The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047662	Escherichia coli strain LD93-1 chromosome, complete genome	4773797	1526980	1624149	4773797	protease,plate,terminase,holin,tRNA,capsid,tail,lysis,head,integrase,portal	Escherichia_phage(46.3%)	86	1535689:1535706	1580315:1580332
WP_000520781.1|1526980_1527301_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.6e-13
WP_000934040.1|1527331_1529608_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	2.5e-166
WP_001040187.1|1530408_1530627_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_001241678.1|1530911_1531616_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_004015322.1|1531657_1533379_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	25.2	9.9e-22
WP_001043575.1|1533379_1535146_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	24.3	7.0e-23
WP_000537418.1|1535268_1536234_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.6	8.5e-63
1535689:1535706	attL	GCGGAAACCGTCACGGCG	NA	NA	NA	NA
WP_000228473.1|1536778_1537273_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_160188186.1|1537407_1541397_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.7	1.2e-86
WP_001295343.1|1541551_1542163_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_000067755.1|1542173_1543517_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.8	2.1e-80
WP_000886683.1|1543607_1544900_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.2	1.5e-94
WP_000850303.1|1545138_1547583_+	dimethylsulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.8	6.6e-221
WP_000213098.1|1547593_1548211_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	60.6	5.0e-77
WP_000534637.1|1548212_1549076_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000165879.1|1549110_1549737_-	hydrolase	NA	NA	NA	NA	NA
WP_000109295.1|1550050_1551199_+	MFS transporter	NA	NA	NA	NA	NA
WP_000067979.1|1552216_1553014_-	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	26.6	1.3e-21
WP_000023390.1|1553045_1554041_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0F7LBR0	Escherichia_phage	100.0	5.4e-190
WP_001389238.1|1554134_1554434_-	helix-turn-helix transcriptional regulator	NA	Q1JS29	Enterobacteria_phage	100.0	3.0e-51
WP_001389237.1|1554542_1554899_+	hypothetical protein	NA	Q1JS28	Enterobacteria_phage	99.2	1.5e-62
WP_000217682.1|1555076_1555577_+	hypothetical protein	NA	A0A0F7LBQ6	Escherichia_phage	99.4	1.7e-91
WP_000557703.1|1555640_1555865_+	DUF2732 family protein	NA	S4TP68	Salmonella_phage	100.0	4.7e-33
WP_001277966.1|1555864_1556167_+	hypothetical protein	NA	U5N0U2	Enterobacteria_phage	99.0	1.7e-46
WP_001113264.1|1556166_1556391_+	TraR/DksA family transcriptional regulator	NA	S4TRY6	Salmonella_phage	100.0	2.9e-35
WP_000027667.1|1556387_1556663_+	hypothetical protein	NA	Q858T5	Yersinia_virus	100.0	3.8e-45
WP_160188187.1|1556652_1558920_+	replication endonuclease	NA	A0A0F7LBQ2	Escherichia_phage	97.1	0.0e+00
WP_021520307.1|1559167_1561387_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_112933659.1|1561896_1562931_-|portal	phage portal protein	portal	M1SV64	Escherichia_phage	99.7	2.1e-200
WP_000156861.1|1562930_1564703_-|terminase	terminase ATPase subunit family protein	terminase	A0A0F7LCK3	Escherichia_phage	99.8	0.0e+00
WP_001085975.1|1564876_1565731_+|capsid	GPO family capsid scaffolding protein	capsid	Q94MI4	Enterobacteria_phage	98.6	3.5e-137
WP_160188188.1|1565789_1566863_+|capsid	phage major capsid protein, P2 family	capsid	Q83VT1	Escherichia_phage	99.2	1.3e-200
WP_001593490.1|1566866_1567610_+|terminase	terminase endonuclease subunit	terminase	A0A0F7LBP7	Escherichia_phage	99.2	3.5e-125
WP_000988633.1|1567709_1568219_+|head	head completion/stabilization protein	head	U5N0S3	Enterobacteria_phage	100.0	1.1e-90
WP_000846409.1|1568218_1568422_+|tail	tail protein X	tail	A0A0F7LCN2	Escherichia_phage	100.0	3.0e-31
WP_000123123.1|1568425_1568707_+|holin	holin	holin	A0A0F7LA12	Escherichia_phage	100.0	1.3e-43
WP_001144111.1|1568706_1569204_+	glycoside hydrolase family 104 protein	NA	A0A0F7LBS0	Escherichia_phage	98.8	4.5e-92
WP_000736604.1|1569218_1569644_+	hypothetical protein	NA	M1SV74	Escherichia_phage	94.3	5.7e-56
WP_001719221.1|1569631_1570057_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A0F7LDJ6	Escherichia_phage	95.0	4.0e-65
WP_000917188.1|1570164_1570632_+|tail	phage tail protein	tail	Q7Y4E0	Escherichia_virus	99.4	1.1e-81
WP_001001787.1|1570624_1571077_+	phage virion morphogenesis protein	NA	A0A0F7LDR6	Escherichia_phage	99.3	2.4e-76
WP_160188189.1|1571148_1571934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160188190.1|1572017_1572653_+|plate	phage baseplate assembly protein V	plate	U5N3F0	Enterobacteria_phage	98.6	2.6e-113
WP_000127164.1|1572649_1572997_+|plate	baseplate assembly protein	plate	A0A0F7LDQ1	Escherichia_phage	100.0	1.3e-58
WP_160188191.1|1573001_1573910_+|plate	baseplate assembly protein	plate	A0A0F7LCQ9	Escherichia_phage	99.3	1.7e-161
WP_032219086.1|1573902_1574433_+|tail	phage tail protein I	tail	U5N0U8	Enterobacteria_phage	99.4	6.6e-102
WP_160188192.1|1574443_1576489_+|tail	phage tail protein	tail	A0A0F7LDR4	Escherichia_phage	99.0	0.0e+00
WP_040083689.1|1576492_1577020_+|tail	tail fiber assembly protein	tail	Q858V3	Yersinia_virus	96.6	1.8e-91
WP_032259603.1|1577188_1578142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032259605.1|1578436_1579273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160188193.1|1579516_1580707_+|tail	phage tail sheath protein	tail	A0A0F7LBW9	Escherichia_phage	99.7	4.8e-225
1580315:1580332	attR	CGCCGTGACGGTTTCCGC	NA	NA	NA	NA
WP_001251408.1|1580719_1581238_+|tail	phage major tail tube protein	tail	A0A0F7LDZ1	Escherichia_phage	100.0	1.4e-93
WP_001031303.1|1581294_1581570_+|tail	phage tail assembly protein	tail	A0A0F7LDQ8	Escherichia_phage	100.0	5.7e-41
WP_000785970.1|1581602_1581722_+|tail	GpE family phage tail protein	tail	A0A0F7LCR6	Escherichia_phage	100.0	1.0e-15
WP_160188194.1|1581714_1584162_+|tail	phage tail tape measure protein	tail	M1T2S3	Escherichia_phage	98.9	0.0e+00
WP_160188195.1|1584176_1584656_+|tail	phage tail protein	tail	Q7Y4C7	Escherichia_virus	98.7	9.6e-84
WP_160188196.1|1584655_1585819_+	phage late control D family protein	NA	A0A0F7LDZ2	Escherichia_phage	98.4	5.9e-204
WP_000468308.1|1585900_1586119_+	prophage transcriptional regulator OgrK	NA	A0A0F7LDQ9	Escherichia_phage	100.0	4.7e-38
WP_001292822.1|1586437_1588720_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.5	1.0e-162
WP_000642546.1|1588774_1589632_-	formate transporter FocA	NA	NA	NA	NA	NA
WP_001295344.1|1590037_1591798_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA	NA
WP_000642849.1|1591927_1592620_+	DUF421 domain-containing protein	NA	NA	NA	NA	NA
WP_000057138.1|1592818_1593907_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	46.8	3.5e-81
WP_000445231.1|1593977_1595261_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_001295345.1|1595428_1596193_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_000125016.1|1596365_1597049_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000140327.1|1597159_1598833_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000167336.1|1598992_1599277_+	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	3.2e-10
WP_000705764.1|1599484_1601749_+	ComEC family protein	NA	NA	NA	NA	NA
WP_000551270.1|1601785_1603534_+	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	29.8	2.5e-57
WP_000570540.1|1603530_1604517_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_000056538.1|1604553_1605786_+	winged helix DNA-binding protein YcaQ	NA	NA	NA	NA	NA
WP_000350058.1|1605837_1606020_+	protein YcaR	NA	NA	NA	NA	NA
WP_000011603.1|1606016_1606763_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000436907.1|1606916_1607810_+	YcbJ family phosphotransferase	NA	NA	NA	NA	NA
WP_000899600.1|1607786_1608566_-	envelope biogenesis factor ElyC	NA	NA	NA	NA	NA
WP_001298300.1|1608701_1609487_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_160188197.1|1609483_1610806_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_001295931.1|1610786_1611491_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_000572670.1|1611490_1615951_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_000925997.1|1616211_1618059_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_001295932.1|1618239_1618788_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	7.0e-06
WP_001109486.1|1618814_1619462_+	hydroxyacylglutathione hydrolase GloC	NA	NA	NA	NA	NA
WP_000462687.1|1619683_1620874_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_000977907.1|1621058_1622147_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	54.5	2.8e-99
WP_000117881.1|1622748_1624149_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	36.1	5.3e-82
>prophage 2
NZ_CP047662	Escherichia coli strain LD93-1 chromosome, complete genome	4773797	1830234	1841229	4773797	integrase,tail,transposase	Enterobacteria_phage(45.45%)	12	1829395:1829408	1837085:1837098
1829395:1829408	attL	AAACATTTTGCATC	NA	NA	NA	NA
WP_000444487.1|1830234_1831485_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	3.8e-23
WP_000741335.1|1831598_1832741_-|integrase	tyrosine-type recombinase/integrase	integrase	Q77Z02	Phage_21	100.0	3.6e-206
WP_000088653.1|1832730_1832967_-	excisionase	NA	NA	NA	NA	NA
WP_000488406.1|1833106_1833346_-	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	94.9	3.9e-38
WP_000763387.1|1833393_1833612_-	TraR/DksA family transcriptional regulator	NA	M1FQT7	Enterobacteria_phage	98.6	1.7e-35
WP_021557045.1|1833765_1834830_-	DGQHR domain-containing protein	NA	T1SBJ4	Salmonella_phage	65.1	2.0e-134
WP_000149533.1|1834826_1834985_-	DUF1317 family protein	NA	M1FJ61	Enterobacteria_phage	88.5	6.4e-21
WP_072163786.1|1834981_1835077_-	exonuclease	NA	A0A0N6WET1	Escherichia_phage	100.0	1.8e-10
WP_085949154.1|1835113_1836261_-|transposase	IS3-like element ISEc52 family transposase	transposase	Q716C2	Shigella_phage	96.3	2.4e-173
WP_111738630.1|1836453_1837086_+|tail	tail assembly protein	tail	A0A2R9YJH6	Escherichia_phage	98.6	8.5e-96
WP_111738629.1|1837146_1840560_+	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	97.1	0.0e+00
1837085:1837098	attR	GATGCAAAATGTTT	NA	NA	NA	NA
WP_001233090.1|1840629_1841229_+	Ail/Lom family protein	NA	A5LH44	Enterobacteria_phage	97.5	8.2e-109
>prophage 3
NZ_CP047662	Escherichia coli strain LD93-1 chromosome, complete genome	4773797	2115099	2207069	4773797	integrase,transposase	Escherichia_phage(23.81%)	78	2158285:2158302	2184669:2184686
WP_000604908.1|2115099_2115606_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	57.7	2.8e-41
WP_000826408.1|2115613_2116822_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	92.8	1.3e-206
WP_071593928.1|2116861_2118076_-	BenE family transporter YdcO	NA	NA	NA	NA	NA
WP_160188212.1|2118128_2118665_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001515270.1|2118737_2120699_+	23S rRNA 5-hydroxycytidine C2501 synthase	NA	Q6DW11	Phage_TP	28.6	1.6e-23
WP_000494244.1|2120790_2121021_-	YncJ family protein	NA	NA	NA	NA	NA
WP_004015752.1|2121442_2121859_+	type II toxin-antitoxin system antitoxin HicB	NA	F1C593	Cronobacter_phage	57.0	1.8e-30
WP_001543733.1|2121937_2123344_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_000047418.1|2123588_2124734_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000220396.1|2124751_2125765_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	37.9	2.1e-27
WP_089570247.1|2125765_2126707_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000555458.1|2126696_2127491_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004015759.1|2127512_2128937_+	aminobutyraldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001303494.1|2129033_2129129_-	stress response membrane protein YncL	NA	NA	NA	NA	NA
WP_000061178.1|2129323_2129497_+	GhoT/OrtT family toxin	NA	NA	NA	NA	NA
WP_000018633.1|2129582_2129816_+	YdcY family protein	NA	NA	NA	NA	NA
WP_001076535.1|2129816_2130266_-	DMT family transporter	NA	NA	NA	NA	NA
WP_001353827.1|2130262_2130781_-	L-methionine sulfoximine/L-methionine sulfone acetyltransferase	NA	NA	NA	NA	NA
WP_094318813.1|2130961_2131999_+	NADPH-dependent curcumin/dihydrocurcumin reductase	NA	NA	NA	NA	NA
WP_001300742.1|2132196_2132862_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_089570246.1|2132897_2134997_-	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	65.0	1.1e-131
WP_000550675.1|2135238_2136300_+	YncE family protein	NA	NA	NA	NA	NA
WP_001295649.1|2136414_2137914_-	L-asparagine permease	NA	NA	NA	NA	NA
WP_000598851.1|2138180_2138798_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_000226995.1|2138873_2139086_+	YncH family protein	NA	NA	NA	NA	NA
WP_097492685.1|2139905_2142014_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	26.0	2.5e-27
WP_160188213.1|2142080_2144117_+	RHS repeat protein	NA	NA	NA	NA	NA
WP_001001073.1|2146486_2146696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111738623.1|2147156_2148293_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_001120143.1|2148392_2148626_+	tautomerase PptA	NA	NA	NA	NA	NA
WP_001300670.1|2148622_2149192_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_000888203.1|2153128_2153608_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000347934.1|2153677_2156830_-	multidrug efflux RND transporter permease subunit OqxB	NA	NA	NA	NA	NA
WP_002914189.1|2156853_2158029_-	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NA	NA	NA	NA	NA
2158285:2158302	attL	TGGCACTGTTGCAAATAG	NA	NA	NA	NA
WP_001067858.1|2158348_2159053_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
WP_057109146.1|2159387_2159780_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_063102497.1|2160099_2160486_-	bleomycin binding protein	NA	NA	NA	NA	NA
WP_072644484.1|2162773_2162938_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_000259031.1|2163118_2163958_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA	NA
WP_000376616.1|2164085_2164289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001336345.1|2165865_2166156_-	DUF1010 domain-containing protein	NA	NA	NA	NA	NA
WP_001083725.1|2166267_2166765_-	trimethoprim-resistant dihydrofolate reductase DfrA12	NA	A0A0A0PL85	Bacillus_phage	40.9	7.5e-23
WP_001067855.1|2167169_2167874_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000018329.1|2168063_2168879_-	aminoglycoside O-phosphotransferase APH(3')-Ia	NA	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	100.0	6.1e-163
WP_000612791.1|2169965_2170829_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_001354008.1|2170866_2171112_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000034420.1|2171580_2172372_+	sulfonamide-resistant dihydropteroate synthase Sul3	NA	NA	NA	NA	NA
WP_000800531.1|2173551_2173884_-	quaternary ammonium compound efflux SMR transporter QacL	NA	E5E3Y9	Acinetobacter_phage	35.3	2.0e-08
WP_001206316.1|2174053_2174845_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_000095725.1|2174937_2176197_-	chloramphenicol efflux MFS transporter CmlA1	NA	S4TR35	Salmonella_phage	31.7	4.8e-26
WP_001261740.1|2176458_2177250_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_000050382.1|2177307_2177916_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_001456218.1|2178011_2178854_-	alpha/beta fold putative hydrolase EstX	NA	W8EKH7	Mycobacterium_phage	26.1	3.0e-08
WP_000845048.1|2179020_2180034_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_000454193.1|2180236_2180587_+	DUF3330 domain-containing protein	NA	NA	NA	NA	NA
WP_000147567.1|2180712_2181273_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	86.2	4.0e-49
WP_015344976.1|2181275_2184227_+|transposase	Tn3-like element TnAs3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	73.5	0.0e+00
WP_046788546.1|2184235_2184637_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067784.1|2184721_2185426_-|transposase	IS6-like element IS1006 family transposase	transposase	A0A077SL39	Escherichia_phage	85.8	1.9e-120
2184669:2184686	attR	TGGCACTGTTGCAAATAG	NA	NA	NA	NA
WP_001447541.1|2186349_2187234_+	DUF3363 domain-containing protein	NA	NA	NA	NA	NA
WP_000214122.1|2187450_2188665_+	chloramphenicol/florfenicol efflux MFS transporter FloR	NA	S4TR35	Salmonella_phage	28.7	1.2e-18
WP_001255015.1|2188692_2188998_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015344975.1|2189109_2190603_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_001445143.1|2190633_2190885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000251875.1|2190778_2191081_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_160188214.1|2191167_2191983_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA	NA
WP_085940648.1|2192072_2193162_+|transposase	IS4 family transposase ISAba1	transposase	NA	NA	NA	NA
WP_006581703.1|2193359_2193845_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000602738.1|2195655_2196408_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	44.7	2.4e-41
WP_000742814.1|2196829_2197855_-	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA	NA
WP_001199192.1|2198083_2198860_-	aminoglycoside N-acetyltransferase AAC(3)-IV	NA	NA	NA	NA	NA
WP_063840321.1|2199820_2200375_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
WP_001334766.1|2200505_2201336_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA	NA
WP_000186237.1|2201473_2202106_+	type B-3 chloramphenicol O-acetyltransferase CatB3	NA	A0A2R8FE91	Brazilian_cedratvirus	41.2	4.1e-26
WP_001749986.1|2202190_2202643_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA	NA
WP_000679427.1|2202865_2203213_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_160188215.1|2204175_2204379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000844627.1|2206826_2207069_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP047662	Escherichia coli strain LD93-1 chromosome, complete genome	4773797	2282869	2382432	4773797	protease,transposase,terminase,tail,lysis,integrase,portal	Enterobacteria_phage(46.34%)	98	2277003:2277020	2333232:2333249
2277003:2277020	attL	GAAGCAGAAAAACTGTTC	NA	NA	NA	NA
WP_000086931.1|2282869_2284420_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_001059075.1|2284403_2285279_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_025368664.1|2286096_2287494_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
WP_001610304.1|2287725_2287995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025368663.1|2287994_2288462_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001610302.1|2288504_2288876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001125439.1|2289074_2290397_-	type II toxin-antitoxin system serine/threonine protein kinase toxin HipA	NA	NA	NA	NA	NA
WP_001301023.1|2290396_2290663_-	type II toxin-antitoxin system antitoxin HipB	NA	NA	NA	NA	NA
WP_001083595.1|2290885_2292286_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	49.2	4.0e-106
WP_063081866.1|2292282_2296305_-	autotransporter barrel domain-containing lipoprotein	NA	NA	NA	NA	NA
WP_000113108.1|2296835_2298428_-	autoinducer-2 kinase	NA	NA	NA	NA	NA
WP_160188218.1|2298506_2299460_-	transcriptional regulator LsrR	NA	NA	NA	NA	NA
WP_001194860.1|2299708_2301244_+	autoinducer 2 ABC transporter ATP-binding protein LsrA	NA	A0A2H4PQG7	Staphylococcus_phage	23.6	7.2e-16
WP_094318973.1|2301237_2302266_+	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA	NA
WP_001222721.1|2302265_2303258_+	autoinducer 2 ABC transporter permease LsrD	NA	NA	NA	NA	NA
WP_000172465.1|2303269_2304292_+	autoinducer 2 ABC transporter substrate-binding protein LsrB	NA	NA	NA	NA	NA
WP_000774165.1|2304318_2305194_+	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA	NA
WP_000558527.1|2305217_2305508_+	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA	NA	NA	NA	NA
WP_094318974.1|2305564_2306323_+	trans-aconitate 2-methyltransferase	NA	NA	NA	NA	NA
WP_094318975.1|2306326_2307241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000854633.1|2307447_2308899_-	tagaturonate reductase	NA	NA	NA	NA	NA
WP_140427330.1|2309125_2310544_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	29.6	1.9e-18
WP_001191027.1|2310682_2311042_-	DUF4186 domain-containing protein	NA	NA	NA	NA	NA
WP_000257409.1|2311041_2311968_-	glutaminase B	NA	NA	NA	NA	NA
WP_094318976.1|2312031_2313420_-	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000366503.1|2313520_2314402_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000258578.1|2314479_2315595_+	putative protein YneK	NA	NA	NA	NA	NA
WP_094318978.1|2315744_2316935_+	L-arabinose MFS transporter	NA	NA	NA	NA	NA
WP_032259590.1|2316959_2317625_-	NAAT family transporter MarC	NA	NA	NA	NA	NA
WP_000843414.1|2317836_2318271_+	multiple antibiotic resistance transcriptional regulator MarR	NA	NA	NA	NA	NA
WP_000091199.1|2318290_2318674_+	MDR efflux pump AcrAB transcriptional activator MarA	NA	D0R0F8	Streptococcus_phage	32.3	4.7e-09
WP_000803659.1|2318705_2318924_+	multiple antibiotic resistance protein MarB	NA	NA	NA	NA	NA
WP_000087214.1|2318954_2319854_-	O-acetylserine/cysteine exporter	NA	NA	NA	NA	NA
WP_001054189.1|2320048_2321236_+	efflux MFS transporter YdeE	NA	NA	NA	NA	NA
WP_000901367.1|2321362_2321458_+	protein MgtS	NA	NA	NA	NA	NA
WP_000592826.1|2321676_2322567_-	diguanylate cyclase DgcZ	NA	A0A127AWB9	Bacillus_phage	37.7	1.1e-19
WP_094318979.1|2322821_2323214_-	YdeI family stress tolerance OB fold protein	NA	NA	NA	NA	NA
WP_001024746.1|2323489_2324008_+	2-oxo-tetronate isomerase	NA	NA	NA	NA	NA
WP_001515364.1|2324051_2326097_-	peptidyl-dipeptidase Dcp	NA	NA	NA	NA	NA
WP_000636568.1|2326233_2326980_+	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA	NA
WP_000215549.1|2327068_2327755_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000214712.1|2327931_2328135_+	putative selenium delivery protein YdfZ	NA	J9Q802	Salmonella_phage	55.2	1.6e-11
WP_000527780.1|2328170_2329631_-	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	29.6	1.5e-42
WP_000347482.1|2329719_2331003_-	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_120795384.1|2331607_2331721_+	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000836768.1|2331789_2332023_+	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_094318981.1|2332339_2332930_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.2e-24
WP_094318982.1|2333027_2333603_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	95.3	1.1e-102
2333232:2333249	attR	GAACAGTTTTTCTGCTTC	NA	NA	NA	NA
WP_160188219.1|2333602_2337001_-	short-chain fatty acid transporter	NA	X2KTY7	Enterobacteria_phage	35.5	1.8e-11
WP_001233090.1|2337065_2337665_-	Ail/Lom family protein	NA	A5LH44	Enterobacteria_phage	97.5	8.2e-109
WP_111738617.1|2337735_2341233_-	host specificity protein J	NA	A0A291AWT4	Escherichia_phage	97.4	0.0e+00
WP_160188220.1|2341293_2341941_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	94.9	4.7e-110
WP_047606715.1|2341838_2342582_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	98.4	3.1e-150
WP_094318780.1|2342587_2343286_-|tail	phage minor tail protein L	tail	A5LH40	Enterobacteria_phage	99.1	4.3e-133
WP_094318779.1|2343295_2343625_-|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	99.1	1.1e-59
WP_094318778.1|2343624_2346690_-|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	99.2	0.0e+00
WP_001161009.1|2346661_2346991_-|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	100.0	7.6e-56
WP_001300035.1|2346999_2347386_-|tail	phage minor tail protein G	tail	A0A291AWW5	Escherichia_phage	100.0	1.6e-65
WP_094318777.1|2347446_2348190_-|tail	phage tail protein	tail	A0A291AWU6	Escherichia_phage	99.6	6.6e-132
WP_001079398.1|2348201_2348603_-|tail	tail protein	tail	A0A291AWY2	Escherichia_phage	100.0	8.3e-73
WP_094318776.1|2348599_2349178_-|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	97.9	1.8e-100
WP_001283153.1|2349189_2349465_-	DNA breaking-rejoining protein	NA	K7PH43	Enterobacteria_phage	100.0	2.3e-45
WP_094318775.1|2349457_2349781_-	DUF2190 family protein	NA	K7PLV6	Enterobacteria_phage	98.1	2.5e-51
WP_094318774.1|2349867_2351895_-|protease	Clp protease ClpP	protease	K7PGT6	Enterobacteria_phage	99.2	0.0e+00
WP_094318773.1|2351839_2353348_-|portal	phage portal protein	portal	K7PJP3	Enterobacteria_phage	99.4	2.3e-288
WP_001072975.1|2353347_2353560_-	hypothetical protein	NA	A5LH28	Enterobacteria_phage	100.0	1.1e-31
WP_094318772.1|2353556_2355659_-|terminase	phage terminase large subunit family protein	terminase	A0A291AWY5	Escherichia_phage	96.4	0.0e+00
WP_094318771.1|2355658_2356153_-	DUF1441 family protein	NA	A0A291AWV8	Escherichia_phage	99.4	2.2e-83
WP_000548593.1|2356705_2356912_-	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	79.4	3.4e-22
WP_001019207.1|2357207_2357381_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_001443523.1|2357553_2357709_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071528545.1|2357856_2358045_-	cold-shock protein	NA	NA	NA	NA	NA
WP_000066495.1|2358055_2358268_-	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_001071774.1|2358631_2359129_-	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
WP_029364068.1|2359125_2359659_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	94.9	2.6e-98
WP_160188221.1|2359786_2360083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000165360.1|2360107_2360326_-	DUF1327 domain-containing protein	NA	K7PGU6	Enterobacteria_phage	63.8	1.6e-17
WP_000839587.1|2360330_2360546_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	94.4	2.9e-32
WP_140427319.1|2360736_2361450_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_060707078.1|2361856_2362816_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA	NA
WP_000598292.1|2364997_2365324_-	YnfA family protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
WP_000705211.1|2365458_2365800_+	DUF1283 family protein	NA	NA	NA	NA	NA
WP_001138581.1|2365834_2366395_+	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
WP_001321287.1|2366397_2367108_-	YnfC family lipoprotein	NA	NA	NA	NA	NA
WP_001300836.1|2367215_2367521_+	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
WP_000041681.1|2367719_2370146_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.2	4.5e-214
WP_001340362.1|2370206_2372630_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	48.6	1.7e-208
WP_000213028.1|2372640_2373258_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
WP_000526503.1|2373259_2374114_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000148710.1|2374156_2374771_+	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	36.3	8.7e-29
WP_001315626.1|2374929_2376222_+	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA	NA
WP_000919231.1|2376174_2376870_-	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA	NA
WP_000225262.1|2376994_2378215_-	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA	NA
WP_001019525.1|2378349_2379243_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000091840.1|2379349_2380603_+	MFS transporter	NA	NA	NA	NA	NA
WP_000743957.1|2380999_2381335_+	acid shock protein	NA	NA	NA	NA	NA
WP_000233090.1|2381427_2381511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001260865.1|2381610_2382432_+|protease	serine protease	protease	NA	NA	NA	NA
>prophage 5
NZ_CP047662	Escherichia coli strain LD93-1 chromosome, complete genome	4773797	2858218	2864525	4773797		Enterobacteria_phage(50.0%)	6	NA	NA
WP_001100804.1|2858218_2858764_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	57.3	3.5e-50
WP_004016728.1|2858768_2859647_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	6.6e-107
WP_004016730.1|2859705_2860605_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.2	1.3e-28
WP_000699403.1|2860604_2861690_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.6	5.7e-100
WP_044067113.1|2862062_2862956_-	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	42.0	2.3e-46
WP_094318873.1|2863130_2864525_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	31.8	6.3e-19
>prophage 6
NZ_CP047662	Escherichia coli strain LD93-1 chromosome, complete genome	4773797	2950085	2959526	4773797		Enterobacteria_phage(85.71%)	10	NA	NA
WP_001300968.1|2950085_2951222_+	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.4	3.2e-162
WP_001370558.1|2951218_2953219_+	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	95.7	0.0e+00
WP_001295429.1|2953343_2953805_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
WP_000950409.1|2953844_2954315_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	5.2e-82
WP_000598641.1|2954361_2955081_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001295431.1|2955077_2956763_-	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_001240401.1|2956984_2957716_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
WP_001216963.1|2957775_2957883_+	protein YohO	NA	NA	NA	NA	NA
WP_000783120.1|2957863_2958595_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_000569357.1|2958599_2959526_-	glycine betaine ABC transporter ATP binding protein YehX	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.8	5.7e-08
>prophage 7
NZ_CP047662	Escherichia coli strain LD93-1 chromosome, complete genome	4773797	3564565	3577748	4773797		Escherichia_phage(50.0%)	12	NA	NA
WP_001272898.1|3564565_3567127_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	1.3e-30
WP_001141322.1|3567232_3567889_+	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	46.3	6.2e-49
WP_001300386.1|3567939_3568707_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.3	7.4e-70
WP_000847985.1|3568902_3569811_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.9	3.0e-118
WP_160188247.1|3569807_3571070_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	2.8e-135
WP_001278994.1|3571066_3571705_+	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_001136934.1|3571709_3572486_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_000104441.1|3572574_3573939_+	GntP family transporter	NA	NA	NA	NA	NA
WP_000081550.1|3574032_3575025_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_001272592.1|3575087_3576227_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
WP_000254708.1|3576366_3576993_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
WP_001295182.1|3576986_3577748_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
>prophage 1
NZ_CP047663	Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence	90674	0	84135	90674	integrase,portal,tRNA,terminase,plate,holin,tail,head	Escherichia_phage(90.91%)	103	56953:56970	82204:82221
WP_001273800.1|488_974_+	TIGR02594 family protein	NA	A0A222YWL8	Escherichia_phage	100.0	3.3e-92
WP_094313941.1|1006_1204_-	hypothetical protein	NA	A0A222YWF5	Escherichia_phage	96.9	1.0e-31
WP_094313942.1|1203_1911_-	DNA-binding protein	NA	A0A222YXY0	Escherichia_phage	92.8	6.1e-119
WP_001436278.1|1910_2135_-	host cell division inhibitor Icd-like protein	NA	A0A222YWB3	Escherichia_phage	97.3	3.7e-38
WP_160188285.1|2549_3512_-	lytic replication protein	NA	A0A222YXV1	Escherichia_phage	98.1	1.8e-174
WP_032342280.1|3712_4711_-	hypothetical protein	NA	A0A222YWA7	Escherichia_phage	97.0	4.1e-177
WP_071992514.1|4724_5957_-|portal	phage portal protein	portal	A0A222YXQ7	Escherichia_phage	100.0	9.6e-237
WP_088491974.1|6491_6824_-	hypothetical protein	NA	A0A222YZ97	Escherichia_phage	98.2	2.2e-55
WP_052936022.1|6868_7426_-	DUF4145 domain-containing protein	NA	A0A222YYQ2	Escherichia_phage	98.4	2.0e-96
WP_088491973.1|7551_8916_-	hypothetical protein	NA	A0A222YY44	Escherichia_phage	98.5	3.1e-244
WP_021551757.1|9009_9378_-	hypothetical protein	NA	A0A222YWB0	Escherichia_phage	78.2	5.9e-33
WP_160188286.1|9377_11303_-|head	head protein	head	A0A222YWA3	Escherichia_phage	94.3	1.7e-309
WP_000066532.1|11295_11916_-	hypothetical protein	NA	A0A222YXB2	Escherichia_phage	99.5	1.1e-79
WP_000526264.1|11905_12352_-	hypothetical protein	NA	A0A222YXP5	Escherichia_phage	100.0	9.2e-81
WP_000457140.1|12351_12678_-|holin	holin	holin	A0A222YZ46	Escherichia_phage	100.0	3.3e-51
WP_052936025.1|12783_13344_+	recombinase family protein	NA	A0A222YWP5	Escherichia_phage	100.0	1.2e-98
WP_052936030.1|13613_14456_+|tail	phage tail protein	tail	A0A0F7LDR4	Escherichia_phage	39.1	1.4e-37
WP_032164659.1|14457_14985_+|tail	tail fiber assembly protein	tail	A0A0C4UR05	Shigella_phage	85.7	2.9e-81
WP_052936026.1|15013_15547_-|tail	tail fiber assembly protein	tail	A0A077SL44	Escherichia_phage	97.7	2.3e-94
WP_160188287.1|15549_18789_-|tail	phage tail protein	tail	Q1MVL8	Enterobacteria_phage	67.4	0.0e+00
WP_001396839.1|18791_18941_-	hypothetical protein	NA	A0A222YXS1	Escherichia_phage	98.0	7.9e-21
WP_160188288.1|19332_20178_-|tail	phage tail protein	tail	A0A222YWB7	Escherichia_phage	99.6	1.0e-160
WP_160188289.1|20188_21619_-|plate	baseplate protein	plate	A0A222YWB2	Escherichia_phage	96.8	7.4e-265
WP_104076000.1|21615_21990_-	hypothetical protein	NA	A0A222YXD0	Escherichia_phage	97.6	1.3e-64
WP_160188290.1|21995_25787_-	transglycosylase	NA	A0A222YXR4	Escherichia_phage	90.3	0.0e+00
WP_160188291.1|25801_26623_-	hypothetical protein	NA	A0A222YZ63	Escherichia_phage	99.3	1.7e-157
WP_001077897.1|27011_27767_+	RepB family plasmid replication initiator protein	NA	A0A222YYK1	Escherichia_phage	100.0	3.7e-138
WP_000021878.1|28148_28856_-	hypothetical protein	NA	A0A222YY05	Escherichia_phage	100.0	1.0e-126
WP_000187854.1|28871_29423_-	hypothetical protein	NA	A0A222YWE3	Escherichia_phage	98.9	1.3e-97
WP_000012433.1|29477_29969_-	hypothetical protein	NA	A0A222YWE4	Escherichia_phage	100.0	3.5e-89
WP_001112721.1|29977_30550_-	hypothetical protein	NA	A0A222YY02	Escherichia_phage	99.5	1.8e-100
WP_000801017.1|30617_31352_-	hypothetical protein	NA	A0A222YXT7	Escherichia_phage	100.0	5.9e-125
WP_160188292.1|31396_33055_-|tail	phage tail protein	tail	A0A222YWC8	Escherichia_phage	99.6	4.6e-311
WP_001396841.1|33122_33401_-	hypothetical protein	NA	A0A222YWH8	Escherichia_phage	100.0	3.1e-42
WP_001038834.1|33548_35246_-	hypothetical protein	NA	A0A222YWC7	Escherichia_phage	100.0	0.0e+00
WP_000331486.1|35404_35797_+	hypothetical protein	NA	A0A222YXX4	Escherichia_phage	99.2	1.5e-66
WP_000020025.1|35813_36272_+	hypothetical protein	NA	A0A222YWJ4	Escherichia_phage	100.0	2.1e-88
WP_160188293.1|36425_36884_-	hypothetical protein	NA	A0A222YWG1	Escherichia_phage	98.7	2.7e-67
WP_063112311.1|36954_37761_-	hypothetical protein	NA	A0A222YXK1	Escherichia_phage	98.9	2.9e-117
WP_001272821.1|37760_38045_-	alanine racemase	NA	A0A222YXW1	Escherichia_phage	83.0	4.0e-37
WP_032284705.1|38311_39268_+	recombinase	NA	A0A222YXF2	Escherichia_phage	99.1	3.2e-179
WP_000076909.1|39281_39620_+	plasmid stabilization protein	NA	A0A222YWJ6	Escherichia_phage	99.1	2.6e-51
WP_016262372.1|39907_40549_+	AAA family ATPase	NA	A0A222YXS3	Escherichia_phage	95.8	1.9e-111
WP_032284706.1|40541_40829_+	hypothetical protein	NA	A0A222YZA7	Escherichia_phage	97.9	5.8e-44
WP_032342063.1|41097_42759_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	99.3	0.0e+00
WP_032342062.1|42807_43713_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A222YYM0	Escherichia_phage	98.7	2.1e-172
WP_000812238.1|43705_44386_-	hypothetical protein	NA	A0A222YXN3	Escherichia_phage	100.0	5.8e-135
WP_032342061.1|44369_45275_-	recombination-associated protein RdgC	NA	A0A222YY21	Escherichia_phage	95.3	5.0e-158
WP_032342060.1|45334_45988_-	hypothetical protein	NA	A0A222YWF1	Escherichia_phage	85.7	6.5e-99
WP_000046500.1|45984_46965_-	hypothetical protein	NA	A0A222YXZ0	Escherichia_phage	100.0	2.5e-187
WP_000203292.1|46968_47736_-	hypothetical protein	NA	A0A222YWF4	Escherichia_phage	99.6	2.9e-138
WP_109157910.1|47732_48524_-|tail	phage tail protein	tail	A0A222YXU3	Escherichia_phage	98.5	2.2e-149
WP_000162415.1|48686_48989_+	hypothetical protein	NA	A0A222YWE2	Escherichia_phage	100.0	5.9e-55
WP_000806445.1|49059_49398_+	HigA family addiction module antidote protein	NA	A0A222YWD7	Escherichia_phage	100.0	1.3e-55
WP_001022420.1|49454_49655_+	hypothetical protein	NA	A0A222YXG1	Escherichia_phage	90.8	8.1e-29
WP_023908595.1|49676_50405_+	hypothetical protein	NA	A0A222YY57	Escherichia_phage	57.5	2.2e-71
WP_001112629.1|50438_51632_-	hypothetical protein	NA	A0A222YXT1	Escherichia_phage	99.5	5.7e-202
WP_000542383.1|51624_51954_-	hypothetical protein	NA	A0A222YYR0	Escherichia_phage	100.0	3.6e-58
WP_023908597.1|52282_52936_-	hypothetical protein	NA	A0A222YZ79	Escherichia_phage	98.6	1.9e-114
WP_080028516.1|53204_54116_+	hypothetical protein	NA	A0A222YYN1	Escherichia_phage	96.6	1.6e-164
WP_000201621.1|54155_54506_-	hypothetical protein	NA	A0A222YZD3	Escherichia_phage	100.0	9.2e-60
WP_112918136.1|54651_54936_-	transcriptional regulator	NA	A0A222YY28	Escherichia_phage	98.9	4.0e-45
WP_160188294.1|54995_55937_-	Rha family transcriptional regulator	NA	A0A222YWG0	Escherichia_phage	88.8	1.3e-156
56953:56970	attL	ATGTTAGAAAACTAATTT	NA	NA	NA	NA
WP_112918135.1|56963_57542_-	recombinase	NA	A0A222YXV2	Escherichia_phage	97.4	9.8e-75
WP_121334862.1|57829_58426_+	DUF4406 domain-containing protein	NA	A0A222YYT7	Escherichia_phage	97.5	5.0e-106
WP_052936027.1|58455_58740_+	DNA-binding protein	NA	A0A222YXX1	Escherichia_phage	91.5	1.8e-42
WP_139523413.1|58729_59431_+	hypothetical protein	NA	A0A222YWM9	Escherichia_phage	94.5	1.1e-112
WP_080028519.1|59430_59751_+	carboxylate--amine ligase	NA	A0A222YZB4	Escherichia_phage	86.8	2.2e-44
WP_073714438.1|59842_60118_+	DUF4752 family protein	NA	A0A222YWQ2	Escherichia_phage	95.6	5.2e-42
WP_000139733.1|60114_60339_+	hypothetical protein	NA	A0A222YYR6	Escherichia_phage	100.0	9.1e-37
WP_073714439.1|60335_60647_+	hypothetical protein	NA	A0A222YY67	Escherichia_phage	96.1	1.7e-57
WP_073714440.1|60643_61336_+	serine/threonine protein phosphatase	NA	A0A222YWF0	Escherichia_phage	95.2	2.0e-130
WP_080028521.1|61433_62429_+	DUF968 domain-containing protein	NA	A0A222YWL6	Escherichia_phage	98.8	1.3e-196
WP_069067277.1|62445_63135_+	hypothetical protein	NA	Q71T76	Escherichia_phage	70.0	4.1e-88
WP_160188295.1|63121_63808_+	hypothetical protein	NA	E7C9P6	Salmonella_phage	61.5	2.1e-44
WP_160188296.1|63804_64428_+	ead/Ea22-like family protein	NA	A0A222YWN7	Escherichia_phage	97.6	5.8e-105
WP_000797282.1|64600_64789_+	hypothetical protein	NA	A0A1I9LJM4	Stx_converting_phage	95.2	1.2e-29
WP_000951710.1|64790_65000_+	hypothetical protein	NA	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	94.2	8.8e-34
WP_074446721.1|64996_65698_+	hypothetical protein	NA	H6WRY2	Salmonella_phage	90.3	1.5e-56
WP_001142396.1|65681_65966_+	hypothetical protein	NA	A0A222YXZ5	Escherichia_phage	100.0	2.4e-05
WP_001344848.1|65950_66160_-	hypothetical protein	NA	A0A222YY00	Escherichia_phage	98.6	1.1e-31
WP_032220968.1|66333_66585_+	DNA polymerase III subunit theta	NA	A0A077SLL5	Escherichia_phage	96.4	2.3e-36
WP_088491978.1|66683_67073_+	DNA repair protein	NA	A0A077SK24	Escherichia_phage	96.1	1.6e-68
WP_001190712.1|67145_67367_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	A0A222YXU1	Escherichia_phage	100.0	6.7e-32
WP_001216041.1|67366_67747_+	type II toxin-antitoxin system death-on-curing family toxin	NA	Q71T66	Escherichia_phage	91.1	6.1e-57
WP_000432093.1|67830_68631_-	hypothetical protein	NA	A0A222YXM9	Escherichia_phage	96.9	1.6e-136
WP_160188297.1|68637_69300_-	DUF2829 domain-containing protein	NA	A0A1B0VBT1	Salmonella_phage	80.1	2.5e-98
WP_000640903.1|69314_69809_-	dUTP diphosphatase	NA	A0A222YYP1	Escherichia_phage	94.5	8.1e-86
WP_000861173.1|69805_70282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160188298.1|70278_70587_-	hypothetical protein	NA	Q5QBE7	Escherichia_phage	99.0	9.0e-51
WP_121334858.1|70696_71725_-|integrase	tyrosine-type recombinase/integrase	integrase	Q5QBN6	Enterobacteria_phage	41.6	8.7e-58
WP_047647013.1|72110_73148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047647011.1|73173_74682_-|terminase	terminase	terminase	Q5QBP2	Enterobacteria_phage	56.6	1.2e-161
WP_063074511.1|74681_75662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032342027.1|76042_76435_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032342025.1|76543_76729_-	hypothetical protein	NA	Q5QBF3	Escherichia_phage	82.0	1.5e-21
WP_000488304.1|76935_77127_-	hypothetical protein	NA	A0A222YWJ0	Escherichia_phage	100.0	3.2e-30
WP_000579539.1|78159_78324_-	DUF3927 domain-containing protein	NA	A0A222YXW5	Escherichia_phage	100.0	1.8e-18
WP_000467090.1|78323_78758_-	tellurite resistance TerB family protein	NA	A0A222YXQ0	Escherichia_phage	100.0	3.7e-74
WP_052896590.1|80971_82180_-	hypothetical protein	NA	A0A222YW83	Escherichia_phage	94.0	1.8e-216
WP_086252943.1|82806_83103_-	VRR-NUC domain-containing protein	NA	A0A222YXP1	Escherichia_phage	100.0	5.4e-53
82204:82221	attR	AAATTAGTTTTCTAACAT	NA	NA	NA	NA
WP_080077668.1|83437_83698_-	hypothetical protein	NA	A0A222YXI8	Escherichia_phage	91.9	4.2e-41
WP_000209223.1|83700_84135_-	hypothetical protein	NA	A0A222YZ35	Escherichia_phage	100.0	2.9e-79
