assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009866785.1_ASM986678v1	NZ_CP019432	Pseudomonas sp. S49 chromosome, complete genome	1	1778490-1778636	1	CRISPRCasFinder	no		PD-DExK,DEDDh,csa3,DinG,cas3,WYL	Orphan	TGGGAGAGGGCTAGGGTGAGGGCCTTCCAATTCTGGATTCAGCAAA	46	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	NA|644aa|up_5|NZ_CP019432.1_1765314_1767246_+,NA	NA|454aa|up_9|NZ_CP019432.1_1748491_1749853_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|720aa|up_8|NZ_CP019432.1_1749863_1752023_-	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family	NA|453aa|up_7|NZ_CP019432.1_1752180_1753539_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|2871aa|up_6|NZ_CP019432.1_1754071_1762684_+	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|644aa|up_5|NZ_CP019432.1_1765314_1767246_+	NA	NA|762aa|up_4|NZ_CP019432.1_1767470_1769756_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|703aa|up_3|NZ_CP019432.1_1770019_1772128_-	smart00635, BID_2, Bacterial Ig-like domain 2	NA|132aa|up_2|NZ_CP019432.1_1774803_1775199_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|196aa|up_1|NZ_CP019432.1_1775209_1775797_-	COG3318, COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA [General function prediction only]	NA|710aa|up_0|NZ_CP019432.1_1776193_1778323_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|145aa|down_0|NZ_CP019432.1_1778826_1779261_+	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|590aa|down_1|NZ_CP019432.1_1779388_1781158_+	COG3170, FimV, Tfp pilus assembly protein FimV [Cell motility and secretion / Intracellular trafficking and secretion]	NA|730aa|down_2|NZ_CP019432.1_1781301_1783491_-	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|96aa|down_3|NZ_CP019432.1_1783562_1783850_+	COG3526, COG3526, Uncharacterized protein conserved in bacteria [Posttranslational modification, protein turnover, chaperones]	NA|298aa|down_4|NZ_CP019432.1_1783843_1784737_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|255aa|down_5|NZ_CP019432.1_1784891_1785656_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|272aa|down_6|NZ_CP019432.1_1785790_1786606_+	COG2908, COG2908, Uncharacterized protein conserved in bacteria [Function unknown]	NA|197aa|down_7|NZ_CP019432.1_1786690_1787281_-	COG4341, COG4341, Predicted HD phosphohydrolase [General function prediction only]	NA|104aa|down_8|NZ_CP019432.1_1787295_1787607_-	pfam06127, DUF962, Protein of unknown function (DUF962)	NA|343aa|down_9|NZ_CP019432.1_1787804_1788833_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term
GCF_009866785.1_ASM986678v1	NZ_CP019432	Pseudomonas sp. S49 chromosome, complete genome	2	2179134-2179270	2	CRISPRCasFinder	no		PD-DExK,DEDDh,csa3,DinG,cas3,WYL	Orphan	TTCACTGTCATACACAAAACGTGCAAACGCTCGAGATCAGTTCCCTCTCC	50	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	NA|161aa|up_4|NZ_CP019432.1_2173636_2174119_+,NA	NA|345aa|up_9|NZ_CP019432.1_2168963_2169998_+	cd05288, PGDH, Prostaglandin dehydrogenases	NA|201aa|up_8|NZ_CP019432.1_2170065_2170668_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|383aa|up_7|NZ_CP019432.1_2170861_2172010_+	cd01160, LCAD, Long chain acyl-CoA dehydrogenase	NA|183aa|up_6|NZ_CP019432.1_2172120_2172669_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|245aa|up_5|NZ_CP019432.1_2172747_2173482_-	PRK11161, PRK11161, fumarate/nitrate reduction transcriptional regulator Fnr	NA|161aa|up_4|NZ_CP019432.1_2173636_2174119_+	NA	NA|461aa|up_3|NZ_CP019432.1_2174115_2175498_-	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|228aa|up_2|NZ_CP019432.1_2175669_2176353_-	COG2836, COG2836, Uncharacterized conserved protein [Function unknown]	NA|71aa|up_1|NZ_CP019432.1_2176345_2176558_-	COG3197, FixS, Uncharacterized protein, possibly involved in nitrogen fixation [Inorganic ion transport and metabolism]	NA|817aa|up_0|NZ_CP019432.1_2176580_2179031_-	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|180aa|down_0|NZ_CP019432.1_2179309_2179849_-	COG3198, COG3198, Uncharacterized protein conserved in bacteria [Function unknown]	NA|472aa|down_1|NZ_CP019432.1_2179860_2181276_-	TIGR02745, iron-sulfur_cluster-binding_protein, cytochrome c oxidase accessory protein FixG	NA|335aa|down_2|NZ_CP019432.1_2181800_2182805_+	COG5555, COG5555, Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]	NA|328aa|down_3|NZ_CP019432.1_2182858_2183842_-	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III	NA|62aa|down_4|NZ_CP019432.1_2183838_2184024_-	cd01324, cbb3_Oxidase_CcoQ, Cytochrome cbb oxidase CcoQ	NA|203aa|down_5|NZ_CP019432.1_2184029_2184638_-	PRK14487, PRK14487, cbb3-type cytochrome c oxidase subunit II; Provisional	NA|481aa|down_6|NZ_CP019432.1_2184637_2186080_-	PRK14488, PRK14488, cbb3-type cytochrome c oxidase subunit I; Provisional	NA|318aa|down_7|NZ_CP019432.1_2186561_2187515_-	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III	NA|66aa|down_8|NZ_CP019432.1_2187511_2187709_-	COG4736, CcoQ, Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]	NA|203aa|down_9|NZ_CP019432.1_2187714_2188323_-	PRK14487, PRK14487, cbb3-type cytochrome c oxidase subunit II; Provisional
GCF_009866785.1_ASM986678v1	NZ_CP019432	Pseudomonas sp. S49 chromosome, complete genome	3	2688388-2688481	3	CRISPRCasFinder	no	csa3	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	Type I-A	CCAGCCCAGCCACCGCAAATCCCAA	25	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	NA,NA|121aa|down_0|NZ_CP019432.1_2688920_2689283_+,NA|121aa|down_2|NZ_CP019432.1_2690351_2690714_+,NA|308aa|down_7|NZ_CP019432.1_2694489_2695413_-	NA|215aa|up_9|NZ_CP019432.1_2680586_2681231_-	sd00006, TPR, Tetratricopeptide repeat	NA|270aa|up_8|NZ_CP019432.1_2681227_2682037_-	PRK09072, PRK09072, SDR family oxidoreductase	NA|225aa|up_7|NZ_CP019432.1_2682023_2682698_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|494aa|up_6|NZ_CP019432.1_2682694_2684176_-	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases	NA|226aa|up_5|NZ_CP019432.1_2684165_2684843_-	pfam12261, T_hemolysin, Thermostable hemolysin	NA|183aa|up_4|NZ_CP019432.1_2685052_2685601_+	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|298aa|up_3|NZ_CP019432.1_2685799_2686693_+	sd00010, SLR, Sel1-like repeat	NA|71aa|up_2|NZ_CP019432.1_2686818_2687031_+	pfam14117, DUF4287, Domain of unknown function (DUF4287)	NA|168aa|up_1|NZ_CP019432.1_2687044_2687548_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|273aa|up_0|NZ_CP019432.1_2687528_2688347_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|121aa|down_0|NZ_CP019432.1_2688920_2689283_+	NA	NA|175aa|down_1|NZ_CP019432.1_2689434_2689959_+	cd10434, GIY-YIG_UvrC_Cho, Catalytic GIY-YIG domain of nucleotide excision repair endonucleases UvrC, Cho, and similar proteins	NA|121aa|down_2|NZ_CP019432.1_2690351_2690714_+	NA	NA|514aa|down_3|NZ_CP019432.1_2690850_2692392_+	pfam09994, DUF2235, Uncharacterized alpha/beta hydrolase domain (DUF2235)	NA|218aa|down_4|NZ_CP019432.1_2692391_2693045_+	pfam11153, DUF2931, Protein of unknown function (DUF2931)	NA|219aa|down_5|NZ_CP019432.1_2693077_2693734_+	pfam11153, DUF2931, Protein of unknown function (DUF2931)	NA|219aa|down_6|NZ_CP019432.1_2693744_2694401_+	pfam11153, DUF2931, Protein of unknown function (DUF2931)	NA|308aa|down_7|NZ_CP019432.1_2694489_2695413_-	NA	NA|380aa|down_8|NZ_CP019432.1_2695504_2696644_-	COG4335, COG4335, DNA alkylation repair enzyme [DNA replication, recombination, and repair]	NA|202aa|down_9|NZ_CP019432.1_2696646_2697252_-	cd03205, GST_C_6, C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases
GCF_009866785.1_ASM986678v1	NZ_CP019432	Pseudomonas sp. S49 chromosome, complete genome	4	3997714-3997858	4	CRISPRCasFinder	no	DEDDh	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	Unclear	GTCAGTCCCCTCTCCCTCCGGGAGAGGGTTAGGGTGAGGGGCT	43	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	NA|77aa|up_8|NZ_CP019432.1_3988590_3988821_+,NA|1044aa|down_6|NZ_CP019432.1_4006310_4009442_+,NA|193aa|down_8|NZ_CP019432.1_4010552_4011131_-	NA|186aa|up_9|NZ_CP019432.1_3987848_3988406_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|77aa|up_8|NZ_CP019432.1_3988590_3988821_+	NA	NA|298aa|up_7|NZ_CP019432.1_3988906_3989800_+	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold	NA|205aa|up_6|NZ_CP019432.1_3989765_3990380_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|752aa|up_5|NZ_CP019432.1_3990394_3992650_-	PRK15399, PRK15399, lysine decarboxylase	DEDDh|253aa|up_4|NZ_CP019432.1_3992853_3993612_-	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional	NA|157aa|up_3|NZ_CP019432.1_3993829_3994300_-	PRK00203, rnhA, ribonuclease H; Reviewed	NA|253aa|up_2|NZ_CP019432.1_3994390_3995149_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|256aa|up_1|NZ_CP019432.1_3995215_3995983_+	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase	NA|488aa|up_0|NZ_CP019432.1_3996082_3997546_+	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional	NA|611aa|down_0|NZ_CP019432.1_3997963_3999796_+	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|614aa|down_1|NZ_CP019432.1_3999792_4001634_+	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|358aa|down_2|NZ_CP019432.1_4001638_4002712_+	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|340aa|down_3|NZ_CP019432.1_4002713_4003733_+	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|537aa|down_4|NZ_CP019432.1_4003734_4005345_+	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]	NA|265aa|down_5|NZ_CP019432.1_4005364_4006159_+	COG0623, FabI, Enoyl-[acyl-carrier-protein]	NA|1044aa|down_6|NZ_CP019432.1_4006310_4009442_+	NA	NA|322aa|down_7|NZ_CP019432.1_4009523_4010489_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|193aa|down_8|NZ_CP019432.1_4010552_4011131_-	NA	NA|721aa|down_9|NZ_CP019432.1_4011132_4013295_-	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
GCF_009866785.1_ASM986678v1	NZ_CP019432	Pseudomonas sp. S49 chromosome, complete genome	5	5785484-5785570	5	CRISPRCasFinder	no	DEDDh	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	Unclear	TCGACCTGAAACAACGAGTCGAT	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	NA,NA|307aa|down_8|NZ_CP019432.1_5792856_5793777_+	NA|259aa|up_9|NZ_CP019432.1_5775062_5775839_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|580aa|up_8|NZ_CP019432.1_5776017_5777757_+	PRK06134, PRK06134, putative FAD-binding dehydrogenase; Reviewed	NA|278aa|up_7|NZ_CP019432.1_5777740_5778574_+	cd19140, AKR_AKR3F3, Sinorhizobium meliloti isatin reductase and similar proteins	NA|296aa|up_6|NZ_CP019432.1_5778766_5779654_+	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase	NA|318aa|up_5|NZ_CP019432.1_5779654_5780608_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|198aa|up_4|NZ_CP019432.1_5780751_5781345_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|290aa|up_3|NZ_CP019432.1_5781341_5782211_-	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism]	NA|190aa|up_2|NZ_CP019432.1_5782322_5782892_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|307aa|up_1|NZ_CP019432.1_5782974_5783895_+	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11	NA|416aa|up_0|NZ_CP019432.1_5784174_5785422_+	TIGR03862, flavo_PP4765, uncharacterized flavoprotein, PP_4765 family	NA|446aa|down_0|NZ_CP019432.1_5785720_5787058_-	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|312aa|down_1|NZ_CP019432.1_5787110_5788046_-	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|151aa|down_2|NZ_CP019432.1_5788208_5788661_+	COG1522, Lrp, Transcriptional regulators [Transcription]	DEDDh|202aa|down_3|NZ_CP019432.1_5788800_5789406_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|160aa|down_4|NZ_CP019432.1_5789423_5789903_-	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins	NA|252aa|down_5|NZ_CP019432.1_5790041_5790797_-	pfam09849, DUF2076, Uncharacterized protein conserved in bacteria (DUF2076)	NA|225aa|down_6|NZ_CP019432.1_5790975_5791650_+	PRK02868, PRK02868, hypothetical protein; Provisional	NA|360aa|down_7|NZ_CP019432.1_5791725_5792805_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|307aa|down_8|NZ_CP019432.1_5792856_5793777_+	NA	NA|279aa|down_9|NZ_CP019432.1_5793925_5794762_-	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters
GCF_009866785.1_ASM986678v1	NZ_CP019432	Pseudomonas sp. S49 chromosome, complete genome	6	5804815-5804885	6	CRISPRCasFinder	no	DEDDh	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	Unclear	TTGTTCTGCGGGCGCGGCTGATT	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,csa3,DinG,cas3,WYL	NA|307aa|up_8|NZ_CP019432.1_5792856_5793777_+,NA|140aa|up_1|NZ_CP019432.1_5802639_5803059_+,NA	NA|360aa|up_9|NZ_CP019432.1_5791725_5792805_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|307aa|up_8|NZ_CP019432.1_5792856_5793777_+	NA	NA|279aa|up_7|NZ_CP019432.1_5793925_5794762_-	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|268aa|up_6|NZ_CP019432.1_5794749_5795553_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|329aa|up_5|NZ_CP019432.1_5795563_5796550_-	cd13563, PBP2_SsuA_like_6, Putative substrate binding domain of sulfonate binding protein-like, a member of the type 2 periplasmic binding protein fold	NA|497aa|up_4|NZ_CP019432.1_5797052_5798543_-	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like	NA|305aa|up_3|NZ_CP019432.1_5798764_5799679_+	cd08412, PBP2_PAO1_like, The C-terminal substrate-binding domain of putative LysR-type transcriptional regulator PAO1-like, a member of the type 2 periplasmic binding fold protein superfamily	NA|840aa|up_2|NZ_CP019432.1_5799755_5802275_-	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB	NA|140aa|up_1|NZ_CP019432.1_5802639_5803059_+	NA	NA|303aa|up_0|NZ_CP019432.1_5803071_5803980_+	PRK09509, fieF, CDF family cation-efflux pump FieF	NA|160aa|down_0|NZ_CP019432.1_5805489_5805969_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|381aa|down_1|NZ_CP019432.1_5806050_5807193_-	pfam00665, rve, Integrase core domain	NA|70aa|down_2|NZ_CP019432.1_5807539_5807749_+	pfam10981, DUF2788, Protein of unknown function (DUF2788)	NA|179aa|down_3|NZ_CP019432.1_5807743_5808280_-	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|500aa|down_4|NZ_CP019432.1_5808449_5809949_-	PRK08292, PRK08292, AMP nucleosidase; Provisional	NA|550aa|down_5|NZ_CP019432.1_5810046_5811696_-	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional	NA|785aa|down_6|NZ_CP019432.1_5811793_5814148_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|266aa|down_7|NZ_CP019432.1_5814451_5815249_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|208aa|down_8|NZ_CP019432.1_5815267_5815891_+	PRK00043, thiE, thiamine phosphate synthase	NA|428aa|down_9|NZ_CP019432.1_5815908_5817192_+	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase
