The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047586	Corynebacterium pseudotuberculosis strain SigD chromosome, complete genome	2339309	431019	438125	2339309	tRNA	uncultured_virus(28.57%)	7	NA	NA
WP_014522127.1|431019_432075_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A291ATS8	Pandoravirus	36.4	4.8e-35
WP_004566891.1|432236_432533_+	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	59.3	3.2e-21
WP_013241276.1|432544_434167_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	50.4	3.0e-137
WP_038615729.1|434263_434545_-	WhiB family transcriptional regulator	NA	I6XD27	Mycobacterium_virus	35.6	2.5e-07
WP_053263870.1|435524_435704_+	hypothetical protein	NA	Q37953	Phage_M13mp18	98.1	1.6e-23
WP_000572405.1|436452_437247_+	aminoglycoside O-phosphotransferase APH(3')-IIa	NA	Q75ZG1	Hepacivirus	100.0	9.5e-153
WP_000027050.1|437264_438125_+	class A broad-spectrum beta-lactamase TEM-116	NA	Q38058	Escherichia_phage	100.0	3.5e-161
>prophage 2
NZ_CP047586	Corynebacterium pseudotuberculosis strain SigD chromosome, complete genome	2339309	891211	899672	2339309	holin	Pandoravirus(33.33%)	11	NA	NA
WP_014300955.1|891211_891793_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	31.4	3.0e-15
WP_086591965.1|891837_893793_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQU5	Bathycoccus_sp._RCC1105_virus	50.3	7.6e-111
WP_013242645.1|893785_894349_+	GTP cyclohydrolase I FolE	NA	A0A1W7AF02	Streptococcus_virus	57.8	3.4e-48
WP_013242644.1|894350_895133_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.2	1.9e-20
WP_013242643.1|895119_895461_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_014300954.1|895462_895918_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4W084	Pandoravirus	34.5	3.9e-10
WP_013242641.1|895914_896361_+	DUF3180 domain-containing protein	NA	NA	NA	NA	NA
WP_014300953.1|896371_896887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014300952.1|896883_897270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013242638.1|897277_897946_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_013242637.1|897923_899672_-|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	31.5	1.7e-61
>prophage 3
NZ_CP047586	Corynebacterium pseudotuberculosis strain SigD chromosome, complete genome	2339309	1035890	1104345	2339309	protease,bacteriocin	Tupanvirus(25.0%)	59	NA	NA
WP_032802571.1|1035890_1036190_+|protease	ATP-dependent Clp protease adapter ClpS	protease	NA	NA	NA	NA
WP_013242516.1|1036283_1036820_+	DUF2017 domain-containing protein	NA	NA	NA	NA	NA
WP_013242515.1|1036906_1037725_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_014401345.1|1037798_1038692_+	glutamate racemase	NA	NA	NA	NA	NA
WP_013242513.1|1038764_1039532_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_032802570.1|1039570_1040305_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_013242511.1|1040301_1040925_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_013242510.1|1040993_1041353_-	DUF3817 domain-containing protein	NA	NA	NA	NA	NA
WP_013242509.1|1041440_1041887_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013242508.1|1042470_1043133_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_014522252.1|1043212_1043542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014522251.1|1043633_1044392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014300900.1|1044572_1045604_-	DUF418 domain-containing protein	NA	NA	NA	NA	NA
WP_013242505.1|1045647_1046274_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_013242504.1|1046270_1047386_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_013242503.1|1047547_1047853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014522250.1|1048077_1057176_+	type I polyketide synthase	NA	NA	NA	NA	NA
WP_013242501.1|1057307_1057697_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_013242500.1|1057709_1058363_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013242499.1|1058400_1058880_-	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA	NA
WP_013242498.1|1058968_1059244_+	DUF3618 domain-containing protein	NA	NA	NA	NA	NA
WP_014800825.1|1059367_1059712_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_014655718.1|1059723_1060278_-	isochorismatase family protein	NA	A0A2K9L2K0	Tupanvirus	32.6	5.2e-17
WP_013242495.1|1060476_1061475_-	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014300895.1|1062258_1063449_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_013242493.1|1063502_1064330_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_013242492.1|1064509_1065169_-	oligoribonuclease	NA	M4M9I5	Vibrio_phage	35.0	8.4e-22
WP_013242491.1|1065234_1066038_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_013242490.1|1066167_1067163_-	oxidoreductase	NA	NA	NA	NA	NA
WP_013242489.1|1067438_1069265_+	S8 family peptidase	NA	A0A1B0T6A2	Bacillus_phage	31.8	3.0e-29
WP_014401336.1|1069605_1069806_-	YbdD/YjiX family protein	NA	NA	NA	NA	NA
WP_013242488.1|1069825_1072111_-	carbon starvation protein A	NA	NA	NA	NA	NA
WP_013242487.1|1072703_1074749_+	bifunctional copper resistance protein CopD/cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_013242486.1|1074839_1075763_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.1	2.5e-19
WP_013242485.1|1075759_1076518_+	permease	NA	NA	NA	NA	NA
WP_013242484.1|1076539_1077991_-	YcaO-like family protein	NA	NA	NA	NA	NA
WP_014300888.1|1078063_1078240_-|bacteriocin	thiazolylpeptide-type bacteriocin	bacteriocin	NA	NA	NA	NA
WP_013242483.1|1078278_1079259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013242482.1|1079255_1080269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014522248.1|1080268_1082872_-	lantibiotic dehydratase	NA	NA	NA	NA	NA
WP_013242480.1|1082868_1084347_-	nitroreductase	NA	NA	NA	NA	NA
WP_013242479.1|1084373_1085912_-	YcaO-like family protein	NA	NA	NA	NA	NA
WP_014300886.1|1085908_1087663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013242476.1|1088191_1088752_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_014300885.1|1088941_1090612_+	energy-dependent translational throttle protein EttA	NA	A0A2K9L0W2	Tupanvirus	28.1	6.0e-48
WP_013242474.1|1090817_1091246_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_013242473.1|1091251_1091860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013242472.1|1091863_1092760_-	DMT family transporter	NA	NA	NA	NA	NA
WP_013242471.1|1092771_1093164_-	globin	NA	NA	NA	NA	NA
WP_014300883.1|1093186_1093861_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_014367467.1|1097221_1097842_+	DSBA oxidoreductase	NA	NA	NA	NA	NA
WP_013242465.1|1097908_1098382_+	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
WP_013242464.1|1098499_1099510_+	pirin family protein	NA	NA	NA	NA	NA
WP_013242463.1|1099596_1100373_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014300878.1|1100508_1100751_-	hypothetical protein	NA	A0A1W6JRB8	Corynebacterium_phage	48.4	3.9e-09
WP_155403257.1|1100745_1100901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013242461.1|1101537_1102890_+	trigger factor	NA	NA	NA	NA	NA
WP_013242460.1|1103100_1103700_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	48.3	1.3e-42
WP_013242459.1|1103715_1104345_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	43.5	1.4e-37
