The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	0	24288	2758612	tail,terminase,portal,capsid,head,protease,holin	Staphylococcus_phage(100.0%)	29	NA	NA
WP_000625088.1|0_1662_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000025274.1|1677_2865_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000642728.1|2848_3586_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000154559.1|3609_4755_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000238236.1|4774_5059_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5048_5333_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|5316_5679_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114227.1|5675_6080_+	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	99.3	2.1e-68
WP_000565498.1|6076_6484_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268733.1|6484_7129_+|tail	phage tail protein	tail	A0A1X9H0J2	Staphylococcus_phage	100.0	1.5e-119
WP_071621395.1|7170_7395_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|7444_7795_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_001789580.1|7821_7983_+	hypothetical protein	NA	A0A0H3U330	Staphylococcus_phage	100.0	1.6e-22
WP_001796452.1|8039_12569_+|tail	phage tail tape measure protein	tail	A0A2I6PDK2	Staphylococcus_phage	99.8	0.0e+00
WP_000567408.1|12565_14050_+|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_000582165.1|14065_17851_+	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.5	0.0e+00
WP_001153681.1|17840_17993_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040261.1|18039_18327_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_000539688.1|18384_18681_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|18830_19007_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|19059_19167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|19218_19473_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|19484_20240_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000919350.1|20430_20922_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_020444758.1|21448_21907_+	amidase	NA	R9QTN8	Staphylococcus_phage	98.7	4.9e-85
WP_000727649.1|22001_22451_-	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_000702263.1|23134_23485_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|23537_23798_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|24108_24288_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
>prophage 2
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	30222	32669	2758612		Staphylococcus_phage(100.0%)	3	NA	NA
WP_000991300.1|30222_31119_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000645721.1|31119_31800_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763048.1|31796_32669_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
>prophage 3
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	37916	38318	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000205103.1|37916_38318_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	1.3e-22
>prophage 4
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	42514	44544	2758612		Bacillus_virus(50.0%)	2	NA	NA
WP_000149686.1|42514_43075_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275721.1|43446_44544_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	2.5e-47
>prophage 5
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	48574	50858	2758612		Bacillus_virus(100.0%)	2	NA	NA
WP_000284427.1|48574_50044_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.3	3.2e-106
WP_000164017.1|50036_50858_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	4.4e-68
>prophage 6
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	54545	61312	2758612		Gordonia_phage(33.33%)	5	NA	NA
WP_000572878.1|54545_55841_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|55949_56252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272062.1|56423_57116_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992924.1|57112_59305_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774567.1|59308_61312_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	7.5e-114
>prophage 7
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	68370	73398	2758612		Catovirus(33.33%)	5	NA	NA
WP_001231459.1|68370_69318_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.5e-16
WP_001147862.1|69398_70760_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.8	1.4e-103
WP_000548781.1|70929_71460_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140176.1|71706_72777_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613738.1|72843_73398_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
>prophage 8
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	76850	77264	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001622129.1|76850_77264_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	39.8	5.1e-17
>prophage 9
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	82177	82807	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|82177_82807_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 10
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	98296	100033	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_000597236.1|98296_100033_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.3e-53
>prophage 11
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	116437	117166	2758612		Planktothrix_phage(100.0%)	1	NA	NA
WP_001144055.1|116437_117166_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
>prophage 12
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	128048	128393	2758612		Streptococcus_phage(100.0%)	1	NA	NA
WP_000290301.1|128048_128393_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
>prophage 13
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	138026	138767	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000216874.1|138026_138767_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
>prophage 14
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	146495	150759	2758612		Staphylococcus_phage(80.0%)	5	NA	NA
WP_010922839.1|146495_147278_+	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_031928241.1|147558_148278_+	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	4.0e-25
WP_000713846.1|148312_149041_+	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	38.6	2.5e-27
WP_000764689.1|149194_149965_+	staphylococcal enterotoxin type C1/U	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.2	1.4e-44
WP_001236362.1|150003_150759_+	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
>prophage 15
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	154011	155141	2758612	transposase	Paenibacillus_phage(100.0%)	1	NA	NA
WP_098686295.1|154011_155141_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.3	5.2e-80
>prophage 16
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	158656	206361	2758612	protease,tRNA,transposase	Staphylococcus_phage(91.67%)	44	NA	NA
WP_098686295.1|158656_159785_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.3	5.2e-80
WP_000627532.1|159987_160329_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	91.2	4.8e-53
WP_000669031.1|160369_160996_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.1	3.9e-85
WP_000070666.1|161071_162067_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.2	1.9e-73
WP_001796416.1|162147_162798_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	70.4	1.3e-30
WP_072468941.1|163100_163556_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	2.3e-79
WP_000348383.1|163714_165193_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	95.1	1.0e-277
WP_000778530.1|165197_166199_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	3.1e-185
WP_000718111.1|166195_166453_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	97.6	1.0e-44
WP_000672013.1|166518_166992_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_001827685.1|166996_167743_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	97.6	6.6e-140
WP_000109912.1|168122_169715_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_000933821.1|170086_171280_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000366165.1|171404_172313_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.7	9.8e-138
WP_000453324.1|172524_173358_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	3.5e-158
WP_000623468.1|173607_173961_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	91.5	2.7e-19
WP_001200545.1|173957_174323_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	6.2e-59
WP_000091443.1|174578_174881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|175139_175853_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000492904.1|176588_177209_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001168913.1|177375_178011_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001030473.1|178307_178751_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	77.9	1.1e-49
WP_001152694.1|178737_179181_-	competence protein ComK	NA	NA	NA	NA	NA
WP_031928201.1|179293_179764_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	84.5	6.5e-69
WP_000384171.1|179962_180187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032834.1|180461_181316_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989113.1|181402_182695_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	94.9	3.0e-217
WP_000221174.1|182694_183009_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	96.2	1.8e-51
WP_001261660.1|183651_185154_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_029549219.1|185647_186679_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	1.2e-195
WP_000493880.1|186685_187318_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	97.6	2.1e-110
WP_001159030.1|187328_188510_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_001008551.1|188522_188987_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001196354.1|189108_190110_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_014937042.1|190221_190341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|190343_191171_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|191741_192143_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764418.1|192259_192823_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	98.4	4.1e-102
WP_000526542.1|192819_193773_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025064.1|193882_195064_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	9.6e-218
WP_001108717.1|195355_197770_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	98.7	0.0e+00
WP_000836464.1|197791_198103_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	97.1	6.9e-51
WP_064135570.1|198427_204976_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	87.6	2.3e-292
WP_000284998.1|205092_206361_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	96.4	1.3e-55
>prophage 17
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	217477	222805	2758612		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091394.1|217477_218335_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	99.3	4.4e-71
WP_001048366.1|218363_218960_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118322.1|218980_222805_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	7.7e-83
>prophage 18
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	231545	233252	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862076.1|231545_233252_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.6	4.7e-274
>prophage 19
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	239857	242488	2758612	protease,tRNA	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186035.1|239857_241120_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.3	9.3e-86
WP_160186293.1|241213_242488_-|protease	serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 20
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	246256	250391	2758612		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808829.1|246256_247861_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	99.5	3.5e-114
WP_000291426.1|247847_249008_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553931.1|249121_249568_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174269.1|249647_250391_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	29.9	1.4e-17
>prophage 21
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	268222	271420	2758612		Streptomyces_phage(100.0%)	1	NA	NA
WP_000226934.1|268222_271420_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.3	1.1e-135
>prophage 22
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	276353	278111	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232655.1|276353_278111_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	3.3e-41
>prophage 23
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	282995	291159	2758612		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080026.1|282995_283700_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_072468943.1|283699_285361_+	PAS domain-containing protein	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_000849447.1|285860_287348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038313.1|287640_290271_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114464.1|290286_291159_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	37.4	1.7e-41
>prophage 24
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	295074	306228	2758612	protease,tRNA	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808621.1|295074_295995_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_014937037.1|296087_296210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435132.1|296407_298345_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	7.8e-116
WP_000049154.1|298771_300265_+	amino acid permease	NA	NA	NA	NA	NA
WP_001807711.1|300493_301021_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.8	2.4e-11
WP_001125540.1|301049_301250_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|301296_301653_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032657.1|301794_302403_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001280025.1|302421_303351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|303355_303466_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127572.1|303513_304815_+	trigger factor	NA	NA	NA	NA	NA
WP_000472293.1|304965_306228_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	61.7	1.1e-139
>prophage 25
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	315796	318427	2758612	tRNA	Catovirus(100.0%)	1	NA	NA
WP_000425356.1|315796_318427_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.4	2.8e-153
>prophage 26
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	328360	363968	2758612	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_001005764.1|328360_329365_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_031928192.1|329366_330392_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|330414_331554_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|331572_331833_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|332107_334387_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000594987.1|334590_336864_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	7.3e-65
WP_000364543.1|336885_337404_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.8	2.1e-28
WP_160186294.1|337832_340022_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869979.1|340033_340486_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717800.1|340482_341358_+	cell wall amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|341818_343081_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044803.1|343096_344863_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	26.9	4.9e-16
WP_001827648.1|345194_345323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682645.1|345322_346096_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102740.1|346256_347531_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.8e-105
WP_000704122.1|347615_348038_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|348137_348320_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|348359_348506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985881.1|348742_349756_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409162.1|350067_351210_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.0	1.1e-32
WP_000066103.1|351210_352329_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567023.1|353017_353686_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283324.1|353687_356165_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000734073.1|356507_359138_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|359200_359461_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|359464_359893_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|359907_360216_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342266.1|360500_361139_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	1.6e-09
WP_000137775.1|361141_362065_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|362076_363345_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|363344_363968_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 27
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	370645	373033	2758612		Lactococcus_phage(50.0%)	2	NA	NA
WP_000542326.1|370645_371866_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	34.6	8.5e-52
WP_001622271.1|372280_373033_+	enterotoxin	NA	A0EX09	Staphylococcus_phage	40.9	1.9e-49
>prophage 28
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	380302	386466	2758612		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|380302_380764_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_000953292.1|380822_382970_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.8	3.5e-32
WP_001282573.1|383026_384001_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|384045_384297_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_043859323.1|384642_386466_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 29
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	389900	393008	2758612		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034717.1|389900_391733_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_001119019.1|391868_393008_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.0	3.0e-27
>prophage 30
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	399477	400425	2758612		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|399477_400425_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 31
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	403479	417207	2758612	tRNA	Klosneuvirus(25.0%)	13	NA	NA
WP_001030077.1|403479_404871_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.5	1.6e-46
WP_072468919.1|405205_405829_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411298.1|405839_406658_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217237.1|406718_408518_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	1.3e-53
WP_001283055.1|408741_409848_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624564.1|409978_410656_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683915.1|410658_411759_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	3.0e-08
WP_001062177.1|411872_413219_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000924214.1|413228_414119_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001213908.1|414244_415030_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564318.1|415071_415935_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095258.1|415921_416332_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|416607_417207_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 32
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	423380	424004	2758612		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223009.1|423380_424004_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	2.1e-30
>prophage 33
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	429548	432360	2758612		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019698.1|429548_430895_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.4	5.3e-63
WP_000202176.1|430887_432360_+	glycine dehydrogenase subunit 2	NA	E3SN07	Prochlorococcus_phage	41.3	2.8e-81
>prophage 34
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	439859	446429	2758612		Indivirus(66.67%)	6	NA	NA
WP_001286934.1|439859_441197_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.2e-43
WP_000159865.1|441189_441420_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183379.1|441397_442279_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.2	1.5e-10
WP_001124985.1|442709_443162_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942206.1|443177_444857_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291530.1|445007_446429_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.7	5.1e-40
>prophage 35
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	453256	454663	2758612		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|453256_454663_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 36
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	459309	460794	2758612		Cyanophage(100.0%)	1	NA	NA
WP_000105075.1|459309_460794_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 37
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	466458	480884	2758612		Bacillus_phage(28.57%)	14	NA	NA
WP_000447733.1|466458_467346_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183432.1|467423_467930_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273372.1|468021_468753_+	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368647.1|468745_469288_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159580.1|469280_470018_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064074.1|470150_470876_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	6.0e-45
WP_000987760.1|470856_472608_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.3	1.3e-21
WP_001622322.1|472859_473789_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001033750.1|473781_475944_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	53.5	7.0e-49
WP_000476856.1|476034_476949_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001186906.1|477554_478100_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001151999.1|478205_478454_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	6.4e-15
WP_042744305.1|478561_479515_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000902118.1|479504_480884_+	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
>prophage 38
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	490310	495800	2758612		Bacillus_phage(25.0%)	7	NA	NA
WP_001043863.1|490310_490583_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450565.1|491013_491586_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774683.1|491588_492314_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001827577.1|492330_493275_+	heptaprenyl diphosphate synthase subunit II	NA	A0A1V0SE37	Indivirus	24.0	2.1e-10
WP_000442481.1|493366_493816_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	5.4e-28
WP_000789524.1|494025_494226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269939.1|494633_495800_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.3	2.6e-34
>prophage 39
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	499462	500038	2758612		Bacillus_virus(100.0%)	1	NA	NA
WP_000005212.1|499462_500038_+	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
>prophage 40
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	503424	510931	2758612	tRNA	unidentified_phage(25.0%)	5	NA	NA
WP_000361547.1|503424_504627_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	1.9e-35
WP_000049921.1|504613_505585_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_042744307.1|505608_508302_+	ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858795.1|508623_509916_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	4.3e-54
WP_000362215.1|510244_510931_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	31.4	1.2e-07
>prophage 41
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	514622	515249	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_001108885.1|514622_515249_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.7e-24
>prophage 42
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	524573	525452	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_001133028.1|524573_525452_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.1e-19
>prophage 43
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	563837	573226	2758612		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282160.1|563837_564542_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_001795441.1|564786_564981_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_001165814.1|564992_565244_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000404632.1|565280_566405_+	virulence factor	NA	NA	NA	NA	NA
WP_000995282.1|566420_566858_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934885.1|567281_568238_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175742.1|568437_568917_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.2	4.5e-73
WP_000166049.1|568931_569771_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	76.5	3.0e-48
WP_000159902.1|569856_570390_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913317.1|570382_570811_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473654.1|570822_571323_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|571322_571544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342148.1|571735_573226_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.3e-22
>prophage 44
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	576635	578647	2758612		Bacillus_phage(50.0%)	2	NA	NA
WP_160186299.1|576635_577295_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166793.1|577291_578647_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 45
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	586317	587109	2758612		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|586317_587109_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 46
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	590642	596253	2758612	protease,lysis	Lactobacillus_phage(33.33%)	8	NA	NA
WP_000138414.1|590642_591779_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.0	2.2e-33
WP_001796534.1|591810_592440_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	lysis	NA	NA	NA	NA
WP_001215908.1|592458_592728_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|592890_593199_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|593369_593570_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876215.1|593766_594168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000275771.1|594292_594910_+|protease	protease	protease	NA	NA	NA	NA
WP_000216938.1|594987_596253_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.5	9.5e-14
>prophage 47
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	604096	605698	2758612		Klosneuvirus(100.0%)	1	NA	NA
WP_000942303.1|604096_605698_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 48
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	610123	617718	2758612		Indivirus(25.0%)	8	NA	NA
WP_000194851.1|610123_610975_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.2	2.6e-15
WP_000974853.1|610981_611623_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077577.1|611762_613577_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.0	1.1e-153
WP_000171798.1|613781_614126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000469973.1|614454_615441_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000946381.1|615433_616264_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000052306.1|616250_617024_+	ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	25.7	2.2e-05
WP_000571261.1|617016_617718_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	9.0e-14
>prophage 49
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	625223	627578	2758612		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000153718.1|625223_626006_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	36.3	1.3e-26
WP_000173848.1|626007_627006_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.6	3.8e-34
WP_000604801.1|627011_627578_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	31.8	5.0e-23
>prophage 50
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	631897	633160	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_000283026.1|631897_633160_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.6	2.6e-96
>prophage 51
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	642818	647212	2758612		Bacillus_phage(50.0%)	2	NA	NA
WP_001289594.1|642818_645221_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.1	5.1e-93
WP_025173910.1|645220_647212_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	1.0e-115
>prophage 52
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	652835	654482	2758612		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|652835_654482_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 53
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	658151	659273	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691306.1|658151_659273_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 54
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	663422	669077	2758612		Phage_Wrath(25.0%)	7	NA	NA
WP_001208755.1|663422_664046_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	5.9e-17
WP_000380739.1|664425_665289_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	9.1e-16
WP_001791425.1|665362_665467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000688134.1|665463_666441_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.4	2.3e-185
WP_001085655.1|666597_666867_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|667319_667469_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000082546.1|667559_669077_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	1.8e-91
>prophage 55
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	679213	683489	2758612		Bacillus_phage(50.0%)	6	NA	NA
WP_000841351.1|679213_679747_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027140.1|679885_680074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000623460.1|680186_680789_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670290.1|680785_681877_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000243879.1|681880_682612_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_001796717.1|682586_683489_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.8	3.7e-20
>prophage 56
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	689269	703753	2758612	portal,integrase,head,terminase	Staphylococcus_phage(57.14%)	24	685449:685466	709914:709931
685449:685466	attL	ATTCAATCATTAATATAT	NA	NA	NA	NA
WP_078103007.1|689269_690262_-|head	head morphogenesis protein	head	Q4ZE35	Staphylococcus_virus	70.4	5.3e-52
WP_108720682.1|690811_692239_-|portal	phage portal protein	portal	Q4ZE36	Staphylococcus_virus	71.9	3.6e-195
WP_000207540.1|692251_693526_-|terminase	PBSX family phage terminase large subunit	terminase	Q4ZE37	Staphylococcus_virus	76.4	4.2e-195
WP_000090969.1|693512_693941_-	helix-turn-helix domain-containing protein	NA	A1EAE0	Streptococcus_phage	45.1	1.1e-25
WP_000653928.1|694092_694581_-	hypothetical protein	NA	R9TMH4	Paenibacillus_phage	27.7	1.9e-07
WP_000835356.1|694857_695322_-	hypothetical protein	NA	C9E2P0	Enterococcus_phage	43.7	2.5e-20
WP_025174108.1|695318_695426_-	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	84.4	1.4e-06
WP_000185174.1|695567_696098_-	nucleotide pyrophosphohydrolase	NA	A0A1P8VVP1	Streptococcus_phage	39.1	8.0e-23
WP_000860977.1|696090_696402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000714365.1|696407_696566_-	hypothetical protein	NA	A0A0E3T9L7	Staphylococcus_phage	90.4	7.9e-19
WP_000945229.1|696580_696871_-	hypothetical protein	NA	A0A223LIA9	Staphylococcus_phage	58.1	5.5e-18
WP_043859346.1|696871_697786_-	DnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	51.3	1.1e-48
WP_076679818.1|697799_698294_-	single-stranded DNA-binding protein	NA	A7TWM8	Staphylococcus_phage	94.0	9.9e-84
WP_000818736.1|698374_699154_-	ATP-binding protein	NA	A0A1W6JPW0	Staphylococcus_phage	88.8	9.3e-129
WP_001004328.1|699154_699691_-	hypothetical protein	NA	A0A0H3U480	Staphylococcus_phage	81.4	1.1e-75
WP_000786635.1|699695_699962_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.9e-18
WP_000786995.1|699951_700269_-	DUF2482 family protein	NA	W5RAK4	Staphylococcus_phage	80.6	1.6e-39
WP_000072840.1|700355_700517_-	DUF1270 family protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
WP_000789021.1|700687_700969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000842951.1|701016_701229_-	DUF739 family protein	NA	A0A2I6PDH8	Staphylococcus_phage	83.3	6.8e-26
WP_001083979.1|701390_701756_+	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	47.9	1.8e-21
WP_000554409.1|701902_702286_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001183755.1|702297_702993_+	hypothetical protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	51.5	2.1e-07
WP_000146714.1|703045_703753_+|integrase	tyrosine-type recombinase/integrase	integrase	V9QKF1	Oenococcus_phage	26.2	4.7e-10
709914:709931	attR	ATATATTAATGATTGAAT	NA	NA	NA	NA
>prophage 57
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	708370	708847	2758612		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448081.1|708370_708847_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	2.7e-22
>prophage 58
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	714790	721272	2758612		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103747.1|714790_715609_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	3.1e-26
WP_001072707.1|716083_716626_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516248.1|716631_718641_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.5	3.1e-59
WP_000073338.1|718653_721272_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.5	6.5e-41
>prophage 59
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	730686	731730	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|730686_731730_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 60
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	735930	741473	2758612		Bacillus_virus(33.33%)	4	NA	NA
WP_000664766.1|735930_737217_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	27.9	6.7e-15
WP_000089944.1|737216_738482_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	2.0e-40
WP_064135527.1|738512_739226_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_072468899.1|739229_741473_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	9.1e-84
>prophage 61
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	746613	758428	2758612	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|746613_747585_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282307.1|747599_748517_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|748686_749037_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_160186302.1|749423_751541_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	4.0e-25
WP_042744191.1|751545_751863_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|751859_752144_-	YlxR family protein	NA	NA	NA	NA	NA
WP_064135526.1|752164_753340_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036631.1|753360_753828_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_078064710.1|754117_758428_-	PolC-type DNA polymerase III	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 62
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	762701	763472	2758612		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473705.1|762701_763472_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 63
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	768245	781918	2758612	protease,tRNA	Erwinia_phage(16.67%)	11	NA	NA
WP_000379054.1|768245_769649_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	4.9e-27
WP_000072681.1|769714_770260_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015604.1|770256_771153_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	4.6e-31
WP_042744193.1|771570_772878_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_001622395.1|773033_775109_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	2.3e-105
WP_043859344.1|775282_776155_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000672866.1|776326_777571_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_160186303.1|777598_778717_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	1.2e-49
WP_000110245.1|778945_779854_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.0e-17
WP_001020801.1|779875_781042_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176404.1|781150_781918_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 64
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	795301	797358	2758612		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_160186304.1|795301_796033_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	1.0e-23
WP_000426914.1|796147_796381_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|796623_797358_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 65
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	807728	809723	2758612		Moumouvirus(100.0%)	1	NA	NA
WP_043859343.1|807728_809723_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 66
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	812870	813806	2758612	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_042744198.1|812870_813806_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 67
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	818809	821066	2758612		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_160186305.1|818809_820009_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.4	1.3e-41
WP_000933956.1|820224_820443_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368225.1|820442_821066_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	6.1e-22
>prophage 68
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	824432	825044	2758612		Pandoravirus(100.0%)	1	NA	NA
WP_001040247.1|824432_825044_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	2.1e-27
>prophage 69
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	829011	833622	2758612		Halovirus(33.33%)	4	NA	NA
WP_001190913.1|829011_830112_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_000767035.1|830113_831388_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016170.1|831405_832287_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	6.0e-31
WP_001178613.1|832314_833622_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 70
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	837555	840309	2758612	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_064135524.1|837555_840309_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	28.0	6.1e-90
>prophage 71
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	859880	860069	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245799.1|859880_860069_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	85.2	8.5e-20
>prophage 72
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	868953	872997	2758612		Staphylococcus_phage(66.67%)	6	NA	NA
WP_000192697.1|868953_869166_-	hypothetical protein	NA	Q4ZBW5	Staphylococcus_virus	69.2	8.1e-19
WP_000765705.1|869149_869296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064135522.1|869963_870923_+	beta-channel forming cytolysin	NA	A0A2H4PQH7	Staphylococcus_phage	30.6	1.5e-35
WP_000231332.1|871376_871610_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032820.1|872218_872404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000669539.1|872646_872997_-	complement inhibitor SCIN family protein	NA	A7TWS0	Staphylococcus_phage	51.8	6.4e-21
>prophage 73
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	884469	889027	2758612		Staphylococcus_phage(33.33%)	3	NA	NA
WP_001018928.1|884469_884784_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249280.1|884956_887305_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.3	8.5e-16
WP_000161953.1|887314_889027_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	1.8e-15
>prophage 74
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	893972	895031	2758612	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003566.1|893972_895031_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
>prophage 75
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	906975	909872	2758612		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_000401377.1|906975_907458_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263798.1|907459_908002_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814569.1|908071_908461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|908463_908718_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757595.1|908942_909872_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	1.3e-12
>prophage 76
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	921390	923238	2758612		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|921390_923238_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 77
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	931373	935014	2758612		Mycoplasma_phage(50.0%)	4	NA	NA
WP_000433547.1|931373_932468_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.8e-37
WP_001020625.1|932480_933020_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455589.1|933163_933439_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|933607_935014_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
>prophage 78
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	939653	940205	2758612		Synechococcus_phage(100.0%)	1	NA	NA
WP_000957036.1|939653_940205_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.2	1.6e-13
>prophage 79
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	946322	950701	2758612		Bacillus_virus(50.0%)	5	NA	NA
WP_001289619.1|946322_946556_+	glutaredoxin family protein	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040046.1|946791_948510_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|948512_948779_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505969.1|948932_949475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000685080.1|949528_950701_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.6	2.0e-74
>prophage 80
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	953816	968577	2758612		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921979.1|953816_955217_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	29.2	2.0e-12
WP_000273264.1|955209_956016_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101904.1|956281_957529_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_064135517.1|957550_959029_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	2.4e-77
WP_000238657.1|959043_959610_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.6	8.0e-29
WP_000030827.1|959612_960641_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	1.2e-62
WP_000483713.1|960633_962118_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000032752.1|962096_964286_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000666803.1|964278_964950_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|964951_965215_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174048.1|965214_965919_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.2	4.0e-46
WP_001010404.1|965922_967047_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_001622461.1|967033_967516_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_000225844.1|967716_968577_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.8	2.0e-39
>prophage 81
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	979011	982776	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074512.1|979011_982776_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	8.7e-55
>prophage 82
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	986427	987429	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000676571.1|986427_987429_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	31.7	1.1e-15
>prophage 83
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	995734	999260	2758612		Enterococcus_phage(50.0%)	6	NA	NA
WP_001796516.1|995734_996025_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	38.0	3.4e-07
WP_001794249.1|996088_996220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081317.1|996266_997226_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766009.1|997717_998074_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001796515.1|998240_998531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571169.1|998618_999260_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	3.8e-19
>prophage 84
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1009400	1014611	2758612	protease	Pithovirus(33.33%)	3	NA	NA
WP_001796514.1|1009400_1011725_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_031928147.1|1011943_1012747_-	TerC family protein	NA	A0A068EP98	Bacillus_phage	39.5	5.6e-28
WP_001049954.1|1013048_1014611_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.3e-36
>prophage 85
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1033537	1035346	2758612		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082725.1|1033537_1035346_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
>prophage 86
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1041160	1043130	2758612		Bacillus_virus(100.0%)	2	NA	NA
WP_000427779.1|1041160_1042141_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.1	2.7e-16
WP_001067039.1|1042143_1043130_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.8e-15
>prophage 87
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1046781	1048795	2758612		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_001258350.1|1046781_1047723_-	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	2.1e-05
WP_000140054.1|1047712_1048795_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	2.9e-19
>prophage 88
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1056727	1061354	2758612		Agrobacterium_phage(50.0%)	2	NA	NA
WP_000353969.1|1056727_1059337_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001044231.1|1059539_1061354_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
>prophage 89
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1066645	1070299	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_000154909.1|1066645_1070299_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.7	3.5e-24
>prophage 90
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1081054	1088214	2758612		Staphylococcus_phage(33.33%)	6	NA	NA
WP_000185324.1|1081054_1081984_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	2.8e-39
WP_000138487.1|1082488_1083733_-	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_000167314.1|1083841_1085032_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000838022.1|1085339_1086467_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1086827_1087205_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035064.1|1087620_1088214_-	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.5e-25
>prophage 91
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1098148	1101776	2758612		Mycoplasma_phage(50.0%)	3	NA	NA
WP_064135512.1|1098148_1099624_-	aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	36.7	9.0e-48
WP_000046076.1|1099754_1100963_-	NADH dehydrogenase	NA	NA	NA	NA	NA
WP_001143497.1|1101416_1101776_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.1e-14
>prophage 92
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1105820	1108489	2758612		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1105820_1107035_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129643.1|1107031_1108489_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.5	8.9e-40
>prophage 93
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1120193	1168714	2758612	tail,terminase,plate,portal,integrase,head,capsid,holin	Staphylococcus_phage(65.15%)	69	1113291:1113306	1171109:1171124
1113291:1113306	attL	CTTTTGGTAATTCTTT	NA	NA	NA	NA
WP_000382163.1|1120193_1120394_-	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000139423.1|1120380_1120491_-	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001788502.1|1120561_1120714_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_001148118.1|1120956_1122402_-	CHAP domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	99.0	1.7e-293
WP_000354120.1|1122382_1122820_-|holin	phage holin	holin	B2ZZ05	Staphylococcus_phage	97.9	2.6e-72
WP_000398878.1|1122875_1123271_-	hypothetical protein	NA	Q4ZBP5	Staphylococcus_phage	100.0	2.7e-68
WP_000276631.1|1123275_1124514_-|plate	BppU family phage baseplate upper protein	plate	E0Y3M8	Staphylococcus_virus	99.3	3.8e-209
WP_160186310.1|1124526_1126425_-	CHAP domain-containing protein	NA	E0Y3M7	Staphylococcus_virus	99.4	0.0e+00
WP_000466785.1|1126561_1126861_-	DUF2951 family protein	NA	A0EWU6	Staphylococcus_virus	91.9	1.9e-42
WP_015990323.1|1126901_1127075_-	XkdX family protein	NA	B2ZZ00	Staphylococcus_phage	100.0	1.0e-27
WP_031764626.1|1127084_1127462_-	DUF2977 domain-containing protein	NA	W5R9M2	Staphylococcus_phage	98.4	5.8e-60
WP_000259634.1|1127461_1129285_-|plate	phage baseplate upper protein	plate	B1H3M3	Staphylococcus_phage	100.0	0.0e+00
WP_044120071.1|1129284_1131195_-	hypothetical protein	NA	A1KX41	Staphylococcus_virus	99.2	0.0e+00
WP_000156404.1|1131209_1133111_-	peptidase	NA	Q4ZDD8	Staphylococcus_virus	100.0	0.0e+00
WP_000350680.1|1133119_1134067_-|tail	phage tail family protein	tail	Q8SDT6	Staphylococcus_phage	100.0	2.1e-183
WP_031824895.1|1134079_1137544_-	membrane protein	NA	Q4ZDL9	Staphylococcus_virus	99.9	8.6e-267
WP_000105584.1|1137560_1137905_-	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_001100163.1|1137934_1138300_-	hypothetical protein	NA	Q8SDT9	Staphylococcus_phage	100.0	2.8e-59
WP_000002583.1|1138361_1138943_-|tail	phage major tail protein, TP901-1 family	tail	Q8SDU0	Staphylococcus_phage	100.0	4.9e-106
WP_031824894.1|1138961_1139345_-	hypothetical protein	NA	Q8SDU1	Staphylococcus_phage	98.4	1.0e-67
WP_001017815.1|1139356_1139704_-	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_001268309.1|1139703_1140006_-	hypothetical protein	NA	B2ZYY8	Staphylococcus_phage	100.0	1.5e-50
WP_000208960.1|1140002_1140335_-|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001114085.1|1140343_1140631_-	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	100.0	4.7e-46
WP_000438504.1|1140652_1141627_-|capsid	phage major capsid protein	capsid	A0EWT0	Staphylococcus_virus	100.0	1.3e-183
WP_064135509.1|1141640_1142252_-	DUF4355 domain-containing protein	NA	A0EWS9	Staphylococcus_virus	99.5	9.2e-39
WP_031824893.1|1142386_1142557_-	hypothetical protein	NA	Q4ZDF2	Staphylococcus_virus	98.2	1.3e-22
WP_031824892.1|1142629_1143625_-|head	phage head morphogenesis protein	head	E0Y3K7	Staphylococcus_virus	99.7	1.3e-183
WP_031768183.1|1143631_1145167_-|portal	phage portal protein	portal	Q4ZDV9	Staphylococcus_virus	99.8	2.9e-291
WP_000169946.1|1145177_1146455_-|terminase	PBSX family phage terminase large subunit	terminase	A0EWS5	Staphylococcus_virus	100.0	3.0e-249
WP_001003271.1|1146441_1146882_-|terminase	terminase small subunit	terminase	I1W650	Staphylococcus_phage	100.0	4.8e-74
WP_160186311.1|1147068_1147488_-	transcriptional regulator	NA	I1W651	Staphylococcus_phage	99.3	3.1e-70
WP_000990003.1|1147502_1147649_-	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	97.9	2.9e-15
WP_011447035.1|1147649_1147838_-	transcriptional activator RinB	NA	Q77FU4	Staphylococcus_phage	100.0	5.1e-25
WP_001125015.1|1147825_1148026_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000195797.1|1148000_1148189_-	DUF1381 domain-containing protein	NA	A0A2I6PEH2	Staphylococcus_phage	96.7	4.3e-24
WP_000185690.1|1148225_1148762_-	hypothetical protein	NA	Q9MBR0	Staphylococcus_prophage	99.4	4.6e-95
WP_001065090.1|1148754_1149003_-	DUF1024 family protein	NA	C8CH04	Staphylococcus_phage	97.6	5.9e-37
WP_000132199.1|1149016_1149259_-	hypothetical protein	NA	M1T302	Staphylococcus_phage	98.8	8.6e-41
WP_000536052.1|1149262_1149622_-	hypothetical protein	NA	B7T0B4	Staphylococcus_virus	67.2	5.6e-36
WP_001187269.1|1149622_1149808_-	DUF3113 family protein	NA	A0A2I6PDN7	Staphylococcus_phage	96.7	1.0e-25
WP_000049809.1|1149812_1150217_-	DUF1064 domain-containing protein	NA	Q4ZBD8	Staphylococcus_virus	97.8	1.5e-66
WP_001123694.1|1150226_1150436_-	DUF3269 family protein	NA	A0A0N9BAW8	Staphylococcus_phage	93.2	5.3e-31
WP_000803054.1|1150603_1151383_-	ATP-binding protein	NA	Q9G022	Staphylococcus_virus	99.6	7.1e-145
WP_000139436.1|1151394_1152138_-	alpha/beta hydrolase	NA	A0A2I6PDA9	Staphylococcus_phage	99.6	2.5e-115
WP_000240896.1|1152130_1152895_-	AP2 domain-containing protein	NA	A0A2I6PDA5	Staphylococcus_phage	99.2	3.5e-144
WP_031864821.1|1152894_1153560_-	phi PV83 orf 19-like protein	NA	Q9G025	Staphylococcus_virus	99.5	1.4e-125
WP_011447037.1|1153572_1154073_-	single-strand DNA-binding protein	NA	A7TWM8	Staphylococcus_phage	100.0	7.2e-90
WP_000137071.1|1154156_1154936_-	ATP-binding protein	NA	Q8SDW5	Staphylococcus_phage	100.0	2.5e-142
WP_000999048.1|1154936_1155473_-	hypothetical protein	NA	A0A2I6PD93	Staphylococcus_phage	100.0	1.7e-81
WP_025175142.1|1155485_1155746_-	DUF1108 family protein	NA	G4KNN5	Staphylococcus_phage	96.5	2.4e-41
WP_000829610.1|1155750_1156068_-	hypothetical protein	NA	A0A2I6PEL3	Staphylococcus_phage	100.0	3.9e-33
WP_000048124.1|1156156_1156318_-	DUF1270 family protein	NA	C7F7L3	Staphylococcus_phage	100.0	1.9e-20
WP_000594793.1|1156310_1156532_-	hypothetical protein	NA	B2ZYU8	Staphylococcus_phage	98.6	1.9e-31
WP_001807461.1|1156603_1157269_+	hypothetical protein	NA	Q9G033	Staphylococcus_virus	99.5	1.1e-117
WP_000187184.1|1157397_1157622_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001148575.1|1157622_1158414_-	phage antirepressor KilAC domain-containing protein	NA	Q8SDX0	Staphylococcus_phage	99.6	2.5e-145
WP_000394020.1|1158602_1158806_-	hypothetical protein	NA	A0A0E3XBM9	Staphylococcus_phage	100.0	4.7e-32
WP_001014907.1|1158821_1159061_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J3I3	uncultured_Caudovirales_phage	88.5	1.2e-31
WP_000142628.1|1159252_1159927_+	LexA family transcriptional regulator	NA	A0A1W6JPS3	Staphylococcus_phage	92.0	2.3e-115
WP_000661436.1|1159974_1160700_+	hypothetical protein	NA	A0A0F6N4L7	Staphylococcus_phage	98.8	8.4e-124
WP_000391592.1|1160917_1161823_+	hypothetical protein	NA	A0A0F6N3N6	Staphylococcus_phage	100.0	1.4e-168
WP_000143212.1|1161759_1161960_-	excisionase	NA	Q38044	Staphylococcus_phage	100.0	5.6e-30
WP_001145728.1|1162072_1163122_+|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	100.0	1.6e-203
WP_001074405.1|1163189_1164587_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001010508.1|1164737_1165202_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_000807674.1|1165191_1166433_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.5	1.8e-110
WP_000205572.1|1166547_1167855_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1167952_1168714_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
1171109:1171124	attR	CTTTTGGTAATTCTTT	NA	NA	NA	NA
>prophage 94
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1172198	1173224	2758612		Bacillus_virus(100.0%)	1	NA	NA
WP_064135508.1|1172198_1173224_-	methionine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	1.8e-26
>prophage 95
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1176293	1181471	2758612		Streptococcus_phage(50.0%)	8	NA	NA
WP_000589550.1|1176293_1176650_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001147956.1|1176793_1177114_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	35.1	9.1e-06
WP_000422908.1|1177263_1177803_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150033.1|1177885_1178602_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	29.7	3.4e-16
WP_000974451.1|1178749_1179172_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1179570_1180065_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255550.1|1180220_1180838_+	amino acid transporter	NA	NA	NA	NA	NA
WP_016187137.1|1180910_1181471_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.9	3.8e-31
>prophage 96
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1184874	1186118	2758612		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1184874_1185075_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_001622483.1|1185431_1186118_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	2.9e-33
>prophage 97
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1195414	1220461	2758612	integrase,coat	Staphylococcus_phage(66.67%)	30	1199680:1199695	1214481:1214496
WP_001806213.1|1195414_1196143_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	36.8	2.1e-18
WP_000999093.1|1196427_1197042_-	stage II sporulation protein M	NA	NA	NA	NA	NA
WP_000746602.1|1197882_1198605_+	exotoxin	NA	A0A097PAT7	Streptococcus_pyogenes_phage	29.3	1.6e-18
WP_001043552.1|1198771_1199572_-	staphylococcal enterotoxin type C2	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.4	3.1e-50
1199680:1199695	attL	ATTTAATGATTTCACG	NA	NA	NA	NA
WP_001035612.1|1200355_1200910_+	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	67.2	4.2e-59
WP_001001286.1|1201130_1201799_-	hypothetical protein	NA	A0A0A7S0U2	Clostridium_phage	33.7	4.5e-15
WP_001805416.1|1201791_1201980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000360021.1|1202092_1203133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045181470.1|1203803_1204016_-	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	98.6	1.1e-31
WP_000777464.1|1204147_1204675_-|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	98.9	1.1e-88
WP_000856046.1|1204903_1205482_-	hypothetical protein	NA	A0A1W6JQG0	Staphylococcus_phage	95.8	7.8e-80
WP_001288441.1|1205516_1205861_-	hypothetical protein	NA	A0A1W6JQF3	Staphylococcus_phage	100.0	1.4e-57
WP_001019808.1|1206569_1207211_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	92.5	1.9e-111
WP_000998185.1|1207207_1207492_-	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	98.9	7.7e-49
WP_001039170.1|1207493_1207856_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	98.3	3.4e-65
WP_000390453.1|1208156_1209614_-	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	95.9	6.6e-277
WP_001002717.1|1209630_1210500_-	hypothetical protein	NA	A0A1W6JQL5	Staphylococcus_phage	95.8	8.7e-160
WP_001103939.1|1210563_1210881_-	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	57.0	3.2e-19
WP_001058494.1|1210883_1211093_-	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	8.5e-29
WP_000784885.1|1211085_1211232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000163544.1|1211243_1211462_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001045296.1|1211497_1211701_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_000358990.1|1211836_1212640_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JC02	uncultured_Caudovirales_phage	55.9	5.3e-10
WP_000149511.1|1212629_1213736_+|integrase	site-specific integrase	integrase	H0UST3	Bacillus_phage	44.4	1.1e-77
WP_001085185.1|1214298_1214763_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
1214481:1214496	attR	ATTTAATGATTTCACG	NA	NA	NA	NA
WP_001050026.1|1214784_1217157_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.7	7.3e-92
WP_001165966.1|1217190_1217931_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|1218059_1218293_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1218359_1218818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|1219156_1220461_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 98
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1231504	1237376	2758612		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1231504_1232092_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|1232654_1233599_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|1233709_1234705_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369722.1|1234701_1235613_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1236440_1237376_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 99
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1241536	1244365	2758612		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662699.1|1241536_1244365_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.7	0.0e+00
>prophage 100
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1247683	1248523	2758612		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_042744219.1|1247683_1248523_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	2.6e-12
>prophage 101
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1254604	1260318	2758612		Streptococcus_phage(66.67%)	5	NA	NA
WP_001622509.1|1254604_1255687_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	3.4e-44
WP_000686346.1|1256051_1256918_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192949.1|1257061_1257703_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.7	5.3e-37
WP_000258151.1|1257874_1258930_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460988.1|1259247_1260318_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 102
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1269602	1292710	2758612		uncultured_Caudovirales_phage(35.71%)	18	NA	NA
WP_000616861.1|1269602_1270364_-	ATP-binding cassette domain-containing protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.6	2.7e-16
WP_001245581.1|1270360_1271317_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876313.1|1271303_1272275_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	79.9	1.0e-140
WP_000562500.1|1272649_1273621_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	3.2e-171
WP_000855505.1|1273738_1275844_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1275806_1276205_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068497.1|1277006_1277873_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1277892_1278393_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193753.1|1278733_1280239_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.6e-58
WP_031785486.1|1280316_1280418_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429016.1|1280508_1281426_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	2.1e-07
WP_000197263.1|1282113_1282662_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663021.1|1282819_1283878_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.9	2.6e-20
WP_000606781.1|1284117_1285632_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589263.1|1285624_1286602_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	5.4e-25
WP_000983676.1|1286822_1288604_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525111.1|1288615_1290499_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_000098285.1|1290769_1292710_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.3e-110
>prophage 103
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1295854	1305699	2758612		Pandoravirus(12.5%)	12	NA	NA
WP_001217805.1|1295854_1297006_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
WP_000604517.1|1296989_1297583_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	8.9e-39
WP_000446726.1|1297933_1298602_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	7.4e-66
WP_000941336.1|1298603_1299023_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062976.1|1299026_1299740_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000637683.1|1299838_1300423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093554.1|1300702_1301143_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1301483_1301957_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1301931_1302618_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|1302617_1303673_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702775.1|1303744_1304728_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	43.0	7.3e-62
WP_000931231.1|1304859_1305699_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.3	1.9e-55
>prophage 104
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1317320	1318694	2758612		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000952028.1|1317320_1318694_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	33.8	2.3e-45
>prophage 105
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1323670	1329950	2758612		Bacillus_phage(33.33%)	6	NA	NA
WP_000857605.1|1323670_1325344_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	23.2	3.4e-11
WP_000737145.1|1325340_1326972_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	28.2	8.8e-12
WP_000469886.1|1327190_1328066_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358502.1|1328237_1328921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148819.1|1328923_1329382_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820900.1|1329383_1329950_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	4.7e-21
>prophage 106
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1336964	1337438	2758612		Pandoravirus(100.0%)	1	NA	NA
WP_000844823.1|1336964_1337438_-	cupin	NA	A0A291AU44	Pandoravirus	38.2	3.2e-15
>prophage 107
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1342700	1343498	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1342700_1343498_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 108
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1348218	1348980	2758612		Planktothrix_phage(100.0%)	1	NA	NA
WP_000153733.1|1348218_1348980_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	3.2e-33
>prophage 109
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1353359	1354403	2758612		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_001030756.1|1353359_1354403_-	alpha/beta hydrolase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	28.0	4.4e-17
>prophage 110
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1360926	1361724	2758612		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1360926_1361724_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 111
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1364953	1368912	2758612		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1364953_1366681_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793048.1|1367101_1368397_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	1.5e-14
WP_000832260.1|1368513_1368912_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 112
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1375847	1376591	2758612		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|1375847_1376591_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 113
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1387542	1388103	2758612	integrase	Streptococcus_phage(100.0%)	1	1381696:1381710	1391690:1391704
1381696:1381710	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044966.1|1387542_1388103_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7Y4J2	Streptococcus_phage	31.3	1.3e-18
WP_001044966.1|1387542_1388103_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7Y4J2	Streptococcus_phage	31.3	1.3e-18
1391690:1391704	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 114
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1401473	1404827	2758612		Tupanvirus(50.0%)	3	NA	NA
WP_001200749.1|1401473_1402484_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.6	1.5e-33
WP_001796423.1|1402982_1403504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000180234.1|1403531_1404827_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 115
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1413015	1414338	2758612		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_031928154.1|1413015_1414338_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.1	1.4e-108
>prophage 116
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1425640	1426297	2758612		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455258.1|1425640_1426297_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	6.4e-46
>prophage 117
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1429964	1433285	2758612		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100830.1|1429964_1431341_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	1.8e-21
WP_000347068.1|1431884_1433285_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	2.1e-54
>prophage 118
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1448326	1448989	2758612		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067257.1|1448326_1448989_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	36.9	3.1e-24
>prophage 119
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1455535	1456723	2758612		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250816.1|1455535_1456723_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.8	8.8e-46
>prophage 120
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1459753	1470707	2758612		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1459753_1461835_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1461957_1462428_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1462493_1462907_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1463004_1463259_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA	NA
WP_001827373.1|1463395_1466992_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	1.9e-67
WP_000918680.1|1467155_1470707_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 121
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1474390	1479173	2758612	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1474390_1474939_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1474951_1475134_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1475189_1475333_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872878.1|1475447_1476017_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664731.1|1476097_1476622_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|1476621_1477368_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370179.1|1477375_1477780_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631980.1|1477772_1479173_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	32.0	3.2e-55
>prophage 122
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1485184	1487641	2758612	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897128.1|1485184_1487641_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.3	4.7e-134
>prophage 123
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1506556	1516829	2758612	protease,tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1506556_1508044_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_031785444.1|1508096_1508189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613719.1|1508582_1509059_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154303.1|1509055_1509421_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167941.1|1509398_1510202_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	30.8	5.1e-21
WP_000057594.1|1510417_1511350_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148605.1|1511528_1512410_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167886.1|1512638_1514732_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1514989_1515529_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176731.1|1515533_1516829_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.2	1.4e-12
>prophage 124
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1526085	1528550	2758612		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1526085_1527051_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252527.1|1527197_1528550_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 125
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1534433	1537531	2758612	tRNA	Hokovirus(50.0%)	2	NA	NA
WP_001051142.1|1534433_1536407_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	32.6	3.2e-93
WP_000279924.1|1536691_1537531_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.4	1.3e-56
>prophage 126
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1541437	1542055	2758612		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272125.1|1541437_1542055_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	7.1e-47
>prophage 127
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1551447	1553145	2758612		Streptococcus_virus(100.0%)	1	NA	NA
WP_064135572.1|1551447_1553145_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.1	6.7e-55
>prophage 128
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1569794	1576019	2758612		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170274.1|1569794_1570799_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.1	1.4e-23
WP_000825537.1|1571132_1571975_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_042744277.1|1572011_1572671_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_042744276.1|1572674_1573700_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	8.2e-32
WP_001036647.1|1573978_1575121_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634103.1|1575113_1576019_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.4	3.2e-48
>prophage 129
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1598796	1601605	2758612		Staphylococcus_phage(100.0%)	2	NA	NA
WP_064135574.1|1598796_1600056_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	37.1	2.2e-47
WP_000028601.1|1600048_1601605_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	97.7	1.1e-282
>prophage 130
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1614174	1615908	2758612	transposase	Paenibacillus_phage(50.0%)	2	NA	NA
WP_000159788.1|1614174_1614501_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	2.5e-11
WP_000041875.1|1615203_1615908_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.6	1.5e-29
>prophage 131
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1621886	1624919	2758612		Hokovirus(50.0%)	2	NA	NA
WP_064135577.1|1621886_1623428_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.2	9.5e-24
WP_000264071.1|1623452_1624919_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 132
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1633875	1635399	2758612		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930500.1|1633875_1635399_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 133
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1643987	1650316	2758612		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|1643987_1644491_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1644511_1644808_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052483.1|1645051_1645243_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
WP_001218729.1|1645328_1646426_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157348.1|1646437_1646641_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_000373079.1|1646670_1647552_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001621659.1|1647705_1648551_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655697.1|1649212_1650316_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.1	1.1e-10
>prophage 134
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1660236	1661079	2758612		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209476.1|1660236_1661079_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.7	3.8e-11
>prophage 135
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1680857	1683592	2758612		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280808.1|1680857_1681880_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
WP_001191950.1|1681857_1682802_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000854324.1|1682791_1683592_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	41.9	6.8e-42
>prophage 136
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1701832	1702510	2758612		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911015.1|1701832_1702510_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.1	1.0e-30
>prophage 137
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1721790	1726230	2758612		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549267.1|1721790_1726230_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	24.3	8.2e-28
>prophage 138
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1738192	1739854	2758612		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570084.1|1738192_1738852_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	36.6	3.4e-23
WP_000736796.1|1738903_1739854_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	2.6e-16
>prophage 139
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1748380	1749817	2758612		Pandoravirus(100.0%)	1	NA	NA
WP_000164000.1|1748380_1749817_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.8	4.8e-30
>prophage 140
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1753574	1758114	2758612		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000925389.1|1753574_1755314_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	2.6e-62
WP_000608820.1|1755574_1756249_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975339.1|1756392_1758114_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	37.4	2.7e-11
>prophage 141
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1767441	1768485	2758612		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000645598.1|1767441_1768485_-	galactitol-1-phosphate 5-dehydrogenase	NA	A0A0K0KVL7	Prochlorococcus_phage	27.7	2.7e-14
>prophage 142
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1775701	1777231	2758612		Vibrio_phage(100.0%)	1	NA	NA
WP_000838200.1|1775701_1777231_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	49.4	8.2e-12
>prophage 143
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1789752	1791258	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008393.1|1789752_1791258_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.1	3.5e-39
>prophage 144
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1802405	1807764	2758612		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894660.1|1802405_1804655_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
WP_000837099.1|1805242_1806211_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127975.1|1806207_1807764_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 145
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1818167	1820229	2758612		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818909.1|1818167_1819265_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166909.1|1819650_1820229_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.4	1.3e-13
>prophage 146
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1828780	1830373	2758612		Bacillus_virus(100.0%)	1	NA	NA
WP_000067369.1|1828780_1830373_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.6	2.9e-15
>prophage 147
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1846966	1848151	2758612		Klosneuvirus(100.0%)	1	NA	NA
WP_001084425.1|1846966_1848151_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	30.1	3.1e-35
>prophage 148
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1853008	1860184	2758612		Tupanvirus(100.0%)	1	NA	NA
WP_001656945.1|1853008_1860184_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	29.9	1.3e-67
>prophage 149
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1865032	1868031	2758612		Bacillus_virus(50.0%)	4	NA	NA
WP_000590842.1|1865032_1865773_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	41.1	1.7e-39
WP_000171926.1|1866114_1866627_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356967.1|1866806_1867010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013475.1|1867071_1868031_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 150
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1871371	1873856	2758612		Catovirus(50.0%)	2	NA	NA
WP_000723456.1|1871371_1872517_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	26.1	4.1e-24
WP_000779511.1|1872593_1873856_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.5	1.2e-21
>prophage 151
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1880874	1887439	2758612		Catovirus(50.0%)	6	NA	NA
WP_000413171.1|1880874_1881999_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
WP_001028280.1|1882002_1883112_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459062.1|1883124_1884153_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_000940779.1|1884142_1885966_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.9	6.1e-30
WP_000565293.1|1885985_1886750_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037324.1|1886752_1887439_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	8.2e-28
>prophage 152
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1896269	1897043	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1896269_1897043_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 153
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1905078	1905678	2758612		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1905078_1905678_-	Superoxide dismutase [Mn/Fe] 2	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 154
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1910626	1911607	2758612		Catovirus(100.0%)	1	NA	NA
WP_001796610.1|1910626_1911607_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.4	2.7e-48
>prophage 155
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1915459	1916662	2758612		Tupanvirus(100.0%)	1	NA	NA
WP_001223695.1|1915459_1916662_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	6.7e-09
>prophage 156
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1924928	1929138	2758612		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570806.1|1924928_1925909_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.4	1.6e-40
WP_001045124.1|1926139_1927132_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924996.1|1927147_1928143_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136627.1|1928139_1929138_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.9	2.0e-14
>prophage 157
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1978860	1979989	2758612	transposase	Paenibacillus_phage(100.0%)	1	NA	NA
WP_098686295.1|1978860_1979989_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.3	5.2e-80
>prophage 158
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	1984878	1994874	2758612		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|1984878_1985679_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_001104170.1|1986066_1986855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001060151.1|1986855_1988190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|1988182_1990009_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|1990021_1990723_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095327.1|1991912_1993196_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	2.3e-68
WP_000375647.1|1993473_1994874_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 159
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2001559	2010598	2758612	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884335.1|2001559_2002846_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.2	2.7e-88
WP_000177475.1|2003223_2004738_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.0	2.6e-90
WP_000449218.1|2005063_2005876_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819075.1|2005963_2008627_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	7.9e-119
WP_000255583.1|2008663_2010598_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	4.4e-143
>prophage 160
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2020686	2023815	2758612		Faecalibacterium_phage(33.33%)	5	NA	NA
WP_000742837.1|2020686_2021526_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|2021842_2022196_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779134.1|2022263_2022659_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_160186324.1|2022918_2023488_+	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|2023614_2023815_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
>prophage 161
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2027128	2027887	2758612		Planktothrix_phage(100.0%)	1	NA	NA
WP_086095094.1|2027128_2027887_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.0	1.0e-34
>prophage 162
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2047005	2048019	2758612		Faustovirus(100.0%)	1	NA	NA
WP_000639196.1|2047005_2048019_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	21.9	1.4e-07
>prophage 163
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2060415	2061108	2758612		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185857.1|2060415_2061108_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	37.6	1.7e-28
>prophage 164
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2090730	2092590	2758612		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125632.1|2090730_2092590_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	1.3e-14
>prophage 165
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2119452	2120208	2758612		Planktothrix_phage(100.0%)	1	NA	NA
WP_000923765.1|2119452_2120208_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	1.8e-31
>prophage 166
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2123644	2124142	2758612		Canarypox_virus(100.0%)	1	NA	NA
WP_001065267.1|2123644_2124142_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	2.4e-21
>prophage 167
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2129180	2131564	2758612		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071717.1|2129180_2131031_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	1.2e-235
WP_000173331.1|2131027_2131564_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.0	3.9e-41
>prophage 168
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2136440	2146552	2758612	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000038850.1|2136440_2138150_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	2.9e-58
WP_000011688.1|2138427_2138640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001028779.1|2138919_2139363_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_064135544.1|2139556_2141152_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	1.5e-77
WP_001796575.1|2141214_2141544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130051.1|2141839_2143336_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031407.1|2143531_2144422_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001237623.1|2144544_2144961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030055.1|2145214_2146552_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	27.4	4.2e-20
>prophage 169
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2174724	2179606	2758612		Staphylococcus_phage(66.67%)	4	NA	NA
WP_000751266.1|2174724_2175426_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	3.1e-38
WP_000996740.1|2175701_2176190_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379831.1|2176695_2178507_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.7e-35
WP_000725216.1|2178868_2179606_+	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.7	6.1e-05
>prophage 170
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2186911	2191102	2758612		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_000161365.1|2186911_2187910_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	3.5e-35
WP_042744331.1|2187999_2188206_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024132.1|2188693_2191102_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.7	4.9e-128
>prophage 171
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2200344	2203337	2758612	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001063338.1|2200344_2202453_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.6	1.5e-117
WP_000262599.1|2202815_2203337_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.3	2.4e-27
>prophage 172
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2209762	2216145	2758612		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062662.1|2209762_2211502_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	6.0e-35
WP_000473692.1|2211801_2213868_+	PTS glucoside EIICBA component	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206034.1|2214247_2214658_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240665.1|2214699_2215044_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228154.1|2215176_2216145_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.9	1.2e-11
>prophage 173
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2225440	2226433	2758612		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161536.1|2225440_2226433_-	D-lactate dehydrogenase	NA	M1HYB0	Acanthocystis_turfacea_Chlorella_virus	31.5	1.1e-36
>prophage 174
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2235847	2236543	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000382895.1|2235847_2236543_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.0	8.8e-38
>prophage 175
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2255934	2263121	2758612		Bacillus_phage(66.67%)	6	NA	NA
WP_000721337.1|2255934_2256801_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.9	3.4e-79
WP_000217713.1|2256927_2257236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000678763.1|2257375_2257642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078103009.1|2257925_2259734_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.7	3.2e-95
WP_000755944.1|2259865_2260258_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000088708.1|2260259_2263121_+	DUF3427 domain-containing protein	NA	Q5YA94	Bacillus_phage	27.9	4.0e-28
>prophage 176
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2267558	2268254	2758612		Bacillus_phage(100.0%)	1	NA	NA
WP_000217460.1|2267558_2268254_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	36.5	6.6e-09
>prophage 177
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2273691	2274510	2758612		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824951.1|2273691_2274510_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	29.5	3.2e-10
>prophage 178
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2282449	2284007	2758612		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173856.1|2282449_2283265_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	4.7e-14
WP_000590515.1|2283257_2284007_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	8.1e-21
>prophage 179
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2290239	2294666	2758612		Bacillus_virus(50.0%)	4	NA	NA
WP_000923514.1|2290239_2290902_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.0	2.7e-20
WP_160186331.1|2290894_2291671_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000026186.1|2292064_2293252_+	MFS transporter	NA	NA	NA	NA	NA
WP_000700906.1|2293313_2294666_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	35.8	6.6e-13
>prophage 180
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2298301	2299528	2758612		Mycoplasma_phage(100.0%)	1	NA	NA
WP_000948985.1|2298301_2299528_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	39.6	8.6e-20
>prophage 181
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2317900	2324031	2758612		Bacillus_phage(66.67%)	6	NA	NA
WP_001176860.1|2317900_2319043_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	43.9	6.9e-56
WP_000779354.1|2319310_2319697_+	GtrA family protein	NA	NA	NA	NA	NA
WP_000482647.1|2319830_2319938_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_000301894.1|2319964_2320132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001064831.1|2320509_2322249_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	23.9	8.7e-34
WP_000488492.1|2322297_2324031_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.1e-32
>prophage 182
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2327492	2333271	2758612		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000971558.1|2327492_2328608_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	25.0	1.2e-20
WP_000286884.1|2328618_2329311_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200952.1|2329321_2329789_+	QueT transporter family protein	NA	NA	NA	NA	NA
WP_001056918.1|2329847_2330825_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	1.4e-142
WP_000916696.1|2330826_2331774_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	78.7	4.0e-142
WP_000594516.1|2332341_2333271_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.4	1.5e-120
>prophage 183
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2341094	2341826	2758612		Bacillus_virus(100.0%)	1	NA	NA
WP_000615468.1|2341094_2341826_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.3	3.4e-24
>prophage 184
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2357667	2359227	2758612		Escherichia_phage(100.0%)	1	NA	NA
WP_000692645.1|2357667_2359227_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 185
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2380627	2381662	2758612		Bacillus_virus(100.0%)	1	NA	NA
WP_000655972.1|2380627_2381662_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 186
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2392080	2398641	2758612		Staphylococcus_phage(25.0%)	8	NA	NA
WP_000340143.1|2392080_2392809_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.2	1.5e-27
WP_000372850.1|2392942_2393506_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000793171.1|2393682_2394138_-	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
WP_000977035.1|2394134_2394578_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000477342.1|2394744_2396118_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.3	6.7e-13
WP_000249501.1|2396110_2396785_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.6	1.2e-52
WP_000761401.1|2396920_2397976_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229907.1|2397975_2398641_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	7.2e-37
>prophage 187
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2402379	2403588	2758612		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|2402379_2403588_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 188
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2415685	2416585	2758612		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524843.1|2415685_2416585_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.2	4.7e-15
>prophage 189
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2429391	2430273	2758612		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000730049.1|2429391_2430273_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	2.9e-62
>prophage 190
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2438153	2438789	2758612		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_064135536.1|2438153_2438789_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	5.5e-10
>prophage 191
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2452538	2457269	2758612		Staphylococcus_phage(50.0%)	4	NA	NA
WP_072468848.1|2452538_2453177_+	autolysin	NA	A0A1W6JQU5	Staphylococcus_phage	48.1	2.6e-36
WP_000684154.1|2454237_2455362_+	NAD(P)-binding protein	NA	A0A2K9L3K5	Tupanvirus	22.8	1.6e-12
WP_160186333.1|2455453_2456407_-	hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	1.3e-31
WP_000733941.1|2456768_2457269_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 192
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2461189	2461999	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717388.1|2461189_2461999_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.4e-07
>prophage 193
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2480975	2481581	2758612		Pithovirus(100.0%)	1	NA	NA
WP_000913006.1|2480975_2481581_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.6	3.8e-13
>prophage 194
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2493668	2496836	2758612		Leptospira_phage(100.0%)	1	NA	NA
WP_000592293.1|2493668_2496836_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	6.2e-62
>prophage 195
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2520477	2522144	2758612		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389669.1|2520477_2521287_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.5	4.3e-20
WP_000027572.1|2521283_2522144_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	25.7	1.1e-10
>prophage 196
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2525185	2530031	2758612		Mycobacterium_phage(50.0%)	4	NA	NA
WP_000204279.1|2525185_2526622_+	MarR family transcriptional regulator	NA	A0A088F7M4	Mycobacterium_phage	31.2	3.5e-57
WP_000655242.1|2527713_2527896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001622005.1|2527877_2528078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000130128.1|2528366_2530031_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	26.1	3.6e-45
>prophage 197
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2539956	2541913	2758612		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001015496.1|2539956_2540805_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	38.4	1.3e-43
WP_001622009.1|2541023_2541245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001622010.1|2541172_2541913_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	30.3	2.3e-15
>prophage 198
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2548235	2549648	2758612		Pandoravirus(100.0%)	1	NA	NA
WP_000169213.1|2548235_2549648_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	3.0e-48
>prophage 199
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2555449	2557012	2758612		Vibrio_phage(100.0%)	1	NA	NA
WP_160186335.1|2555449_2557012_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.0	3.5e-18
>prophage 200
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2567217	2568186	2758612		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989088.1|2567217_2568186_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 201
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2584012	2584921	2758612		Klosneuvirus(100.0%)	1	NA	NA
WP_000162593.1|2584012_2584921_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.3	1.2e-26
>prophage 202
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2602149	2604970	2758612		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334465.1|2602149_2603955_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.6	2.0e-97
WP_160186337.1|2604187_2604970_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.5	1.7e-08
>prophage 203
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2614581	2618418	2758612		Clostridium_phage(50.0%)	4	NA	NA
WP_000070865.1|2614581_2615025_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_042744365.1|2615145_2615856_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_001083321.1|2616170_2616833_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242295.1|2617116_2618418_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	3.6e-133
>prophage 204
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2626356	2627967	2758612		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159966.1|2626356_2627967_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.1e-146
>prophage 205
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2635771	2643524	2758612		Bacillus_virus(25.0%)	9	NA	NA
WP_000273353.1|2635771_2636371_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	4.8e-32
WP_000460243.1|2636371_2637448_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248725.1|2637434_2638271_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_072492072.1|2638303_2639401_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.6	6.1e-41
WP_000697337.1|2639397_2639817_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654179.1|2639923_2640448_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|2640474_2641713_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|2641740_2642370_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723406.1|2642393_2643524_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	31.1	1.4e-27
>prophage 206
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2653957	2654353	2758612		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|2653957_2654353_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 207
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2660262	2660910	2758612		Moumouvirus(100.0%)	1	NA	NA
WP_001187625.1|2660262_2660910_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.5	9.5e-10
>prophage 208
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2668110	2669631	2758612		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178935.1|2668110_2669631_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 209
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2675305	2677333	2758612		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546588.1|2675305_2677333_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.1	1.5e-24
>prophage 210
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2682482	2685866	2758612		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2682482_2682845_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_042744356.1|2683193_2684195_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2684313_2684640_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190825.1|2684641_2685121_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041107.1|2685095_2685866_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	1.3e-21
>prophage 211
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2700848	2705572	2758612		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094576.1|2700848_2702378_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_072399972.1|2702407_2703427_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2703548_2703803_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047819.1|2703802_2705572_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.1	7.0e-63
>prophage 212
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2709337	2723402	2758612	tRNA	Moraxella_phage(16.67%)	13	NA	NA
WP_000159047.1|2709337_2710363_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.9	3.1e-63
WP_000106320.1|2710676_2712287_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.6	3.3e-19
WP_072468947.1|2712378_2712492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602061.1|2712651_2714580_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	30.2	7.1e-53
WP_001283613.1|2714832_2715468_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_073394851.1|2715822_2716851_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581077.1|2716910_2717135_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_160186338.1|2717343_2718594_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	5.3e-41
WP_000790314.1|2718777_2719728_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_000141419.1|2719876_2721361_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.8	4.0e-19
WP_001253295.1|2721357_2722317_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_031785433.1|2722506_2722614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000688492.1|2722685_2723402_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 213
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2730531	2732508	2758612		uncultured_virus(100.0%)	2	NA	NA
WP_000917289.1|2730531_2730816_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|2730891_2732508_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
>prophage 214
NZ_CP047811	Staphylococcus aureus strain UP_1522 chromosome, complete genome	2758612	2736453	2758141	2758612	integrase,transposase	Staphylococcus_phage(94.74%)	39	2730779:2730794	2743333:2743348
2730779:2730794	attL	TTTTAAATGAAGAAGA	NA	NA	NA	NA
WP_000791399.1|2736453_2737509_+	succinyl-diaminopimelate desuccinylase	NA	A0A2I6PER8	Staphylococcus_phage	34.6	6.0e-38
WP_000595616.1|2737530_2738550_+	beta-channel forming cytolysin	NA	A0A2I6PEU3	Staphylococcus_phage	39.8	2.6e-54
WP_086045362.1|2739687_2740725_-|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	99.7	2.6e-179
WP_000825947.1|2740783_2741248_-	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_000705248.1|2741347_2741530_-	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_098686295.1|2741732_2742862_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.3	5.2e-80
WP_000591749.1|2742960_2743302_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000759682.1|2743307_2744240_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
2743333:2743348	attR	TCTTCTTCATTTAAAA	NA	NA	NA	NA
WP_001031454.1|2744255_2744969_-	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_001801500.1|2744931_2745105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000854074.1|2745101_2745383_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	96.5	4.6e-38
WP_001025404.1|2745379_2745595_+	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000128907.1|2745583_2745913_-	hypothetical protein	NA	M9NS98	Staphylococcus_phage	100.0	2.7e-53
WP_001148605.1|2745963_2746716_+	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_001148862.1|2746731_2746929_+	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_000762519.1|2746915_2747296_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	99.2	3.4e-68
WP_001120201.1|2747350_2747674_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2747670_2747832_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2747926_2748229_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2748233_2748494_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001562930.1|2748502_2748682_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	8.9e-27
WP_064135593.1|2748774_2750718_+	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	99.8	0.0e+00
WP_000138475.1|2750719_2751640_+	recombinase	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_073394849.1|2751720_2752338_+	MBL fold metallo-hydrolase	NA	A0A2I6PDI9	Staphylococcus_phage	100.0	9.1e-87
WP_000610648.1|2752338_2752809_+	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	98.7	1.3e-80
WP_000148321.1|2752838_2753732_+	DnaD domain-containing protein	NA	A0A2I6PDG7	Staphylococcus_phage	99.3	5.5e-141
WP_000338530.1|2753738_2753957_+	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000401960.1|2753965_2754370_+	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	100.0	1.9e-72
WP_000101288.1|2754382_2754751_+	hypothetical protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
WP_000131370.1|2754754_2754997_+	hypothetical protein	NA	Q4ZDP7	Staphylococcus_virus	95.0	2.1e-39
WP_001065097.1|2755011_2755266_+	DUF1024 family protein	NA	A0A0H3U469	Staphylococcus_phage	100.0	5.0e-39
WP_001066447.1|2755415_2755952_+	hypothetical protein	NA	A0A0H3U2Z8	Staphylococcus_phage	100.0	7.2e-96
WP_001282074.1|2755988_2756234_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_160186339.1|2756230_2756437_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	98.5	6.4e-29
WP_000592207.1|2756433_2756820_+	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000595265.1|2756816_2756966_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001622114.1|2756965_2757166_+	DUF1514 domain-containing protein	NA	A0A2I6PDV9	Staphylococcus_phage	98.5	4.0e-28
WP_000590122.1|2757193_2757610_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988336.1|2757841_2758141_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
