prefix	bacteria_id	bacteria_def	genome_size	prophage_start	prophage_end	method	key_proteins	best_hit_species	CDS_number	attl_region	attr_region
GCF_009909465.1_ASM990946v1	NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	4684883	1088296	1101479	DBSCAN-SWA		Escherichia_phage(50.0%)	12	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	4684883	1181203	1191324	DBSCAN-SWA	integrase	Enterobacteria_phage(87.5%)	11	1180184:1180197	1192694:1192707
GCF_009909465.1_ASM990946v1	NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	4684883	1702666	1712111	DBSCAN-SWA		Enterobacteria_phage(85.71%)	10	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	4684883	1802356	1808658	DBSCAN-SWA		Enterobacteria_phage(50.0%)	6	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	4684883	1817708	1878409	DBSCAN-SWA	transposase,protease,portal,head,terminase,integrase,tail,coat,lysis	Enterobacteria_phage(35.71%)	76	1810118:1810133	1850129:1850144
GCF_009909465.1_ASM990946v1	NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	4684883	2323827	2345990	DBSCAN-SWA	transposase,lysis,tail	Enterobacteria_phage(35.0%)	32	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	4684883	2620843	2633591	DBSCAN-SWA	tRNA	Escherichia_phage(69.23%)	15	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	4684883	3672151	3704094	DBSCAN-SWA	holin,integrase,lysis,terminase	Shigella_phage(54.17%)	35	3682029:3682042	3706370:3706383
GCF_009909465.1_ASM990946v1	NZ_CP047660	Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence	134831	0	67025	DBSCAN-SWA	integrase,transposase,bacteriocin	Escherichia_phage(21.43%)	40	29108:29167	59083:60414
GCF_009909465.1_ASM990946v1	NZ_CP047660	Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence	134831	75760	76501	DBSCAN-SWA		Xanthomonas_phage(100.0%)	1	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047660	Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence	134831	100679	100901	DBSCAN-SWA		Vibrio_virus(100.0%)	1	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047660	Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence	134831	108860	109682	DBSCAN-SWA		Yersinia_phage(100.0%)	1	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047660	Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence	134831	113725	116579	DBSCAN-SWA		Emiliania_huxleyi_virus(50.0%)	3	NA	NA
GCF_009909465.1_ASM990946v1	NZ_CP047660	Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence	134831	120363	132113	DBSCAN-SWA	integrase	Macacine_betaherpesvirus(66.67%)	11	119085:119099	132748:132762
GCF_009909465.1_ASM990946v1	NZ_CP047659	Escherichia coli strain LD39-1 plasmid pLD39-1-MCR1, complete sequence	251000	57775	99927	DBSCAN-SWA	integrase,transposase,protease	Escherichia_phage(30.77%)	45	52724:52737	65235:65248
GCF_009909465.1_ASM990946v1	NZ_CP047659	Escherichia coli strain LD39-1 plasmid pLD39-1-MCR1, complete sequence	251000	103265	160778	DBSCAN-SWA	integrase,transposase	Escherichia_phage(33.33%)	56	103213:103272	156766:157586
