assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009905335.1_ASM990533v1	NZ_CP047604	Klebsiella sp. MPUS7 chromosome, complete genome	1	322553-322680	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	GGCGGTGAACCTGTAGCCCGGGCAAGGCGCGTCAAGCGCCGCCCC	45	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|233aa|up_9|NZ_CP047604.1_313310_314009_-	PRK06201, PRK06201, hypothetical protein; Validated	NA|318aa|up_8|NZ_CP047604.1_314019_314973_-	cd12173, PGDH_4, Phosphoglycerate dehydrogenases, NAD-binding and catalytic domains	NA|111aa|up_7|NZ_CP047604.1_315304_315637_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|338aa|up_6|NZ_CP047604.1_315602_316616_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|139aa|up_5|NZ_CP047604.1_317020_317437_-	PRK02967, PRK02967, nickel-responsive transcriptional regulator NikR	NA|257aa|up_4|NZ_CP047604.1_317442_318213_-	PRK10419, nikE, nickel ABC transporter ATP-binding protein NikE	NA|254aa|up_3|NZ_CP047604.1_318212_318974_-	PRK10418, nikD, nickel transporter ATP-binding protein NikD; Provisional	NA|278aa|up_2|NZ_CP047604.1_318973_319807_-	PRK10417, nikC, nickel transporter permease NikC; Provisional	NA|315aa|up_1|NZ_CP047604.1_319803_320748_-	PRK10352, PRK10352, nickel transporter permease NikB; Provisional	NA|523aa|up_0|NZ_CP047604.1_320747_322316_-	TIGR02294, Nickel-binding_periplasmic_protein, nickel ABC transporter, nickel/metallophore periplasmic binding protein	NA|287aa|down_0|NZ_CP047604.1_322771_323632_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|168aa|down_1|NZ_CP047604.1_323732_324236_+	pfam05870, PA_decarbox, Phenolic acid decarboxylase (PAD)	NA|380aa|down_2|NZ_CP047604.1_324637_325777_+	PRK11658, PRK11658, UDP-4-amino-4-deoxy-L-arabinose aminotransferase	NA|328aa|down_3|NZ_CP047604.1_325778_326762_+	PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	NA|662aa|down_4|NZ_CP047604.1_326758_328744_+	PRK08125, PRK08125, bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	NA|301aa|down_5|NZ_CP047604.1_328740_329643_+	PRK15394, PRK15394, 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional	NA|552aa|down_6|NZ_CP047604.1_329642_331298_+	PRK13279, arnT, lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase	NA|113aa|down_7|NZ_CP047604.1_331294_331633_+	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional	NA|128aa|down_8|NZ_CP047604.1_331632_332016_+	PRK02971, PRK02971, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional	NA|350aa|down_9|NZ_CP047604.1_332012_333062_-	PRK12287, tqsA, pheromone autoinducer 2 transporter; Reviewed
GCF_009905335.1_ASM990533v1	NZ_CP047604	Klebsiella sp. MPUS7 chromosome, complete genome	2	1737539-1738117	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	1	1	1737629-1737660	NZ_CP047604.1_3845267-3845236	I-E:I-E:I-E	9,9,9	9	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|110aa|up_5|NZ_CP047604.1_1731205_1731535_+,NA	NA|1199aa|up_9|NZ_CP047604.1_1720088_1723685_-	pfam13569, DUF4132, Domain of unknown function (DUF4132)	NA|1240aa|up_8|NZ_CP047604.1_1723699_1727419_-	pfam13569, DUF4132, Domain of unknown function (DUF4132)	NA|678aa|up_7|NZ_CP047604.1_1727560_1729594_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|370aa|up_6|NZ_CP047604.1_1729745_1730855_+	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|110aa|up_5|NZ_CP047604.1_1731205_1731535_+	NA	NA|106aa|up_4|NZ_CP047604.1_1731594_1731912_-	COG5455, COG5455, Predicted integral membrane protein [Function unknown]	NA|307aa|up_3|NZ_CP047604.1_1732081_1733002_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|448aa|up_2|NZ_CP047604.1_1733157_1734501_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|604aa|up_1|NZ_CP047604.1_1734503_1736315_-	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism]	NA|316aa|up_0|NZ_CP047604.1_1736414_1737362_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|659aa|down_0|NZ_CP047604.1_1738184_1740161_-	COG2015, COG2015, Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|258aa|down_1|NZ_CP047604.1_1740524_1741298_+	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|267aa|down_2|NZ_CP047604.1_1741294_1742095_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|351aa|down_3|NZ_CP047604.1_1742243_1743296_+	PRK09250, PRK09250, class I fructose-bisphosphate aldolase	NA|536aa|down_4|NZ_CP047604.1_1743493_1745101_-	cd07782, FGGY_YpCarbK_like, Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases	NA|243aa|down_5|NZ_CP047604.1_1745131_1745860_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|334aa|down_6|NZ_CP047604.1_1746137_1747139_+	cd06274, PBP1_FruR, ligand binding domain of DNA transcription repressor specific for fructose (FruR) and its close homologs	NA|314aa|down_7|NZ_CP047604.1_1747160_1748102_-	pfam04198, Sugar-bind, Putative sugar-binding domain	NA|456aa|down_8|NZ_CP047604.1_1748308_1749676_+	COG0246, MtlD, Mannitol-1-phosphate/altronate dehydrogenases [Carbohydrate transport and metabolism]	NA|488aa|down_9|NZ_CP047604.1_1749685_1751149_+	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases
GCF_009905335.1_ASM990533v1	NZ_CP047604	Klebsiella sp. MPUS7 chromosome, complete genome	3	3687960-3689842	2	CRT	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	GANTCGCTGTCNGANTCCGANTC	23	5	14	3687983-3688031|3689585-3689621|3689699-3689717|3689699-3689717|3689699-3689717|3689699-3689717|3689699-3689717|3689741-3689765|3689741-3689765|3689741-3689765|3689741-3689765|3689741-3689765|3689789-3689819|3689789-3689819	NZ_CP047604.1_3686792-3686840|NZ_CP047604.1_3686882-3686918|NZ_CP047604.1_3686198-3686216|NZ_CP047604.1_3686360-3686378|NZ_CP047604.1_3687008-3687026|NZ_CP047604.1_3689849-3689867|NZ_CP047604.1_3690932-3690950|NZ_CP047604.1_3686450-3686474|NZ_CP047604.1_3686738-3686762|NZ_CP047604.1_3686756-3686780|NZ_CP047604.1_3686774-3686798|NZ_CP047604.1_3686990-3687014|NZ_CP047604.1_3686444-3686474|NZ_CP047604.1_3686534-3686564	NA	24	24	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|311aa|up_4|NZ_CP047604.1_3673872_3674805_-,NA	NA|94aa|up_9|NZ_CP047604.1_3670373_3670655_-	PRK14426, PRK14426, acylphosphatase; Provisional	NA|263aa|up_8|NZ_CP047604.1_3670706_3671495_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|185aa|up_7|NZ_CP047604.1_3671510_3672065_-	PRK09818, PRK09818, kinase inhibitor	NA|401aa|up_6|NZ_CP047604.1_3672255_3673458_+	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA|106aa|up_5|NZ_CP047604.1_3673518_3673836_+	PRK14129, PRK14129, heat shock protein HspQ; Provisional	NA|311aa|up_4|NZ_CP047604.1_3673872_3674805_-	NA	NA|1048aa|up_3|NZ_CP047604.1_3674847_3677991_-	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|402aa|up_2|NZ_CP047604.1_3678226_3679432_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|716aa|up_1|NZ_CP047604.1_3679428_3681576_-	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family	NA|479aa|up_0|NZ_CP047604.1_3681572_3683009_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|138aa|down_0|NZ_CP047604.1_3692073_3692487_-	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|153aa|down_1|NZ_CP047604.1_3692641_3693100_+	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|685aa|down_2|NZ_CP047604.1_3693128_3695183_-	PRK11054, helD, DNA helicase IV; Provisional	NA|149aa|down_3|NZ_CP047604.1_3695305_3695752_+	COG3304, COG3304, Predicted membrane protein [Function unknown]	NA|712aa|down_4|NZ_CP047604.1_3695769_3697905_+	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|208aa|down_5|NZ_CP047604.1_3697892_3698516_-	pfam04993, TfoX_N, TfoX N-terminal domain	NA|170aa|down_6|NZ_CP047604.1_3698978_3699488_+	TIGR00623, Cell_division_inhibitor_SulA, cell division inhibitor SulA	NA|357aa|down_7|NZ_CP047604.1_3699841_3700912_+	PRK10808, PRK10808, outer membrane protein A; Reviewed	NA|151aa|down_8|NZ_CP047604.1_3701007_3701460_-	PRK05097, PRK05097, macrodomain Ter protein MatP	NA|586aa|down_9|NZ_CP047604.1_3701645_3703403_+	COG1067, LonB, Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones]
GCF_009905335.1_ASM990533v1	NZ_CP047604	Klebsiella sp. MPUS7 chromosome, complete genome	4	3867471-3867607	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,WYL	Orphan	ATTCGGCTTGAGAGCCGTTTCCA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,DinG,WYL	NA|56aa|up_7|NZ_CP047604.1_3863013_3863181_-,NA|90aa|up_6|NZ_CP047604.1_3863602_3863872_-,NA|75aa|up_5|NZ_CP047604.1_3863945_3864170_-,NA|144aa|up_4|NZ_CP047604.1_3864159_3864591_-,NA|71aa|up_1|NZ_CP047604.1_3866437_3866650_-,NA|78aa|down_4|NZ_CP047604.1_3870481_3870715_+,NA|75aa|down_5|NZ_CP047604.1_3870757_3870982_+	NA|220aa|up_9|NZ_CP047604.1_3861618_3862278_-	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam)	NA|198aa|up_8|NZ_CP047604.1_3862274_3862868_-	pfam05766, NinG, Bacteriophage Lambda NinG protein	NA|56aa|up_7|NZ_CP047604.1_3863013_3863181_-	NA	NA|90aa|up_6|NZ_CP047604.1_3863602_3863872_-	NA	NA|75aa|up_5|NZ_CP047604.1_3863945_3864170_-	NA	NA|144aa|up_4|NZ_CP047604.1_3864159_3864591_-	NA	NA|359aa|up_3|NZ_CP047604.1_3864583_3865660_-	TIGR03187, hypothetical_protein, DGQHR domain	NA|263aa|up_2|NZ_CP047604.1_3865656_3866445_-	TIGR03734, PRTRC_parB, PRTRC system ParB family protein	NA|71aa|up_1|NZ_CP047604.1_3866437_3866650_-	NA	NA|98aa|up_0|NZ_CP047604.1_3866646_3866940_-	pfam04703, FaeA, FaeA-like protein	NA|138aa|down_0|NZ_CP047604.1_3868294_3868708_-	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|90aa|down_1|NZ_CP047604.1_3868707_3868977_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|169aa|down_2|NZ_CP047604.1_3869026_3869533_+	PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional	NA|98aa|down_3|NZ_CP047604.1_3870122_3870416_+	pfam06301, Lambda_Kil, Bacteriophage lambda Kil protein	NA|78aa|down_4|NZ_CP047604.1_3870481_3870715_+	NA	NA|75aa|down_5|NZ_CP047604.1_3870757_3870982_+	NA	NA|211aa|down_6|NZ_CP047604.1_3870978_3871611_+	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb	NA|72aa|down_7|NZ_CP047604.1_3871672_3871888_+	pfam06806, DUF1233, Putative excisionase (DUF1233)	NA|429aa|down_8|NZ_CP047604.1_3871887_3873174_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|209aa|down_9|NZ_CP047604.1_3873272_3873899_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
