	2747891		Bacillus_virus(100.0%)	2	NA	NA
WP_000427779.1|1039984_1040965_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.1	2.7e-16
WP_001067039.1|1040967_1041954_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.8e-15
>prophage 87
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1045605	1047619	2747891		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_001258350.1|1045605_1046547_-	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	2.1e-05
WP_000140054.1|1046536_1047619_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	2.9e-19
>prophage 88
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1055551	1060178	2747891		Agrobacterium_phage(50.0%)	2	NA	NA
WP_000353969.1|1055551_1058161_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001044231.1|1058363_1060178_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
>prophage 89
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1065468	1069122	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_000154909.1|1065468_1069122_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.7	3.5e-24
>prophage 90
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1079877	1086981	2747891		Staphylococcus_phage(33.33%)	6	NA	NA
WP_160190562.1|1079877_1080807_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	3.7e-39
WP_000138487.1|1081255_1082500_-	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_000167314.1|1082608_1083799_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000838022.1|1084106_1085234_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1085594_1085972_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035064.1|1086387_1086981_-	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.5e-25
>prophage 91
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1096915	1100543	2747891		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009695.1|1096915_1098391_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	36.7	1.2e-47
WP_000046076.1|1098521_1099730_-	NADH dehydrogenase	NA	NA	NA	NA	NA
WP_001143497.1|1100183_1100543_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.1e-14
>prophage 92
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1104587	1107256	2747891		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1104587_1105802_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129643.1|1105798_1107256_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.5	8.9e-40
>prophage 93
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1118720	1167103	2747891	holin,plate,portal,capsid,tail,integrase,head,terminase	Staphylococcus_phage(71.88%)	68	1114185:1114201	1167145:1167161
1114185:1114201	attL	TTAAAATAATTTTAATT	NA	NA	NA	NA
WP_000971220.1|1118720_1119176_-	hypothetical protein	NA	B7T0L3	Staphylococcus_virus	100.0	2.7e-72
WP_000448197.1|1119172_1119760_-	hypothetical protein	NA	Q4ZBG7	Staphylococcus_virus	100.0	5.4e-97
WP_107396525.1|1120149_1121595_-	CHAP domain-containing protein	NA	A0A0H3U310	Staphylococcus_phage	98.5	2.9e-293
WP_038805694.1|1121575_1122013_-|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	99.3	2.9e-71
WP_000398860.1|1122068_1122464_-	hypothetical protein	NA	Q8SDS9	Staphylococcus_phage	100.0	1.6e-68
WP_107396524.1|1122469_1123642_-|plate	BppU family phage baseplate upper protein	plate	B2ZZ03	Staphylococcus_phage	99.0	1.7e-195
WP_107396523.1|1123654_1125553_-	CHAP domain-containing protein	NA	B2ZZ02	Staphylococcus_phage	99.1	0.0e+00
WP_000466777.1|1125689_1125989_-	DUF2951 domain-containing protein	NA	A0A0F6N3M6	Staphylococcus_phage	100.0	9.9e-47
WP_015990323.1|1126029_1126203_-	XkdX family protein	NA	B2ZZ00	Staphylococcus_phage	100.0	1.0e-27
WP_061713858.1|1126212_1126590_-	DUF2977 domain-containing protein	NA	A0A2H4PQW4	Staphylococcus_phage	99.2	1.2e-60
WP_156979385.1|1126589_1128413_-|plate	BppU family phage baseplate upper protein	plate	A9CRC5	Staphylococcus_phage	99.7	0.0e+00
WP_107396521.1|1128412_1130323_-	hypothetical protein	NA	I1W633	Staphylococcus_phage	99.2	0.0e+00
WP_001657243.1|1130337_1132239_-	hypothetical protein	NA	I1W634	Staphylococcus_phage	100.0	0.0e+00
WP_000350682.1|1132247_1133195_-|tail	phage tail family protein	tail	Q8SDT6	Staphylococcus_phage	99.4	2.3e-182
WP_107396520.1|1133207_1136675_-	hypothetical protein	NA	Q4ZDU6	Staphylococcus_virus	97.5	1.8e-272
WP_000105584.1|1136691_1137036_-	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_001100163.1|1137065_1137431_-	hypothetical protein	NA	Q8SDT9	Staphylococcus_phage	100.0	2.8e-59
WP_000002583.1|1137492_1138074_-|tail	phage major tail protein, TP901-1 family	tail	Q8SDU0	Staphylococcus_phage	100.0	4.9e-106
WP_015990319.1|1138092_1138476_-	hypothetical protein	NA	B2ZYZ0	Staphylococcus_phage	100.0	2.6e-68
WP_001017815.1|1138487_1138835_-	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_031793847.1|1138834_1139137_-	hypothetical protein	NA	A4ZFB6	Staphylococcus_virus	99.0	3.3e-50
WP_000208960.1|1139133_1139466_-|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001114085.1|1139474_1139762_-	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	100.0	4.7e-46
WP_031866019.1|1139783_1140758_-|capsid	phage major capsid protein	capsid	E0Y3L0	Staphylococcus_virus	99.7	6.3e-183
WP_000354305.1|1140771_1141386_-	DUF4355 domain-containing protein	NA	I1W646	Staphylococcus_phage	100.0	2.9e-40
WP_001824752.1|1141517_1141691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160190564.1|1141763_1142759_-|head	phage head morphogenesis protein	head	E0Y3K7	Staphylococcus_virus	97.6	2.7e-181
WP_108703175.1|1142765_1144301_-|portal	phage portal protein	portal	A1KX25	Staphylococcus_virus	98.8	2.7e-289
WP_108703174.1|1144311_1145589_-|terminase	PBSX family phage terminase large subunit	terminase	A0EWS5	Staphylococcus_virus	98.8	8.1e-247
WP_001003271.1|1145575_1146016_-|terminase	terminase small subunit	terminase	I1W650	Staphylococcus_phage	100.0	4.8e-74
WP_103147030.1|1146202_1146625_-	RinA family phage transcriptional activator	NA	S4V7K2	Staphylococcus_phage	99.3	6.1e-74
WP_000990005.1|1146648_1146795_-	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	2.2e-15
WP_103246442.1|1146795_1146969_-	transcriptional regulator	NA	A0A0E3TAH3	Staphylococcus_phage	98.2	4.9e-22
WP_000592207.1|1146965_1147352_-	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000195803.1|1147348_1147555_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_058342507.1|1147591_1148122_-	dUTPase	NA	B2ZYX2	Staphylococcus_phage	99.4	1.2e-95
WP_160190565.1|1148114_1148285_-	hypothetical protein	NA	A7TWH6	Staphylococcus_phage	91.1	5.9e-20
WP_058342509.1|1148289_1148526_-	DUF1024 family protein	NA	A1KX83	Staphylococcus_virus	94.9	4.9e-33
WP_108703173.1|1148518_1148794_-	hypothetical protein	NA	Q4ZCN9	Staphylococcus_virus	94.5	3.0e-42
WP_108703172.1|1148793_1149195_-	hypothetical protein	NA	A0A0H4IPW3	Staphylococcus_phage	80.6	5.6e-53
WP_031895369.1|1149209_1149452_-	phage protein	NA	Q4ZBT7	Staphylococcus_virus	92.5	4.4e-37
WP_001807473.1|1150014_1150419_-	DUF1064 domain-containing protein	NA	Q4ZDX8	Staphylococcus_virus	100.0	7.1e-72
WP_001123673.1|1150429_1150651_-	DUF3269 family protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
WP_156979383.1|1150663_1150822_-	hypothetical protein	NA	A0A0H3U301	Staphylococcus_phage	98.1	1.3e-21
WP_000443353.1|1150818_1151604_-	ATP-binding protein	NA	A0A0H4J332	Staphylococcus_phage	100.0	1.9e-145
WP_025920880.1|1151616_1152438_-	replication protein	NA	A0A0H3U476	Staphylococcus_phage	95.7	2.1e-118
WP_000240897.1|1152409_1153192_-	AP2 domain-containing protein	NA	A0A2I6PDA5	Staphylococcus_phage	98.0	3.1e-140
WP_025920881.1|1153191_1153860_-	hypothetical protein	NA	A0A2I6PDA6	Staphylococcus_phage	98.6	3.6e-129
WP_025920882.1|1153871_1154315_-	single-stranded DNA-binding protein	NA	G4KNN8	Staphylococcus_phage	99.3	3.1e-76
WP_000840496.1|1154311_1154962_-	single-stranded DNA-binding protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_025920883.1|1154962_1155499_-	hypothetical protein	NA	A0A0F6N4M6	Staphylococcus_phage	98.3	8.0e-79
WP_000291488.1|1155511_1155772_-	DUF1108 family protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
WP_000048121.1|1155864_1156026_-	DUF1270 family protein	NA	A0A059T7J6	Staphylococcus_phage	100.0	1.9e-20
WP_025920884.1|1156018_1156240_-	hypothetical protein	NA	A0A0E3T8H0	Staphylococcus_phage	98.6	1.9e-31
WP_025920885.1|1156253_1156703_-	hypothetical protein	NA	A1KWZ2	Staphylococcus_virus	99.3	6.7e-79
WP_000187184.1|1156742_1156967_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001148569.1|1156967_1157759_-	phage antirepressor KilAC domain-containing protein	NA	Q8SDX0	Staphylococcus_phage	100.0	1.5e-145
WP_033843167.1|1157913_1158231_-	hypothetical protein	NA	S4V9P0	Staphylococcus_phage	81.2	1.4e-38
WP_001106625.1|1158246_1158501_-	helix-turn-helix transcriptional regulator	NA	B7T095	Staphylococcus_virus	100.0	1.8e-41
WP_000874710.1|1158690_1159329_+	LexA family transcriptional regulator	NA	A0A0E3TAG1	Staphylococcus_phage	100.0	8.8e-117
WP_000896616.1|1159379_1159880_+	hypothetical protein	NA	B7T094	Staphylococcus_virus	100.0	1.1e-71
WP_054192951.1|1159883_1160399_+	hypothetical protein	NA	I1W624	Staphylococcus_phage	98.8	1.6e-36
WP_001145728.1|1160461_1161511_+|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	100.0	1.6e-203
WP_001074405.1|1161578_1162976_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001010508.1|1163126_1163591_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_000807674.1|1163580_1164822_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.5	1.8e-110
WP_000205572.1|1164936_1166244_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1166341_1167103_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
1167145:1167161	attR	TTAAAATAATTTTAATT	NA	NA	NA	NA
>prophage 94
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1170587	1171613	2747891		Bacillus_virus(100.0%)	1	NA	NA
WP_000571205.1|1170587_1171613_-	methionine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	1.8e-26
>prophage 95
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1174682	1179860	2747891		Streptococcus_phage(50.0%)	8	NA	NA
WP_000589550.1|1174682_1175039_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001147956.1|1175182_1175503_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	35.1	9.1e-06
WP_000422908.1|1175652_1176192_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150033.1|1176274_1176991_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	29.7	3.4e-16
WP_000974451.1|1177138_1177561_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1177959_1178454_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255550.1|1178609_1179227_+	amino acid transporter	NA	NA	NA	NA	NA
WP_016187137.1|1179299_1179860_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.9	3.8e-31
>prophage 96
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1183263	1184507	2747891		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1183263_1183464_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_001622483.1|1183820_1184507_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	2.9e-33
>prophage 97
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1193768	1202525	2747891		Staphylococcus_phage(50.0%)	8	NA	NA
WP_001806213.1|1193768_1194497_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	36.8	2.1e-18
WP_000999093.1|1194781_1195396_-	stage II sporulation protein M	NA	NA	NA	NA	NA
WP_001085185.1|1196362_1196827_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
WP_001050026.1|1196848_1199221_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.7	7.3e-92
WP_001165966.1|1199254_1199995_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|1200123_1200357_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1200423_1200882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|1201220_1202525_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 98
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1213568	1219381	2747891		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1213568_1214156_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|1214718_1215663_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|1215773_1216769_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369722.1|1216765_1217677_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1218445_1219381_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 99
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1223541	1226370	2747891		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662699.1|1223541_1226370_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.7	0.0e+00
>prophage 100
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1229661	1230501	2747891		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000749393.1|1229661_1230501_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 101
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1236582	1242296	2747891		Streptococcus_phage(66.67%)	5	NA	NA
WP_001622509.1|1236582_1237665_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	3.4e-44
WP_000686346.1|1238029_1238896_-	DegV family protein	NA	NA	NA	NA	NA
WP_160190568.1|1239039_1239681_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.1	1.5e-36
WP_086097575.1|1239852_1240908_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460988.1|1241225_1242296_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 102
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1251580	1274803	2747891		uncultured_Caudovirales_phage(35.71%)	18	NA	NA
WP_000616861.1|1251580_1252342_-	ATP-binding cassette domain-containing protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.6	2.7e-16
WP_001245581.1|1252338_1253295_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876313.1|1253281_1254253_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	79.9	1.0e-140
WP_000562500.1|1254627_1255599_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	3.2e-171
WP_000855505.1|1255716_1257822_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1257784_1258183_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068497.1|1258984_1259851_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1259870_1260371_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193753.1|1260711_1262217_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.6e-58
WP_031785486.1|1262294_1262396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429016.1|1262486_1263404_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	2.1e-07
WP_000197263.1|1264206_1264755_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663021.1|1264912_1265971_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.9	2.6e-20
WP_000606781.1|1266210_1267725_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589263.1|1267717_1268695_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	5.4e-25
WP_000983676.1|1268915_1270697_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525111.1|1270708_1272592_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_020977069.1|1272862_1274803_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.3	4.9e-110
>prophage 103
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1277947	1287792	2747891		Pandoravirus(12.5%)	12	NA	NA
WP_001217805.1|1277947_1279099_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
WP_000604517.1|1279082_1279676_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	8.9e-39
WP_000446726.1|1280026_1280695_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	7.4e-66
WP_000941336.1|1280696_1281116_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_160190569.1|1281119_1281833_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.1	1.9e-51
WP_000637683.1|1281931_1282516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093554.1|1282795_1283236_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1283576_1284050_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1284024_1284711_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|1284710_1285766_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702775.1|1285837_1286821_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	43.0	7.3e-62
WP_000931231.1|1286952_1287792_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.3	1.9e-55
>prophage 104
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1299413	1300787	2747891		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000952028.1|1299413_1300787_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	33.8	2.3e-45
>prophage 105
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1305763	1312043	2747891		Bacillus_phage(33.33%)	6	NA	NA
WP_000857605.1|1305763_1307437_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	23.2	3.4e-11
WP_160190570.1|1307433_1309065_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	28.2	8.8e-12
WP_160190630.1|1309283_1310159_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358502.1|1310330_1311014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148819.1|1311016_1311475_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820900.1|1311476_1312043_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	4.7e-21
>prophage 106
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1318988	1319462	2747891		Pandoravirus(100.0%)	1	NA	NA
WP_000844823.1|1318988_1319462_-	cupin	NA	A0A291AU44	Pandoravirus	38.2	3.2e-15
>prophage 107
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1324724	1325522	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1324724_1325522_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 108
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1330244	1331006	2747891		Planktothrix_phage(100.0%)	1	NA	NA
WP_000153733.1|1330244_1331006_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	3.2e-33
>prophage 109
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1335385	1336429	2747891		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_001030756.1|1335385_1336429_-	alpha/beta hydrolase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	28.0	4.4e-17
>prophage 110
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1342952	1343750	2747891		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1342952_1343750_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 111
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1346979	1350938	2747891		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1346979_1348707_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793048.1|1349127_1350423_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	1.5e-14
WP_000832260.1|1350539_1350938_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 112
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1357873	1358617	2747891		Indivirus(100.0%)	1	NA	NA
WP_160190571.1|1357873_1358617_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.2	2.0e-11
>prophage 113
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1369701	1370262	2747891	integrase	Streptococcus_phage(100.0%)	1	1363855:1363869	1373849:1373863
1363855:1363869	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_160190572.1|1369701_1370262_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7Y4J2	Streptococcus_phage	31.3	1.3e-18
WP_160190572.1|1369701_1370262_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7Y4J2	Streptococcus_phage	31.3	1.3e-18
1373849:1373863	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 114
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1383563	1386917	2747891		Tupanvirus(50.0%)	3	NA	NA
WP_001200749.1|1383563_1384574_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.6	1.5e-33
WP_001796423.1|1385072_1385594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000180234.1|1385621_1386917_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 115
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1395105	1396428	2747891		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860583.1|1395105_1396428_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.3	9.7e-110
>prophage 116
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1407731	1408388	2747891		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455258.1|1407731_1408388_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	6.4e-46
>prophage 117
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1412055	1415376	2747891		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100830.1|1412055_1413432_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	1.8e-21
WP_000347068.1|1413975_1415376_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	2.1e-54
>prophage 118
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1438696	1439359	2747891		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067257.1|1438696_1439359_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	36.9	3.1e-24
>prophage 119
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1445905	1447093	2747891		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250816.1|1445905_1447093_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.8	8.8e-46
>prophage 120
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1450123	1461077	2747891		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1450123_1452205_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1452327_1452798_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1452863_1453277_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1453374_1453629_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA	NA
WP_001827373.1|1453765_1457362_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	1.9e-67
WP_000918680.1|1457525_1461077_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 121
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1464760	1469543	2747891	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1464760_1465309_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1465321_1465504_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1465559_1465703_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872878.1|1465817_1466387_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664731.1|1466467_1466992_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|1466991_1467738_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370179.1|1467745_1468150_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631980.1|1468142_1469543_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	32.0	3.2e-55
>prophage 122
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1475553	1478010	2747891	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897128.1|1475553_1478010_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.3	4.7e-134
>prophage 123
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1496925	1507198	2747891	protease,tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1496925_1498413_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_031785444.1|1498465_1498558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613718.1|1498951_1499428_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154303.1|1499424_1499790_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167941.1|1499767_1500571_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	30.8	5.1e-21
WP_000057594.1|1500786_1501719_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_160190579.1|1501897_1502779_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167886.1|1503007_1505101_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1505358_1505898_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176731.1|1505902_1507198_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.2	1.4e-12
>prophage 124
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1516454	1518919	2747891		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1516454_1517420_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252527.1|1517566_1518919_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 125
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1524802	1527900	2747891	tRNA	Hokovirus(50.0%)	2	NA	NA
WP_001051142.1|1524802_1526776_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	32.6	3.2e-93
WP_000279924.1|1527060_1527900_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.4	1.3e-56
>prophage 126
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1531806	1532424	2747891		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272125.1|1531806_1532424_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	7.1e-47
>prophage 127
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1541539	1543237	2747891		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109055.1|1541539_1543237_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.1	8.7e-55
>prophage 128
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1559887	1566112	2747891		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170274.1|1559887_1560892_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.1	1.4e-23
WP_160190581.1|1561225_1562068_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467994.1|1562104_1562764_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569277.1|1562767_1563793_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.3e-32
WP_001036647.1|1564071_1565214_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634103.1|1565206_1566112_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.4	3.2e-48
>prophage 129
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1582887	1584016	2747891	transposase	Paenibacillus_phage(100.0%)	1	NA	NA
WP_098686295.1|1582887_1584016_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.3	5.2e-80
>prophage 130
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1590115	1592924	2747891		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000072579.1|1590115_1591375_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	37.1	2.2e-47
WP_000028601.1|1591367_1592924_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	97.7	1.1e-282
>prophage 131
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1604457	1606191	2747891	transposase	Paenibacillus_phage(50.0%)	2	NA	NA
WP_160190583.1|1604457_1604709_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	2.5e-11
WP_000041875.1|1605486_1606191_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.6	1.5e-29
>prophage 132
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1612171	1615204	2747891		Hokovirus(50.0%)	2	NA	NA
WP_000424959.1|1612171_1613713_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.2	9.5e-24
WP_000264071.1|1613737_1615204_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 133
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1624160	1625684	2747891		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930500.1|1624160_1625684_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 134
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1634272	1640601	2747891		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|1634272_1634776_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1634796_1635093_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052483.1|1635336_1635528_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
WP_001218729.1|1635613_1636711_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157348.1|1636722_1636926_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_000373079.1|1636955_1637837_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001621659.1|1637990_1638836_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655695.1|1639497_1640601_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.1	1.1e-10
>prophage 135
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1650521	1651364	2747891		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209476.1|1650521_1651364_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.7	3.8e-11
>prophage 136
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1671142	1673877	2747891		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280808.1|1671142_1672165_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
WP_001191950.1|1672142_1673087_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000854324.1|1673076_1673877_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	41.9	6.8e-42
>prophage 137
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1692117	1692795	2747891		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911015.1|1692117_1692795_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.1	1.0e-30
>prophage 138
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1712076	1716516	2747891		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549268.1|1712076_1716516_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	24.3	8.2e-28
>prophage 139
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1728478	1730140	2747891		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570084.1|1728478_1729138_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	36.6	3.4e-23
WP_000736796.1|1729189_1730140_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	2.6e-16
>prophage 140
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1738554	1739991	2747891		Pandoravirus(100.0%)	1	NA	NA
WP_000164000.1|1738554_1739991_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.8	4.8e-30
>prophage 141
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1743749	1748289	2747891		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000925389.1|1743749_1745489_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	2.6e-62
WP_000608820.1|1745749_1746424_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975339.1|1746567_1748289_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	37.4	2.7e-11
>prophage 142
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1765876	1767406	2747891		Vibrio_phage(100.0%)	1	NA	NA
WP_000838200.1|1765876_1767406_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	49.4	8.2e-12
>prophage 143
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1779927	1781433	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008393.1|1779927_1781433_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.1	3.5e-39
>prophage 144
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1792580	1797939	2747891		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894660.1|1792580_1794830_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
WP_000837099.1|1795417_1796386_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127975.1|1796382_1797939_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 145
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1808342	1810404	2747891		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818909.1|1808342_1809440_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166909.1|1809825_1810404_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.4	1.3e-13
>prophage 146
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1818955	1820548	2747891		Bacillus_virus(100.0%)	1	NA	NA
WP_000067369.1|1818955_1820548_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.6	2.9e-15
>prophage 147
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1837141	1838326	2747891		Klosneuvirus(100.0%)	1	NA	NA
WP_001084425.1|1837141_1838326_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	30.1	3.1e-35
>prophage 148
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1843184	1850360	2747891		Tupanvirus(100.0%)	1	NA	NA
WP_001656945.1|1843184_1850360_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	29.9	1.3e-67
>prophage 149
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1855208	1858207	2747891		Bacillus_virus(50.0%)	4	NA	NA
WP_000590842.1|1855208_1855949_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	41.1	1.7e-39
WP_000171926.1|1856290_1856803_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356967.1|1856982_1857186_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160190593.1|1857247_1858207_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 150
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1861547	1864032	2747891		Catovirus(50.0%)	2	NA	NA
WP_000723456.1|1861547_1862693_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	26.1	4.1e-24
WP_000779511.1|1862769_1864032_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.5	1.2e-21
>prophage 151
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1871050	1877615	2747891		Catovirus(50.0%)	6	NA	NA
WP_000413171.1|1871050_1872175_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
WP_001028280.1|1872178_1873288_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459062.1|1873300_1874329_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_160190594.1|1874318_1876142_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.9	3.6e-30
WP_000565293.1|1876161_1876926_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037324.1|1876928_1877615_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	8.2e-28
>prophage 152
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1886446	1887220	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_160190596.1|1886446_1887220_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	2.9e-13
>prophage 153
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1895255	1895855	2747891		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1895255_1895855_-	Superoxide dismutase [Mn/Fe] 2	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 154
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1900804	1901785	2747891		Catovirus(100.0%)	1	NA	NA
WP_001796610.1|1900804_1901785_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.4	2.7e-48
>prophage 155
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1905637	1906840	2747891		Tupanvirus(100.0%)	1	NA	NA
WP_124754849.1|1905637_1906840_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	6.7e-09
>prophage 156
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1915106	1919316	2747891		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570806.1|1915106_1916087_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.4	1.6e-40
WP_001045124.1|1916317_1917310_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924996.1|1917325_1918321_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136627.1|1918317_1919316_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.9	2.0e-14
>prophage 157
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1968414	1970292	2747891		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000065395.1|1968414_1970292_-	restriction endonuclease subunit M	NA	A0A142K7G3	Mycobacterium_phage	27.2	1.2e-33
>prophage 158
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1973857	1983853	2747891		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|1973857_1974658_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_001104170.1|1975045_1975834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001060151.1|1975834_1977169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|1977161_1978988_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|1979000_1979702_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_160190599.1|1980891_1982175_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.3	1.8e-68
WP_000375647.1|1982452_1983853_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 159
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	1990538	1999577	2747891	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884335.1|1990538_1991825_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.2	2.7e-88
WP_000177475.1|1992202_1993717_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.0	2.6e-90
WP_000449218.1|1994042_1994855_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819075.1|1994942_1997606_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	7.9e-119
WP_000255583.1|1997642_1999577_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	4.4e-143
>prophage 160
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2009664	2012793	2747891		Faecalibacterium_phage(33.33%)	5	NA	NA
WP_000742837.1|2009664_2010504_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|2010820_2011174_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779134.1|2011241_2011637_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054109.1|2011896_2012466_+	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|2012592_2012793_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
>prophage 161
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2016106	2016865	2747891		Planktothrix_phage(100.0%)	1	NA	NA
WP_000154162.1|2016106_2016865_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 162
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2035983	2036997	2747891		Faustovirus(100.0%)	1	NA	NA
WP_000639196.1|2035983_2036997_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	21.9	1.4e-07
>prophage 163
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2049393	2050086	2747891		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185857.1|2049393_2050086_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	37.6	1.7e-28
>prophage 164
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2079708	2081568	2747891		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125632.1|2079708_2081568_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	1.3e-14
>prophage 165
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2108533	2109289	2747891		Planktothrix_phage(100.0%)	1	NA	NA
WP_000923765.1|2108533_2109289_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	1.8e-31
>prophage 166
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2112725	2113223	2747891		Canarypox_virus(100.0%)	1	NA	NA
WP_001065267.1|2112725_2113223_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	2.4e-21
>prophage 167
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2118261	2120645	2747891		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071717.1|2118261_2120112_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	1.2e-235
WP_000173331.1|2120108_2120645_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.0	3.9e-41
>prophage 168
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2125521	2135633	2747891	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000038850.1|2125521_2127231_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	2.9e-58
WP_000011688.1|2127508_2127721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001028779.1|2128000_2128444_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_001172328.1|2128637_2130233_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	37.0	6.9e-78
WP_001796575.1|2130295_2130625_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130051.1|2130920_2132417_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031407.1|2132612_2133503_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001237623.1|2133625_2134042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030055.1|2134295_2135633_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	27.4	4.2e-20
>prophage 169
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2163805	2168687	2747891		Staphylococcus_phage(66.67%)	4	NA	NA
WP_000751266.1|2163805_2164507_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	3.1e-38
WP_000996740.1|2164782_2165271_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379831.1|2165776_2167588_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.7e-35
WP_000725216.1|2167949_2168687_+	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.7	6.1e-05
>prophage 170
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2175992	2180390	2747891		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_000161365.1|2175992_2176991_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	3.5e-35
WP_000076662.1|2177080_2177287_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024132.1|2177981_2180390_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.7	4.9e-128
>prophage 171
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2189632	2192625	2747891	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001063338.1|2189632_2191741_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.6	1.5e-117
WP_000262599.1|2192103_2192625_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.3	2.4e-27
>prophage 172
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2199050	2205433	2747891		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062662.1|2199050_2200790_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	6.0e-35
WP_000473692.1|2201089_2203156_+	PTS glucoside EIICBA component	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_117223756.1|2203535_2203946_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240665.1|2203987_2204332_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228154.1|2204464_2205433_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.9	1.2e-11
>prophage 173
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2214746	2215739	2747891		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161536.1|2214746_2215739_-	D-lactate dehydrogenase	NA	M1HYB0	Acanthocystis_turfacea_Chlorella_virus	31.5	1.1e-36
>prophage 174
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2225154	2225850	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000382895.1|2225154_2225850_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.0	8.8e-38
>prophage 175
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2245243	2252430	2747891		Bacillus_phage(66.67%)	6	NA	NA
WP_000721337.1|2245243_2246110_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.9	3.4e-79
WP_000217713.1|2246236_2246545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000678763.1|2246684_2246951_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072468810.1|2247234_2249043_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.7	2.4e-95
WP_000755944.1|2249174_2249567_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000088708.1|2249568_2252430_+	DUF3427 domain-containing protein	NA	Q5YA94	Bacillus_phage	27.9	4.0e-28
>prophage 176
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2260259	2260955	2747891		Bacillus_phage(100.0%)	1	NA	NA
WP_000217460.1|2260259_2260955_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	36.5	6.6e-09
>prophage 177
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2264384	2265203	2747891		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824951.1|2264384_2265203_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	29.5	3.2e-10
>prophage 178
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2273142	2274700	2747891		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173856.1|2273142_2273958_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	4.7e-14
WP_000590515.1|2273950_2274700_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	8.1e-21
>prophage 179
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2280932	2285359	2747891		Bacillus_virus(50.0%)	4	NA	NA
WP_000923514.1|2280932_2281595_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.0	2.7e-20
WP_000072159.1|2281587_2282364_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000026186.1|2282757_2283945_+	MFS transporter	NA	NA	NA	NA	NA
WP_000700906.1|2284006_2285359_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	35.8	6.6e-13
>prophage 180
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2288994	2290221	2747891		Mycoplasma_phage(100.0%)	1	NA	NA
WP_000948985.1|2288994_2290221_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	39.6	8.6e-20
>prophage 181
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2308593	2314724	2747891		Bacillus_phage(66.67%)	6	NA	NA
WP_001176860.1|2308593_2309736_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	43.9	6.9e-56
WP_000779354.1|2310003_2310390_+	GtrA family protein	NA	NA	NA	NA	NA
WP_000482647.1|2310523_2310631_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_000301894.1|2310657_2310825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001064831.1|2311202_2312942_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	23.9	8.7e-34
WP_000488492.1|2312990_2314724_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.1e-32
>prophage 182
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2318185	2323939	2747891		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000971558.1|2318185_2319301_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	25.0	1.2e-20
WP_000286884.1|2319311_2320004_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200952.1|2320014_2320482_+	QueT transporter family protein	NA	NA	NA	NA	NA
WP_001056918.1|2320540_2321518_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	1.4e-142
WP_000916696.1|2321519_2322467_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	78.7	4.0e-142
WP_000594516.1|2323009_2323939_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.4	1.5e-120
>prophage 183
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2331762	2332494	2747891		Bacillus_virus(100.0%)	1	NA	NA
WP_000615468.1|2331762_2332494_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.3	3.4e-24
>prophage 184
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2348335	2349895	2747891		Escherichia_phage(100.0%)	1	NA	NA
WP_000692645.1|2348335_2349895_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 185
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2371293	2372328	2747891		Bacillus_virus(100.0%)	1	NA	NA
WP_000655972.1|2371293_2372328_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 186
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2382743	2389304	2747891		Staphylococcus_phage(25.0%)	8	NA	NA
WP_000340143.1|2382743_2383472_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.2	1.5e-27
WP_000372850.1|2383605_2384169_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000793171.1|2384345_2384801_-	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
WP_000977035.1|2384797_2385241_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000477342.1|2385407_2386781_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.3	6.7e-13
WP_000249501.1|2386773_2387448_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.6	1.2e-52
WP_000761401.1|2387583_2388639_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229907.1|2388638_2389304_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	7.2e-37
>prophage 187
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2393042	2394251	2747891		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|2393042_2394251_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 188
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2406348	2407248	2747891		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524843.1|2406348_2407248_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.2	4.7e-15
>prophage 189
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2420053	2420935	2747891		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000730049.1|2420053_2420935_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	2.9e-62
>prophage 190
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2428815	2429451	2747891		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285454.1|2428815_2429451_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	4.2e-10
>prophage 191
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2443200	2447708	2747891		Staphylococcus_phage(50.0%)	4	NA	NA
WP_072468848.1|2443200_2443839_+	autolysin	NA	A0A1W6JQU5	Staphylococcus_phage	48.1	2.6e-36
WP_000684154.1|2444675_2445800_+	NAD(P)-binding protein	NA	A0A2K9L3K5	Tupanvirus	22.8	1.6e-12
WP_000417008.1|2445891_2446845_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	29.2	5.8e-32
WP_000733941.1|2447207_2447708_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 192
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2451628	2452438	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717388.1|2451628_2452438_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.4e-07
>prophage 193
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2471415	2472021	2747891		Pithovirus(100.0%)	1	NA	NA
WP_000913006.1|2471415_2472021_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.6	3.8e-13
>prophage 194
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2484166	2487334	2747891		Leptospira_phage(100.0%)	1	NA	NA
WP_000592293.1|2484166_2487334_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	6.2e-62
>prophage 195
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2511032	2512699	2747891		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389669.1|2511032_2511842_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.5	4.3e-20
WP_000027572.1|2511838_2512699_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	25.7	1.1e-10
>prophage 196
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2515740	2520575	2747891		Mycobacterium_phage(50.0%)	4	NA	NA
WP_000204279.1|2515740_2517177_+	MarR family transcriptional regulator	NA	A0A088F7M4	Mycobacterium_phage	31.2	3.5e-57
WP_000655242.1|2518257_2518440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001622005.1|2518421_2518622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000130128.1|2518910_2520575_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	26.1	3.6e-45
>prophage 197
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2526130	2526985	2747891		Clostridium_phage(100.0%)	1	NA	NA
WP_001044440.1|2526130_2526985_+	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	39.7	2.2e-06
>prophage 198
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2530497	2532454	2747891		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001015496.1|2530497_2531346_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	38.4	1.3e-43
WP_001622009.1|2531564_2531786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001622010.1|2531713_2532454_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	30.3	2.3e-15
>prophage 199
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2538776	2540189	2747891		Pandoravirus(100.0%)	1	NA	NA
WP_000169213.1|2538776_2540189_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	3.0e-48
>prophage 200
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2545990	2547553	2747891		Vibrio_phage(100.0%)	1	NA	NA
WP_000792328.1|2545990_2547553_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.2	1.2e-18
>prophage 201
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2557758	2558727	2747891		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989088.1|2557758_2558727_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 202
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2574553	2575462	2747891		Klosneuvirus(100.0%)	1	NA	NA
WP_000162593.1|2574553_2575462_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.3	1.2e-26
>prophage 203
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2579058	2586438	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_061731801.1|2579058_2586438_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	24.3	2.3e-19
>prophage 204
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2592710	2595531	2747891		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334465.1|2592710_2594516_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.6	2.0e-97
WP_000908197.1|2594748_2595531_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.5	1.7e-08
>prophage 205
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2605142	2608979	2747891		Clostridium_phage(50.0%)	4	NA	NA
WP_000070865.1|2605142_2605586_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|2605706_2606417_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_001083321.1|2606731_2607394_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242295.1|2607677_2608979_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	3.6e-133
>prophage 206
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2616917	2618528	2747891		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159966.1|2616917_2618528_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.1e-146
>prophage 207
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2626332	2634085	2747891		Bacillus_virus(25.0%)	9	NA	NA
WP_000273353.1|2626332_2626932_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	4.8e-32
WP_000460243.1|2626932_2628009_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248725.1|2627995_2628832_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_072492072.1|2628864_2629962_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.6	6.1e-41
WP_000697337.1|2629958_2630378_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654179.1|2630484_2631009_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|2631035_2632274_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|2632301_2632931_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723406.1|2632954_2634085_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	31.1	1.4e-27
>prophage 208
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2644518	2644914	2747891		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|2644518_2644914_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 209
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2650823	2651471	2747891		Moumouvirus(100.0%)	1	NA	NA
WP_001187625.1|2650823_2651471_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.5	9.5e-10
>prophage 210
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2658671	2660192	2747891		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178935.1|2658671_2660192_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 211
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2665866	2667894	2747891		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546588.1|2665866_2667894_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.1	1.5e-24
>prophage 212
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2673043	2676427	2747891		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2673043_2673406_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_000390829.1|2673754_2674756_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_160190625.1|2674874_2675201_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190825.1|2675202_2675682_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041107.1|2675656_2676427_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	1.3e-21
>prophage 213
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2691411	2696135	2747891		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094576.1|2691411_2692941_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_072399972.1|2692970_2693990_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2694111_2694366_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047819.1|2694365_2696135_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.1	7.0e-63
>prophage 214
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2699900	2713965	2747891	tRNA	Moraxella_phage(16.67%)	13	NA	NA
WP_000159047.1|2699900_2700926_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.9	3.1e-63
WP_000106320.1|2701239_2702850_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.6	3.3e-19
WP_072468947.1|2702941_2703055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602061.1|2703214_2705143_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	30.2	7.1e-53
WP_001283613.1|2705395_2706031_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_073394851.1|2706385_2707414_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581077.1|2707473_2707698_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052281.1|2707906_2709157_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	3.4e-40
WP_000790314.1|2709340_2710291_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_000141419.1|2710439_2711924_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.8	4.0e-19
WP_001253295.1|2711920_2712880_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_031785433.1|2713069_2713177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000688492.1|2713248_2713965_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 215
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2721093	2723070	2747891		uncultured_virus(100.0%)	2	NA	NA
WP_000917289.1|2721093_2721378_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|2721453_2723070_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
>prophage 216
NZ_CP047828	Staphylococcus aureus strain UP_1073 chromosome, complete genome	2747891	2726958	2747420	2747891	integrase	Staphylococcus_phage(97.3%)	38	2721341:2721356	2732611:2732626
2721341:2721356	attL	TTTTAAATGAAGAAGA	NA	NA	NA	NA
WP_000791399.1|2726958_2728014_+	succinyl-diaminopimelate desuccinylase	NA	A0A2I6PER8	Staphylococcus_phage	34.6	6.0e-38
WP_000595616.1|2728035_2729055_+	beta-channel forming cytolysin	NA	A0A2I6PEU3	Staphylococcus_phage	39.8	2.6e-54
WP_000857191.1|2730192_2731230_-|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	100.0	9.1e-180
WP_000825947.1|2731288_2731753_-	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_000705248.1|2731852_2732035_-	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_000591749.1|2732238_2732580_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000759682.1|2732585_2733518_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
2732611:2732626	attR	TCTTCTTCATTTAAAA	NA	NA	NA	NA
WP_001031454.1|2733533_2734247_-	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_001801500.1|2734209_2734383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000854073.1|2734379_2734643_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	98.9	2.1e-40
WP_001025404.1|2734658_2734874_+	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000128907.1|2734862_2735192_-	hypothetical protein	NA	M9NS98	Staphylococcus_phage	100.0	2.7e-53
WP_001148605.1|2735242_2735995_+	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_001148862.1|2736010_2736208_+	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_000762519.1|2736194_2736575_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	99.2	3.4e-68
WP_001120201.1|2736629_2736953_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2736949_2737111_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2737205_2737508_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2737512_2737773_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|2737781_2738045_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700555.1|2738053_2739997_+	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
WP_000138475.1|2739998_2740919_+	recombinase	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_073394849.1|2740999_2741617_+	MBL fold metallo-hydrolase	NA	A0A2I6PDI9	Staphylococcus_phage	100.0	9.1e-87
WP_000610648.1|2741617_2742088_+	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	98.7	1.3e-80
WP_000148323.1|2742117_2743011_+	DnaD domain-containing protein	NA	A0A2I6PDG7	Staphylococcus_phage	98.7	2.7e-140
WP_000338530.1|2743017_2743236_+	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000401960.1|2743244_2743649_+	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	100.0	1.9e-72
WP_000101288.1|2743661_2744030_+	hypothetical protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
WP_000131370.1|2744033_2744276_+	hypothetical protein	NA	Q4ZDP7	Staphylococcus_virus	95.0	2.1e-39
WP_001065097.1|2744290_2744545_+	DUF1024 family protein	NA	A0A0H3U469	Staphylococcus_phage	100.0	5.0e-39
WP_001066447.1|2744694_2745231_+	hypothetical protein	NA	A0A0H3U2Z8	Staphylococcus_phage	100.0	7.2e-96
WP_001282074.1|2745267_2745513_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_000195803.1|2745509_2745716_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592207.1|2745712_2746099_+	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000595265.1|2746095_2746245_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001622114.1|2746244_2746445_+	DUF1514 domain-containing protein	NA	A0A2I6PDV9	Staphylococcus_phage	98.5	4.0e-28
WP_000590122.1|2746472_2746889_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988336.1|2747120_2747420_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
