The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	0	25605	2741466	head,holin,portal,protease,capsid,tail,terminase	Staphylococcus_phage(100.0%)	28	NA	NA
WP_000625088.1|0_1662_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000025274.1|1677_2865_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_160192948.1|2848_3586_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	99.6	1.8e-129
WP_000154559.1|3609_4755_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000238236.1|4774_5059_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5048_5333_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|5316_5679_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114226.1|5675_6080_+	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|6076_6484_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268740.1|6484_7129_+|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_071621395.1|7170_7395_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|7444_7795_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_000504568.1|8039_12569_+|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	97.0	0.0e+00
WP_000567396.1|12565_14050_+|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	99.8	4.5e-297
WP_000582152.1|14065_17848_+	hypothetical protein	NA	A0A068A201	Staphylococcus_phage	99.6	0.0e+00
WP_001000058.1|17840_17993_+	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_001262621.1|18038_18326_+	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_000340977.1|18381_18756_+	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_000034846.1|19167_19950_+	staphylococcal enterotoxin type P	NA	A0A075M4C7	Staphylococcus_phage	99.6	1.6e-149
WP_011447039.1|20152_20329_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_031762631.1|20381_20489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|20540_20795_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861026.1|20806_21562_+	CHAP domain-containing protein	NA	A0A075LZV3	Staphylococcus_phage	100.0	1.2e-152
WP_000920042.1|21752_22244_+	staphylokinase	NA	A0A075LYD3	Staphylococcus_phage	100.0	8.0e-86
WP_000727645.1|23319_23769_-	chemotaxis-inhibiting protein CHIPS	NA	A0A075LZI2	Staphylococcus_phage	100.0	8.7e-79
WP_000702262.1|24451_24802_+	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|24854_25115_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|25425_25605_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
>prophage 2
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	31213	33660	2741466		Staphylococcus_phage(100.0%)	3	NA	NA
WP_000991306.1|31213_32110_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000645727.1|32110_32791_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763043.1|32787_33660_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
>prophage 3
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	39423	39825	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000205106.1|39423_39825_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
>prophage 4
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	44021	46048	2741466		Bacillus_virus(50.0%)	2	NA	NA
WP_000149686.1|44021_44582_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275727.1|44950_46048_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
>prophage 5
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	50078	52362	2741466		Bacillus_virus(100.0%)	2	NA	NA
WP_000284436.1|50078_51548_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000040866.1|51540_52362_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
>prophage 6
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	56063	62830	2741466		Gordonia_phage(33.33%)	5	NA	NA
WP_000572878.1|56063_57359_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|57467_57770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272056.1|57941_58634_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992924.1|58630_60823_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774556.1|60826_62830_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
>prophage 7
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	70004	75033	2741466		Catovirus(33.33%)	5	NA	NA
WP_001231451.1|70004_70952_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
WP_001147865.1|71032_72394_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.6	1.4e-103
WP_000548781.1|72563_73094_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140172.1|73340_74411_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613738.1|74478_75033_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
>prophage 8
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	78485	78899	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001557448.1|78485_78899_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	38.3	6.7e-17
>prophage 9
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	83953	84583	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|83953_84583_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 10
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	100063	101800	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|100063_101800_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 11
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	115199	223753	2741466	transposase,tRNA,protease	Staphylococcus_phage(92.73%)	101	NA	NA
WP_001557163.1|115199_116519_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000063582.1|117102_118164_+	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_000649908.1|118421_119879_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_001144055.1|119865_120594_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
WP_001793998.1|120729_121872_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000181394.1|121876_122347_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_001251224.1|122505_123105_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000031108.1|123129_123282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000901023.1|123829_124225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000116228.1|124420_125806_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000669376.1|126258_127080_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000437969.1|127242_128355_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_001045135.1|128376_129000_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000375864.1|129355_129820_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000992518.1|129998_131123_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000290301.1|131191_131536_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_001802255.1|132074_132173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000238227.1|132463_133660_+	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_000584628.1|133649_136586_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001244175.1|136582_137524_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_000782121.1|137644_138607_-	foldase	NA	NA	NA	NA	NA
WP_000477959.1|138811_139369_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000648118.1|140103_140469_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000004981.1|140610_141033_-	HIT family protein	NA	NA	NA	NA	NA
WP_000216874.1|141166_141907_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_000551836.1|141899_143123_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000737976.1|143246_143750_-	signal transduction protein TraP	NA	NA	NA	NA	NA
WP_001790154.1|143912_144023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000233526.1|144012_145050_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_000162881.1|145107_146031_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000167542.1|146054_147455_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000132890.1|147777_148332_+	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_010922839.1|149691_150474_+	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_160192951.1|150754_151474_+	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	34.3	3.1e-25
WP_000713847.1|151508_152237_+	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
WP_001236362.1|153200_153956_+	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
WP_000736712.1|154238_155015_+	staphylococcal enterotoxin type G	NA	NA	NA	NA	NA
WP_160192952.1|155566_156343_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000617704.1|156363_156600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001253432.1|156677_157172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000206343.1|158005_158794_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	98.5	3.6e-144
WP_000473596.1|160157_161093_+	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782463.1|161094_162078_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000543854.1|162447_163239_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000550252.1|163243_163717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000469591.1|163972_164191_+	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
WP_001092784.1|164663_165245_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.2	2.8e-53
WP_001039427.1|166208_166916_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001039454.1|167040_167763_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_160192953.1|167820_168540_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.3	3.9e-129
WP_001038704.1|168660_169380_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_011447030.1|169328_169436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|169537_170257_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_001791797.1|170319_170454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001793440.1|170434_172174_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
WP_000072627.1|172166_173396_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_001792025.1|174471_174573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001801861.1|174695_174791_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_000414216.1|176145_176718_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_000627540.1|176818_177160_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000669024.1|177200_177827_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000070642.1|177901_178897_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_001795210.1|178977_179628_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_012840523.1|179930_180386_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_160192954.1|180544_182023_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.4	1.4e-282
WP_000778528.1|182027_183029_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000718107.1|183025_183283_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672013.1|183348_183822_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_001822900.1|183826_184573_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000109906.1|184950_186543_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000933820.1|186914_188111_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000366163.1|188232_189141_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000453306.1|189352_190186_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000623470.1|192182_192536_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_001200542.1|192532_192898_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091442.1|193153_193456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|193715_194429_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_001168903.1|194868_195504_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|195799_196243_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|196229_196673_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671057.1|196785_197256_-	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_000384171.1|197454_197679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|197954_198809_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989121.1|198895_200188_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221177.1|200187_200502_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_001261668.1|201024_202527_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_160193026.1|203019_204051_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	1.2e-195
WP_000493887.1|204057_204690_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_001159037.1|204700_205882_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_001008549.1|205894_206359_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001196362.1|206480_207482_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001790712.1|207593_207713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|207715_208543_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|209115_209517_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|209639_210203_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|210199_211153_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025067.1|211262_212444_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_001108730.1|212734_215149_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_000836461.1|215170_215482_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_160192955.1|215807_222368_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000285020.1|222484_223753_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	99.1	9.1e-57
>prophage 12
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	235158	240486	2741466		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091387.1|235158_236016_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	100.0	6.8e-72
WP_001048368.1|236044_236641_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118314.1|236661_240486_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
>prophage 13
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	249226	250933	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862095.1|249226_250933_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.8	2.1e-274
>prophage 14
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	257536	260167	2741466	tRNA,protease	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186029.1|257536_258799_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
WP_001279338.1|258892_260167_-|protease	trypsin-like serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 15
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	263936	268069	2741466		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808849.1|263936_265541_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
WP_160192956.1|265527_266685_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553924.1|266799_267246_-	OsmC family protein	NA	NA	NA	NA	NA
WP_160192957.1|267325_268069_+	glycerophosphodiester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.0	8.3e-18
>prophage 16
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	285660	288858	2741466		Streptomyces_phage(100.0%)	1	NA	NA
WP_000226919.1|285660_288858_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.5	4.2e-135
>prophage 17
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	293791	295549	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232648.1|293791_295549_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	2.6e-41
>prophage 18
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	300433	308597	2741466		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080028.1|300433_301138_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_015445861.1|301137_302799_+	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_000849428.1|303297_304785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038317.1|305078_307709_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114454.1|307724_308597_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.6e-42
>prophage 19
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	312512	323665	2741466	tRNA,protease	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808621.1|312512_313433_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_001790562.1|313525_313648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435132.1|313845_315783_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	7.8e-116
WP_000049145.1|316208_317702_+	amino acid permease	NA	NA	NA	NA	NA
WP_001791162.1|317930_318458_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_001125540.1|318486_318687_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|318733_319090_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032657.1|319231_319840_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001280022.1|319858_320788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|320792_320903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160192959.1|320950_322252_+	trigger factor	NA	NA	NA	NA	NA
WP_000472302.1|322402_323665_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
>prophage 20
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	333232	335863	2741466	tRNA	Catovirus(100.0%)	1	NA	NA
WP_000425353.1|333232_335863_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
>prophage 21
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	345797	381410	2741466	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_001005768.1|345797_346802_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019178.1|346803_347829_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|347851_348991_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|349009_349270_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|349544_351824_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000595011.1|352026_354300_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000364542.1|354321_354840_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_001058587.1|355267_357457_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869983.1|357468_357921_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717800.1|357917_358793_+	cell wall amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|359253_360516_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044799.1|360531_362298_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_001790559.1|362630_362759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682646.1|362758_363532_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102729.1|363692_364967_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.4e-105
WP_000704122.1|365051_365474_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|365573_365756_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|365795_365942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985878.1|366178_367192_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409157.1|367503_368646_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	30.8	5.4e-32
WP_000066097.1|368646_369765_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567017.1|370459_371128_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283312.1|371129_373607_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000734075.1|373949_376580_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|376642_376903_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|376906_377335_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|377349_377658_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_031808587.1|377942_378581_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	29.4	3.2e-10
WP_000137774.1|378583_379507_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|379518_380787_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|380786_381410_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 22
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	388082	389303	2741466		Lactococcus_phage(100.0%)	1	NA	NA
WP_000542320.1|388082_389303_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	33.3	2.2e-52
>prophage 23
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	398089	404253	2741466		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|398089_398551_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_000953309.1|398609_400757_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.2	1.6e-32
WP_001282563.1|400813_401788_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|401832_402084_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_000368338.1|402429_404253_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 24
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	407747	410855	2741466		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_160192962.1|407747_409580_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_001119021.1|409715_410855_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.8	1.2e-26
>prophage 25
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	417324	418272	2741466		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|417324_418272_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 26
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	422845	436591	2741466	tRNA	Klosneuvirus(28.57%)	13	NA	NA
WP_001030080.1|422845_424237_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
WP_001797828.1|424571_425195_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411298.1|425205_426024_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217257.1|426084_427902_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
WP_001283055.1|428125_429232_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624577.1|429362_430040_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683940.1|430042_431143_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_001062177.1|431256_432603_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000924220.1|432612_433503_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001213908.1|433628_434414_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564315.1|434455_435319_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095260.1|435305_435716_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|435991_436591_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 27
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	442764	443388	2741466		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223008.1|442764_443388_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 28
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	448932	451744	2741466		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019691.1|448932_450279_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.2	1.7e-61
WP_000202188.1|450271_451744_+	glycine dehydrogenase subunit 2	NA	E3SN07	Prochlorococcus_phage	41.3	2.8e-81
>prophage 29
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	460764	467335	2741466		Indivirus(66.67%)	6	NA	NA
WP_001286928.1|460764_462102_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
WP_000159865.1|462094_462325_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183383.1|462302_463184_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.8	2.0e-10
WP_001124985.1|463615_464068_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_160192965.1|464083_465763_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291533.1|465913_467335_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
>prophage 30
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	474164	475571	2741466		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|474164_475571_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 31
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	481997	483482	2741466		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|481997_483482_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 32
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	487009	498619	2741466		Klosneuvirus(16.67%)	12	NA	NA
WP_001171335.1|487009_487918_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	32.0	4.4e-05
WP_000365240.1|487999_488542_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000392691.1|488646_489096_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000447733.1|489144_490032_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183429.1|490109_490616_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273371.1|490707_491439_+	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368656.1|491431_491974_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159571.1|491966_492704_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064078.1|492836_493562_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987774.1|493542_495294_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
WP_001557355.1|495537_496464_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001033761.1|496456_498619_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	100.0	2.7e-109
>prophage 33
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	503047	505726	2741466		Bacillus_phage(50.0%)	3	NA	NA
WP_001151997.1|503047_503296_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163801.1|503403_504357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000902099.1|504346_505726_+	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
>prophage 34
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	515150	520617	2741466		Bacillus_phage(25.0%)	7	NA	NA
WP_001043863.1|515150_515423_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450555.1|515853_516426_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|516428_517154_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001817755.1|517170_518115_+	heptaprenyl diphosphate synthase subunit II	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|518206_518656_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|518864_519065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269921.1|519450_520617_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
>prophage 35
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	524279	524855	2741466		Bacillus_virus(100.0%)	1	NA	NA
WP_000005212.1|524279_524855_+	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
>prophage 36
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	528227	535733	2741466	tRNA	unidentified_phage(25.0%)	5	NA	NA
WP_000361540.1|528227_529430_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
WP_000049921.1|529416_530388_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525078.1|530411_533105_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858779.1|533426_534719_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
WP_000362218.1|535046_535733_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	1.2e-07
>prophage 37
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	539473	540100	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_001108889.1|539473_540100_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.7e-24
>prophage 38
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	549426	550305	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_001133021.1|549426_550305_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.4e-19
>prophage 39
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	589090	598480	2741466		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282171.1|589090_589795_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_001795441.1|590039_590234_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000691942.1|590245_590497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000404645.1|590534_591659_+	virulence factor C	NA	NA	NA	NA	NA
WP_000995287.1|591674_592112_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934894.1|592535_593492_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175746.1|593691_594171_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000166059.1|594185_595025_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	77.3	2.3e-48
WP_000159900.1|595110_595644_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913317.1|595636_596065_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473653.1|596076_596577_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|596576_596798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342132.1|596989_598480_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.9e-22
>prophage 40
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	601889	603901	2741466		Bacillus_phage(50.0%)	2	NA	NA
WP_000192137.1|601889_602549_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166801.1|602545_603901_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 41
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	610066	610858	2741466		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|610066_610858_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 42
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	614398	619429	2741466		Lactobacillus_phage(33.33%)	7	NA	NA
WP_000138413.1|614398_615535_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	7.4e-34
WP_160192971.1|615566_616196_-	5-bromo-4-chloroindolyl phosphate hydrolase	NA	NA	NA	NA	NA
WP_001215907.1|616214_616484_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|616646_616955_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|617125_617326_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876201.1|617522_617924_+	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000216946.1|618163_619429_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
>prophage 43
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	627476	629078	2741466		Klosneuvirus(100.0%)	1	NA	NA
WP_000942303.1|627476_629078_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 44
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	634167	637621	2741466		Indivirus(50.0%)	3	NA	NA
WP_000079447.1|634167_635019_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000974847.1|635025_635667_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077571.1|635806_637621_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	5.1e-154
>prophage 45
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	641035	641737	2741466		Tupanvirus(100.0%)	1	NA	NA
WP_000571259.1|641035_641737_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	2.0e-13
>prophage 46
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	649835	652190	2741466		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000153613.1|649835_650618_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	35.9	2.7e-27
WP_000173833.1|650619_651618_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.9	8.5e-34
WP_000604816.1|651623_652190_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	32.1	1.3e-23
>prophage 47
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	656508	657771	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000283016.1|656508_657771_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.3	2.6e-96
>prophage 48
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	667430	671812	2741466		Bacillus_phage(50.0%)	2	NA	NA
WP_160192974.1|667430_669821_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.5	4.6e-94
WP_001557340.1|669820_671812_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	1.0e-115
>prophage 49
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	677803	679450	2741466		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|677803_679450_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 50
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	683119	684241	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691301.1|683119_684241_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 51
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	688391	694047	2741466		Phage_Wrath(25.0%)	7	NA	NA
WP_001208755.1|688391_689015_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	5.9e-17
WP_000380730.1|689394_690258_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	9.1e-16
WP_001791425.1|690331_690436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000688122.1|690432_691410_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.7	8.0e-186
WP_001085655.1|691566_691836_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|692289_692439_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000082539.1|692529_694047_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	2.3e-91
>prophage 52
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	704185	708461	2741466		Bacillus_phage(50.0%)	6	NA	NA
WP_000841351.1|704185_704719_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027143.1|704857_705046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000202390.1|705158_705761_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670307.1|705757_706849_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000603970.1|706852_707584_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_130826606.1|707552_708461_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	1.1e-22
>prophage 53
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	712843	717148	2741466	head	Staphylococcus_phage(80.0%)	8	NA	NA
WP_000899334.1|712843_713080_-|head	phage head morphogenesis protein	head	Q4ZE35	Staphylococcus_virus	70.6	2.3e-22
WP_000956747.1|713125_713377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000477492.1|713504_713609_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|714119_714305_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_001788716.1|714728_714839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002340.1|715538_715745_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_160192975.1|716038_716263_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	2.5e-18
WP_001793526.1|716950_717148_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
>prophage 54
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	722217	722694	2741466		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|722217_722694_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 55
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	728636	735118	2741466		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103743.1|728636_729455_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_001077635.1|729929_730472_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516269.1|730477_732487_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.0	4.8e-60
WP_000073352.1|732499_735118_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
>prophage 56
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	744532	745576	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|744532_745576_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 57
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	749774	755315	2741466		Bacillus_virus(33.33%)	4	NA	NA
WP_000664775.1|749774_751061_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	28.4	7.9e-16
WP_000089941.1|751060_752326_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	1.2e-40
WP_001293306.1|752356_753070_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_160193027.1|753074_755315_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	6.9e-84
>prophage 58
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	760455	772268	2741466	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|760455_761427_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282298.1|761441_762359_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|762527_762878_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043635.1|763263_765381_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_000020853.1|765385_765703_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|765699_765984_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097460.1|766004_767180_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036633.1|767200_767668_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_001801936.1|767957_772268_-	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 59
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	776541	777312	2741466		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473699.1|776541_777312_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 60
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	782091	795763	2741466	tRNA,protease	Erwinia_phage(16.67%)	11	NA	NA
WP_000379054.1|782091_783495_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	4.9e-27
WP_000072681.1|783560_784106_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015601.1|784102_784999_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	3.6e-31
WP_000195254.1|785416_786724_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001557331.1|786879_788955_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000593194.1|789128_790001_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000672869.1|790173_791418_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041666.1|791445_792564_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_000110253.1|792790_793699_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.0e-17
WP_001020801.1|793720_794887_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176393.1|794995_795763_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 61
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	809147	811397	2741466		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|809147_809879_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|809994_810228_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|810662_811397_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 62
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	821767	823762	2741466		Moumouvirus(100.0%)	1	NA	NA
WP_160192981.1|821767_823762_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 63
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	826909	827845	2741466	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161291.1|826909_827845_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 64
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	832857	835114	2741466		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_000722165.1|832857_834057_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
WP_000933956.1|834272_834491_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368226.1|834490_835114_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	1.0e-21
>prophage 65
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	838428	839040	2741466		Pandoravirus(100.0%)	1	NA	NA
WP_001040248.1|838428_839040_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	1.6e-27
>prophage 66
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	843007	847618	2741466		Halovirus(33.33%)	4	NA	NA
WP_070004089.1|843007_844108_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	4.3e-63
WP_000767028.1|844109_845384_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016166.1|845401_846283_-	aspartate carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_001178619.1|846310_847618_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 67
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	852082	854836	2741466	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000384691.1|852082_854836_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	28.0	3.6e-90
>prophage 68
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	874417	874606	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245796.1|874417_874606_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	85.2	2.5e-19
>prophage 69
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	883622	885582	2741466		Staphylococcus_phage(100.0%)	3	NA	NA
WP_001802045.1|883622_883847_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	5.6e-18
WP_000765708.1|883803_883950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000857488.1|884622_885582_+	beta-channel forming cytolysin	NA	A0A2H4PQH7	Staphylococcus_phage	30.3	7.4e-35
>prophage 70
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	901212	905770	2741466		Staphylococcus_phage(33.33%)	3	NA	NA
WP_001018928.1|901212_901527_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249272.1|901699_904048_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.1	3.2e-15
WP_000161938.1|904057_905770_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
>prophage 71
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	910772	911831	2741466	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003566.1|910772_911831_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
>prophage 72
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	923777	926685	2741466		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_000401377.1|923777_924260_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263796.1|924261_924804_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814565.1|924873_925263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|925265_925520_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757575.1|925758_926685_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	2.2e-12
>prophage 73
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	938202	940050	2741466		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|938202_940050_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 74
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	948182	957015	2741466		Mycoplasma_phage(25.0%)	9	NA	NA
WP_000433551.1|948182_949277_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.4e-37
WP_001020625.1|949289_949829_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455597.1|949972_950248_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|950415_951822_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000863439.1|951825_953118_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068176.1|953208_954186_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035320.1|954189_955302_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000668336.1|955472_956099_-	cell-wall-binding lipoprotein	NA	NA	NA	NA	NA
WP_000957037.1|956463_957015_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.0	1.6e-13
>prophage 75
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	963027	967407	2741466		Bacillus_virus(50.0%)	5	NA	NA
WP_001289618.1|963027_963261_+	glutaredoxin family protein	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040051.1|963497_965216_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|965218_965485_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505966.1|965638_966181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000685067.1|966234_967407_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	4.0e-75
>prophage 76
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	970838	985600	2741466		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921965.1|970838_972239_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
WP_000273253.1|972231_973038_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101899.1|973304_974552_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709277.1|974573_976052_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	3.2e-77
WP_000238669.1|976066_976633_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000030811.1|976635_977664_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000483720.1|977656_979141_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000032740.1|979119_981309_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000666806.1|981301_981973_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000848350.1|981974_982238_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|982237_982942_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010413.1|982945_984070_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|984056_984539_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_000225836.1|984739_985600_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.8	4.4e-39
>prophage 77
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	996054	999801	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_160192984.1|996054_999801_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	1.1e-54
>prophage 78
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1003467	1004496	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_160192985.1|1003467_1004496_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	31.7	5.4e-15
>prophage 79
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1012801	1016522	2741466		Enterococcus_phage(50.0%)	7	NA	NA
WP_001788574.1|1012801_1013092_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	38.0	7.5e-07
WP_001790177.1|1013155_1013287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081351.1|1013332_1014292_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766009.1|1014779_1015136_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001792054.1|1015224_1015362_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_001795266.1|1015502_1015793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571167.1|1015880_1016522_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
>prophage 80
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1026716	1031927	2741466	protease	Pithovirus(33.33%)	3	NA	NA
WP_001795272.1|1026716_1029041_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928413.1|1029259_1030063_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001049950.1|1030364_1031927_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
>prophage 81
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1050859	1052668	2741466		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082725.1|1050859_1052668_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
>prophage 82
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1058480	1060450	2741466		Bacillus_virus(100.0%)	2	NA	NA
WP_000427767.1|1058480_1059461_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	1.3e-15
WP_001067052.1|1059463_1060450_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	1.4e-15
>prophage 83
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1064101	1066115	2741466		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000786734.1|1064101_1065043_-	ATP-binding cassette domain-containing protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
WP_000140050.1|1065032_1066115_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
>prophage 84
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1074706	1081516	2741466		Micromonas_sp._RCC1109_virus(33.33%)	4	NA	NA
WP_000619360.1|1074706_1075852_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.0	1.5e-05
WP_001047069.1|1075961_1076831_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000353946.1|1076889_1079499_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	3.3e-117
WP_001044230.1|1079701_1081516_-	O-acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
>prophage 85
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1086635	1090289	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000154921.1|1086635_1090289_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	2.0e-24
>prophage 86
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1100443	1107625	2741466		Staphylococcus_phage(33.33%)	6	NA	NA
WP_000185319.1|1100443_1101373_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	3.7e-39
WP_000138487.1|1101899_1103144_-	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_000167314.1|1103252_1104443_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000838029.1|1104750_1105878_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1106239_1106617_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035058.1|1107031_1107625_-	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
>prophage 87
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1117545	1121173	2741466		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009692.1|1117545_1119021_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	4.5e-47
WP_000046076.1|1119151_1120360_-	NADH dehydrogenase	NA	NA	NA	NA	NA
WP_001143495.1|1120813_1121173_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.7e-14
>prophage 88
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1125216	1127885	2741466		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1125216_1126431_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129659.1|1126427_1127885_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.5	2.6e-39
>prophage 89
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1142699	1160023	2741466	terminase,coat	Staphylococcus_phage(76.19%)	26	NA	NA
WP_000807663.1|1142699_1143941_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	8.2e-111
WP_000205567.1|1144055_1145363_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1145460_1146222_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
WP_001183854.1|1146549_1147401_+	DUF368 domain-containing protein	NA	NA	NA	NA	NA
WP_000752917.1|1147634_1147829_-	CsbD family protein	NA	NA	NA	NA	NA
WP_000382163.1|1148654_1148855_-	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000139423.1|1148841_1148952_-	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001788502.1|1149022_1149175_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_001035631.1|1149548_1150106_+	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
WP_000278085.1|1150183_1150984_-	staphylococcal enterotoxin type B	NA	A0A097PAT7	Streptococcus_pyogenes_phage	49.4	1.0e-53
WP_001293062.1|1151291_1151861_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.3e-100
WP_078064369.1|1151857_1152022_-	pathogenicity island family protein	NA	Q4ZE86	Staphylococcus_phage	90.7	5.7e-20
WP_000771375.1|1152201_1152729_-|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	96.6	5.4e-88
WP_000448775.1|1152779_1152998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000846289.1|1153015_1153594_-	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.9	4.8e-29
WP_001190599.1|1153605_1153947_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	98.2	3.2e-57
WP_001019775.1|1154463_1155105_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	93.9	6.5e-112
WP_000356926.1|1155101_1155482_-	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	96.0	2.5e-66
WP_160192987.1|1155811_1157521_-	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	95.4	0.0e+00
WP_001002712.1|1157534_1158404_-	hypothetical protein	NA	Q4ZE74	Staphylococcus_phage	94.1	1.8e-160
WP_001103954.1|1158470_1158788_-	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	57.0	5.5e-19
WP_000695074.1|1158788_1159172_-	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	89.8	3.0e-56
WP_001231375.1|1159173_1159377_-	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	100.0	1.0e-31
WP_000784891.1|1159361_1159517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000124597.1|1159528_1159801_-	helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	84.4	7.7e-38
WP_000560872.1|1159801_1160023_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JFN1	uncultured_Caudovirales_phage	43.5	2.0e-07
>prophage 90
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1165085	1166111	2741466		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571213.1|1165085_1166111_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	9.4e-28
>prophage 91
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1169427	1174605	2741466		Streptococcus_phage(50.0%)	8	NA	NA
WP_000589549.1|1169427_1169784_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001147952.1|1169927_1170248_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	3.1e-06
WP_000422908.1|1170398_1170938_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150011.1|1171020_1171737_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.1	1.5e-16
WP_000974460.1|1171884_1172307_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1172705_1173200_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255551.1|1173354_1173972_+	amino acid transporter	NA	NA	NA	NA	NA
WP_001802951.1|1174044_1174605_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.4	3.8e-31
>prophage 92
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1178005	1179249	2741466		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1178005_1178206_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_000141557.1|1178562_1179249_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	1.7e-33
>prophage 93
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1188295	1197172	2741466		Staphylococcus_phage(50.0%)	9	NA	NA
WP_000757397.1|1188295_1189024_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.3e-18
WP_001057759.1|1189215_1189362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058299.1|1189377_1189701_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085183.1|1191022_1191487_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	98.7	1.6e-80
WP_001050048.1|1191508_1193881_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.8	4.3e-92
WP_001165959.1|1193914_1194655_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA	NA
WP_000556760.1|1194770_1195004_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1195070_1195529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|1195867_1197172_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 94
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1206343	1212214	2741466		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1206343_1206931_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|1207494_1208439_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|1208549_1209545_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369722.1|1209541_1210453_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1211278_1212214_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 95
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1216661	1219508	2741466		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662677.1|1216661_1219508_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.2	0.0e+00
>prophage 96
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1222826	1223666	2741466		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000753319.1|1222826_1223666_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 97
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1231264	1236970	2741466		Streptococcus_phage(66.67%)	5	NA	NA
WP_160192990.1|1231264_1232347_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	9.9e-44
WP_000686344.1|1232710_1233577_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192949.1|1233720_1234362_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.7	5.3e-37
WP_000258150.1|1234526_1235582_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|1235899_1236970_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 98
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1246249	1269722	2741466		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616840.1|1246249_1247011_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
WP_001245577.1|1247007_1247964_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|1247950_1248922_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|1248960_1249116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1249296_1250268_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855514.1|1250385_1252491_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1252453_1252852_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068501.1|1253652_1254519_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1254538_1255039_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|1255379_1256885_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_031760357.1|1256962_1257064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|1257154_1258072_+	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_000197262.1|1258950_1259493_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663030.1|1259831_1260890_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000180991.1|1261129_1262644_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589248.1|1262636_1263614_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	7.1e-25
WP_000983677.1|1263835_1265617_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525106.1|1265628_1267512_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_000098285.1|1267781_1269722_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.3e-110
>prophage 99
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1272861	1282708	2741466		Pandoravirus(12.5%)	12	NA	NA
WP_001217796.1|1272861_1274013_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
WP_000604514.1|1273996_1274590_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|1274940_1275609_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|1275610_1276030_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1276033_1276747_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_153154919.1|1276845_1277430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093562.1|1277709_1278150_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1278492_1278966_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1278940_1279627_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|1279626_1280682_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702781.1|1280753_1281737_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	43.3	1.5e-62
WP_000931238.1|1281868_1282708_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.5	9.6e-55
>prophage 100
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1294320	1295694	2741466		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000952038.1|1294320_1295694_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	33.6	2.3e-45
>prophage 101
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1300671	1306951	2741466		Bacillus_phage(33.33%)	6	NA	NA
WP_000857598.1|1300671_1302345_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	23.2	3.4e-11
WP_000737160.1|1302341_1303973_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	6.7e-12
WP_000469894.1|1304191_1305067_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|1305238_1305922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148826.1|1305924_1306383_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820897.1|1306384_1306951_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	4.7e-21
>prophage 102
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1313741	1314215	2741466		Pandoravirus(100.0%)	1	NA	NA
WP_000833486.1|1313741_1314215_-	cupin	NA	A0A291AU44	Pandoravirus	39.4	1.6e-14
>prophage 103
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1319477	1320275	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1319477_1320275_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 104
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1325106	1325868	2741466		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|1325106_1325868_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 105
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1330242	1331286	2741466		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_001030772.1|1330242_1331286_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
>prophage 106
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1337809	1338607	2741466		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1337809_1338607_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 107
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1341832	1345791	2741466		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1341832_1343560_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793067.1|1343980_1345276_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|1345392_1345791_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 108
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1352725	1353469	2741466		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|1352725_1353469_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 109
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1366007	1366568	2741466	integrase	Streptococcus_phage(100.0%)	1	1360161:1360175	1370158:1370172
1360161:1360175	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|1366007_1366568_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|1366007_1366568_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
1370158:1370172	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 110
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1379396	1382750	2741466		Tupanvirus(50.0%)	3	NA	NA
WP_001200748.1|1379396_1380407_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.3	5.6e-33
WP_001792725.1|1380905_1381427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000180234.1|1381454_1382750_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 111
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1390322	1391645	2741466		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860592.1|1390322_1391645_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.8	2.6e-107
>prophage 112
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1402949	1403606	2741466		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455256.1|1402949_1403606_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	1.1e-45
>prophage 113
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1407247	1410568	2741466		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001599901.1|1407247_1408303_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.0	3.9e-21
WP_000347061.1|1409167_1410568_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	9.4e-55
>prophage 114
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1434006	1434669	2741466		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067261.1|1434006_1434669_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 115
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1441252	1442440	2741466		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250823.1|1441252_1442440_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.6	4.4e-45
>prophage 116
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1445468	1456422	2741466		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1445468_1447550_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1447672_1448143_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1448208_1448622_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1448719_1448974_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA	NA
WP_001788197.1|1449110_1452707_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_000918667.1|1452870_1456422_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 117
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1460105	1464888	2741466	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1460105_1460654_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1460666_1460849_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1460904_1461048_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872882.1|1461162_1461732_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664737.1|1461812_1462337_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|1462336_1463083_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|1463090_1463495_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631969.1|1463487_1464888_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.8	1.2e-54
>prophage 118
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1470899	1473356	2741466	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897132.1|1470899_1473356_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpC	protease	A0A1C3S747	Escherichia_phage	41.2	1.4e-133
>prophage 119
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1492161	1502432	2741466	tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1492161_1493649_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|1493701_1493794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613722.1|1494187_1494664_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|1494660_1495026_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167944.1|1495003_1495807_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.0	3.0e-21
WP_000057594.1|1496022_1496955_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148598.1|1497133_1498015_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167888.1|1498242_1500336_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1500592_1501132_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176709.1|1501136_1502432_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
>prophage 120
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1511688	1514153	2741466		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1511688_1512654_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_160192997.1|1512800_1514153_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.0	1.1e-23
>prophage 121
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1520058	1523156	2741466	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_001051129.1|1520058_1522032_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.2	1.5e-93
WP_000279926.1|1522316_1523156_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 122
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1527062	1527680	2741466		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272126.1|1527062_1527680_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 123
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1536818	1538516	2741466		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109040.1|1536818_1538516_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.3	1.9e-54
>prophage 124
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1555164	1561402	2741466		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170264.1|1555164_1556169_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.2	1.6e-24
WP_000825530.1|1556500_1557343_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467994.1|1557379_1558039_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569282.1|1558042_1559068_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	3.7e-32
WP_001036648.1|1559361_1560504_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634098.1|1560496_1561402_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	3.8e-49
>prophage 125
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1587347	1590108	2741466		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000072584.1|1587347_1588559_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.2	2.2e-44
WP_000028659.1|1588551_1590108_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
>prophage 126
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1602645	1608094	2741466	transposase	Paenibacillus_phage(25.0%)	5	NA	NA
WP_000159787.1|1602645_1602918_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	1.3e-13
WP_000041880.1|1603316_1604021_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.1	5.8e-29
WP_000551643.1|1604412_1604949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424963.1|1605061_1606603_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264071.1|1606627_1608094_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 127
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1617054	1618578	2741466		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930514.1|1617054_1618578_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 128
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1626892	1633221	2741466		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|1626892_1627396_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1627416_1627713_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052484.1|1627956_1628148_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	1.1e-22
WP_001218732.1|1628233_1629331_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157348.1|1629342_1629546_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_000373073.1|1629575_1630457_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001557587.1|1630610_1631456_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655692.1|1632117_1633221_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.0	3.9e-11
>prophage 129
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1643159	1644002	2741466		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209551.1|1643159_1644002_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.2	3.8e-11
>prophage 130
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1665312	1668046	2741466		Bodo_saltans_virus(50.0%)	2	NA	NA
WP_000280799.1|1665312_1666335_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
WP_000449069.1|1667245_1668046_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.4	5.8e-41
>prophage 131
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1686283	1686961	2741466		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911017.1|1686283_1686961_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	1.6e-31
>prophage 132
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1702635	1707075	2741466		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549287.1|1702635_1707075_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	25.6	6.3e-28
>prophage 133
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1717679	1719341	2741466		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570070.1|1717679_1718339_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
WP_000736784.1|1718390_1719341_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
>prophage 134
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1728139	1729576	2741466		Pandoravirus(100.0%)	1	NA	NA
WP_000164003.1|1728139_1729576_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.7	1.1e-29
>prophage 135
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1733336	1737875	2741466		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000925394.1|1733336_1735076_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	1.5e-62
WP_000608818.1|1735335_1736010_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975351.1|1736153_1737875_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 136
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1747202	1748246	2741466		Synechococcus_phage(100.0%)	1	NA	NA
WP_000645608.1|1747202_1748246_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.9	3.5e-14
>prophage 137
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1755460	1756990	2741466		Vibrio_phage(100.0%)	1	NA	NA
WP_000838205.1|1755460_1756990_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	50.7	4.5e-10
>prophage 138
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1765865	1767371	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008400.1|1765865_1767371_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	6.0e-39
>prophage 139
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1778315	1783674	2741466		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894660.1|1778315_1780565_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
WP_000837116.1|1781152_1782121_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127990.1|1782117_1783674_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 140
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1793884	1795944	2741466		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818915.1|1793884_1794982_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166920.1|1795365_1795944_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.1	9.7e-14
>prophage 141
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1804493	1807681	2741466		Planktothrix_phage(33.33%)	3	NA	NA
WP_000067352.1|1804493_1806086_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	4.1e-22
WP_000794565.1|1806595_1806793_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	43.3	2.1e-05
WP_000960712.1|1806958_1807681_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.8	4.1e-22
>prophage 142
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1811553	1812234	2741466		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571407.1|1811553_1812234_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	2.9e-33
>prophage 143
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1829040	1830225	2741466		Klosneuvirus(100.0%)	1	NA	NA
WP_001084442.1|1829040_1830225_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	2.0e-34
>prophage 144
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1835061	1845345	2741466		Tupanvirus(50.0%)	3	NA	NA
WP_160193029.1|1835061_1842237_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	29.7	4.5e-68
WP_000826862.1|1842683_1843934_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706135.1|1844319_1845345_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.5	8.5e-29
>prophage 145
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1848881	1852053	2741466		Bacillus_virus(50.0%)	4	NA	NA
WP_000590854.1|1848881_1849622_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.1	2.5e-38
WP_000171919.1|1849963_1850476_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356963.1|1850654_1850858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013485.1|1851093_1852053_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 146
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1855394	1857879	2741466		Catovirus(50.0%)	2	NA	NA
WP_000723436.1|1855394_1856540_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	25.9	4.6e-23
WP_000779504.1|1856616_1857879_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.5	4.3e-22
>prophage 147
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1864714	1871279	2741466		Catovirus(50.0%)	6	NA	NA
WP_000413171.1|1864714_1865839_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
WP_001028283.1|1865842_1866952_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459062.1|1866964_1867993_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_000940790.1|1867982_1869806_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.1	5.2e-29
WP_000565304.1|1869825_1870590_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037332.1|1870592_1871279_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
>prophage 148
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1875299	1876475	2741466		Clostridium_phage(100.0%)	1	NA	NA
WP_000469833.1|1875299_1876475_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A7RTT7	Clostridium_phage	27.6	2.0e-29
>prophage 149
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1881914	1882688	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1881914_1882688_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 150
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1890719	1891319	2741466		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1890719_1891319_-	Superoxide dismutase [Mn/Fe] 2	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 151
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1896256	1901353	2741466		Catovirus(50.0%)	6	NA	NA
WP_001793242.1|1896256_1897237_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
WP_001789407.1|1897306_1897429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000183771.1|1897572_1898349_-	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA	NA
WP_000414629.1|1898560_1899187_-	MFS transporter	NA	NA	NA	NA	NA
WP_001015549.1|1899382_1900147_-	bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI	NA	NA	NA	NA	NA
WP_001223713.1|1900150_1901353_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	3.9e-09
>prophage 152
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1909619	1913829	2741466		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570808.1|1909619_1910600_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
WP_001045111.1|1910830_1911823_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924990.1|1911838_1912834_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136633.1|1912830_1913829_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.8	5.2e-15
>prophage 153
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1946936	1948001	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000816133.1|1946936_1948001_-	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	41.8	7.7e-09
>prophage 154
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1955775	1965785	2741466		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|1955775_1956576_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_001104165.1|1956964_1957753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001060140.1|1957753_1959088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|1959080_1960907_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|1960919_1961621_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095328.1|1962823_1964107_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	1.8e-68
WP_000375647.1|1964384_1965785_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 155
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1972475	1981522	2741466	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884332.1|1972475_1973762_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.9	4.5e-88
WP_000177465.1|1974141_1975656_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.4	1.2e-90
WP_000449218.1|1975981_1976794_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819096.1|1976881_1979551_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	2.7e-119
WP_000255578.1|1979587_1981522_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
>prophage 156
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	1991622	1998179	2741466		Faecalibacterium_phage(25.0%)	8	NA	NA
WP_000742837.1|1991622_1992462_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|1992912_1993266_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779134.1|1993333_1993729_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054128.1|1993988_1994558_+	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|1994675_1994876_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
WP_000672033.1|1995267_1995459_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA	NA
WP_000143647.1|1995550_1997431_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA	NA
WP_000154162.1|1997420_1998179_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 157
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2012432	2014145	2741466		Planktothrix_phage(100.0%)	1	NA	NA
WP_000138654.1|2012432_2014145_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.4e-20
>prophage 158
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2019773	2020787	2741466		Faustovirus(100.0%)	1	NA	NA
WP_000639184.1|2019773_2020787_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	25.9	9.6e-09
>prophage 159
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2033126	2033819	2741466		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185863.1|2033126_2033819_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	2.2e-28
>prophage 160
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2059917	2061777	2741466		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125628.1|2059917_2061777_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 161
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2087424	2089175	2741466		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_000143425.1|2087424_2088312_+	sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
WP_000923760.1|2088419_2089175_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
>prophage 162
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2092595	2093093	2741466		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|2092595_2093093_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 163
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2098087	2100471	2741466		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071729.1|2098087_2099938_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	9.3e-236
WP_000173331.1|2099934_2100471_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.0	3.9e-41
>prophage 164
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2105349	2115463	2741466	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000066521.1|2105349_2107059_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
WP_000011688.1|2107336_2107549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001028775.1|2107828_2108272_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_001172341.1|2108465_2110064_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	5.3e-78
WP_001791980.1|2110123_2110453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130051.1|2110748_2112245_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031409.1|2112438_2113329_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001237629.1|2113451_2113868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030072.1|2114125_2115463_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.0e-18
>prophage 165
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2147316	2151107	2741466		Staphylococcus_phage(50.0%)	3	NA	NA
WP_000751262.1|2147316_2148018_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	6.8e-38
WP_000996739.1|2148293_2148782_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379821.1|2149295_2151107_+	O-acetyltransferase OatA	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
>prophage 166
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2159541	2163783	2741466		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_000161369.1|2159541_2160540_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	1.0e-34
WP_000076661.1|2160630_2160837_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024139.1|2161374_2163783_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.8	3.2e-127
>prophage 167
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2173024	2176060	2741466	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001058993.1|2173024_2175130_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
WP_000455988.1|2175538_2176060_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
>prophage 168
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2182486	2188870	2741466		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062663.1|2182486_2184226_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	6.0e-35
WP_000473679.1|2184526_2186593_+	PTS glucoside EIICBA component	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206031.1|2186972_2187383_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240663.1|2187424_2187781_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228167.1|2187901_2188870_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	4.0e-12
>prophage 169
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2198159	2199152	2741466		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_160193015.1|2198159_2199152_-	D-lactate dehydrogenase	NA	M1HYB0	Acanthocystis_turfacea_Chlorella_virus	31.9	6.3e-37
>prophage 170
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2208430	2209126	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000538625.1|2208430_2209126_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	3.0e-38
>prophage 171
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2228004	2228871	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000721336.1|2228004_2228871_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	1.3e-78
>prophage 172
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2236672	2241868	2741466		Streptococcus_phage(50.0%)	3	NA	NA
WP_160193016.1|2236672_2238481_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.3	5.1e-93
WP_000755946.1|2238612_2239005_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000088733.1|2239006_2241868_+	DUF3427 domain-containing protein	NA	Q5YA94	Bacillus_phage	27.9	3.1e-28
>prophage 173
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2249710	2250406	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000217456.1|2249710_2250406_+	oxidoreductase	NA	W8CYX9	Bacillus_phage	35.6	4.3e-08
>prophage 174
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2254960	2255779	2741466		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824948.1|2254960_2255779_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	27.2	1.3e-08
>prophage 175
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2263831	2265389	2741466		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173871.1|2263831_2264647_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	8.8e-13
WP_000598772.1|2264639_2265389_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	9.0e-20
>prophage 176
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2272660	2277089	2741466		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_000923526.1|2272660_2273323_+	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.8	5.5e-21
WP_000072149.1|2273315_2274092_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000026189.1|2274487_2275675_+	DHA family class C beta-lactamase	NA	NA	NA	NA	NA
WP_000700925.1|2275736_2277089_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
>prophage 177
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2280483	2282342	2741466		Mycoplasma_phage(50.0%)	2	NA	NA
WP_000948974.1|2280483_2281710_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
WP_000569120.1|2281706_2282342_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	9.0e-05
>prophage 178
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2300069	2306331	2741466		Bacillus_phage(66.67%)	5	NA	NA
WP_001176863.1|2300069_2301212_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
WP_000779360.1|2301479_2301866_+	GtrA family protein	NA	NA	NA	NA	NA
WP_000482652.1|2301999_2302107_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001064825.1|2302809_2304573_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	2.5e-36
WP_000486487.1|2304597_2306331_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
>prophage 179
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2309792	2315563	2741466		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000971550.1|2309792_2310908_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	1.6e-20
WP_000286875.1|2310918_2311611_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200956.1|2311621_2312089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000783428.1|2312140_2313118_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000916704.1|2313119_2314067_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.5	3.2e-139
WP_000594519.1|2314633_2315563_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
>prophage 180
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2323575	2324307	2741466		Bacillus_virus(100.0%)	1	NA	NA
WP_000615461.1|2323575_2324307_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.1e-25
>prophage 181
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2340956	2342516	2741466		Escherichia_phage(100.0%)	1	NA	NA
WP_000692648.1|2340956_2342516_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 182
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2363844	2364879	2741466		Bacillus_virus(100.0%)	1	NA	NA
WP_000655971.1|2363844_2364879_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 183
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2374723	2378620	2741466		Hokovirus(33.33%)	4	NA	NA
WP_000477338.1|2374723_2376097_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	2.3e-13
WP_000249497.1|2376089_2376764_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_000761395.1|2376899_2377955_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229920.1|2377954_2378620_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.6e-36
>prophage 184
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2382359	2383568	2741466		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|2382359_2383568_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 185
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2395658	2396558	2741466		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524830.1|2395658_2396558_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.7	1.2e-15
>prophage 186
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2403930	2404350	2741466		Bacillus_phage(100.0%)	1	NA	NA
WP_000920239.1|2403930_2404350_-	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.9	2.6e-37
>prophage 187
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2410102	2410984	2741466		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000235289.1|2410102_2410984_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	3.8e-62
>prophage 188
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2418862	2419498	2741466		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|2418862_2419498_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 189
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2432441	2436421	2741466		Staphylococcus_phage(50.0%)	4	NA	NA
WP_011447058.1|2432441_2433080_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JQU5	Staphylococcus_phage	48.1	2.6e-36
WP_000684147.1|2433390_2434515_+	NAD(P)-binding protein	NA	A0A2K9L3K5	Tupanvirus	22.8	9.3e-13
WP_000417018.1|2434606_2435560_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	6.4e-31
WP_000737705.1|2435920_2436421_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 190
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2440338	2441142	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717381.1|2440338_2441142_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.3e-07
>prophage 191
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2460122	2460728	2741466		Pithovirus(100.0%)	1	NA	NA
WP_000913024.1|2460122_2460728_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.1	4.3e-12
>prophage 192
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2472698	2475866	2741466		Leptospira_phage(100.0%)	1	NA	NA
WP_000592307.1|2472698_2475866_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	1.1e-61
>prophage 193
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2499549	2501216	2741466		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389658.1|2499549_2500359_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.0	1.7e-19
WP_000155386.1|2500355_2501216_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
>prophage 194
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2510001	2517657	2741466		Enterobacteria_phage(33.33%)	7	NA	NA
WP_000411031.1|2510001_2511018_+	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	29.7	1.0e-18
WP_000655241.1|2511591_2511774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000130149.1|2512267_2513932_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.9	8.0e-45
WP_000186134.1|2513968_2514673_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_000769705.1|2515056_2515482_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000044362.1|2515776_2516592_+	hydrolase	NA	NA	NA	NA	NA
WP_001044441.1|2516802_2517657_+	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	4.9e-06
>prophage 195
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2521039	2523349	2741466		Staphylococcus_phage(50.0%)	4	NA	NA
WP_001015500.1|2521039_2521888_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
WP_000875476.1|2522120_2522324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001791678.1|2522410_2522572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001557494.1|2522608_2523349_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.9	1.5e-14
>prophage 196
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2529669	2531082	2741466		Pandoravirus(100.0%)	1	NA	NA
WP_000169224.1|2529669_2531082_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	3.0e-48
>prophage 197
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2535045	2536608	2741466		Vibrio_phage(100.0%)	1	NA	NA
WP_000792342.1|2535045_2536608_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.2e-18
>prophage 198
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2546810	2547779	2741466		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989088.1|2546810_2547779_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 199
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2563711	2564620	2741466		Klosneuvirus(100.0%)	1	NA	NA
WP_000167867.1|2563711_2564620_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 200
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2581914	2584734	2741466		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334463.1|2581914_2583720_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.8	5.2e-98
WP_000908182.1|2583951_2584734_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	3.3e-09
>prophage 201
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2595914	2599745	2741466		Clostridium_phage(50.0%)	4	NA	NA
WP_000070866.1|2595914_2596358_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|2596478_2597189_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_001083318.1|2597502_2598165_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242311.1|2598443_2599745_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	3.6e-133
>prophage 202
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2607685	2609296	2741466		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|2607685_2609296_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 203
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2618619	2626369	2741466		Bacillus_virus(25.0%)	9	NA	NA
WP_000273358.1|2618619_2619219_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
WP_000460242.1|2619219_2620296_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248732.1|2620282_2621119_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_015445903.1|2621151_2622249_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.3	2.3e-40
WP_000697334.1|2622245_2622665_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654184.1|2622771_2623296_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|2623322_2624561_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|2624588_2625218_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723418.1|2625241_2626369_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
>prophage 204
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2636772	2637168	2741466		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|2636772_2637168_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 205
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2643439	2644087	2741466		Moumouvirus(100.0%)	1	NA	NA
WP_001187630.1|2643439_2644087_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.0	8.0e-09
>prophage 206
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2651287	2652808	2741466		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|2651287_2652808_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 207
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2667167	2670552	2741466		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2667167_2667530_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_061739989.1|2667879_2668881_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2668999_2669326_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190829.1|2669327_2669807_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041111.1|2669781_2670552_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	2.2e-21
>prophage 208
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2684414	2689138	2741466		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094583.1|2684414_2685944_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_072399972.1|2685973_2686993_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2687114_2687369_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047811.1|2687368_2689138_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.6	7.0e-63
>prophage 209
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2692898	2706959	2741466	tRNA	Moraxella_phage(16.67%)	12	NA	NA
WP_000159042.1|2692898_2693924_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.6	3.4e-62
WP_000106332.1|2694238_2695849_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	28.1	1.9e-19
WP_001792272.1|2695937_2696066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602057.1|2696210_2698139_-	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.2	9.3e-53
WP_001283612.1|2698391_2699027_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_072414299.1|2699381_2700410_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581076.1|2700469_2700694_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052270.1|2700901_2702152_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000790331.1|2702334_2703285_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_000141432.1|2703433_2704918_+	glycoside hydrolase family 32 protein	NA	S6ATV4	Bacillus_phage	26.5	2.3e-19
WP_001253312.1|2704914_2705874_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000688492.1|2706242_2706959_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 210
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2714140	2716117	2741466		uncultured_virus(100.0%)	2	NA	NA
WP_000917289.1|2714140_2714425_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|2714500_2716117_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
>prophage 211
NZ_CP047817	Staphylococcus aureus strain UP_1433 chromosome, complete genome	2741466	2720066	2740996	2741466	integrase	Staphylococcus_phage(97.14%)	37	2722909:2722923	2732612:2732626
WP_000791411.1|2720066_2721122_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000595392.1|2721143_2722160_+	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
2722909:2722923	attL	CTATCATTATCGAAT	NA	NA	NA	NA
WP_000857180.1|2723278_2724316_-|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	98.6	1.4e-175
WP_000427213.1|2724378_2724621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001558608.1|2724631_2725615_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000694772.1|2725714_2725897_-	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	100.0	6.9e-27
WP_000591749.1|2726100_2726442_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000759682.1|2726447_2727380_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
WP_001031454.1|2727395_2728109_-	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_000854072.1|2728242_2728506_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001025404.1|2728521_2728737_+	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000128909.1|2728725_2729055_-	hypothetical protein	NA	M9NS98	Staphylococcus_phage	98.2	5.1e-52
WP_001148605.1|2729105_2729858_+	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_001148856.1|2729873_2730071_+	hypothetical protein	NA	O80075	Staphylococcus_phage	100.0	2.5e-30
WP_000762521.1|2730057_2730438_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001120201.1|2730492_2730816_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2730812_2730974_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2731068_2731371_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2731375_2731636_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|2731644_2731908_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700554.1|2731916_2733860_+	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
2732612:2732626	attR	ATTCGATAATGATAG	NA	NA	NA	NA
WP_000180600.1|2733861_2734782_+	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	100.0	5.1e-166
WP_064135358.1|2734862_2735480_+	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000934759.1|2735480_2735951_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_000148333.1|2735980_2736874_+	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_160193025.1|2737106_2737511_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	99.3	9.3e-72
WP_000101279.1|2737523_2737895_+	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
WP_000111491.1|2737894_2738152_+	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000178987.1|2738148_2738397_+	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_001065108.1|2738411_2738657_+	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000185693.1|2738653_2739190_+	hypothetical protein	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001282077.1|2739226_2739472_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
WP_000195784.1|2739468_2739675_+	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_000595265.1|2739671_2739821_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001557462.1|2739820_2740021_+	DUF1514 domain-containing protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000590122.1|2740048_2740465_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988332.1|2740696_2740996_+	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
