The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019398	Pseudomonas sp. S34 chromosome, complete genome	6269896	1319968	1328674	6269896	holin	Pseudomonas_phage(42.86%)	8	NA	NA
WP_090453404.1|1319968_1320826_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	33.3	6.5e-06
WP_007990225.1|1320930_1321938_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
WP_007970729.1|1322410_1322734_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_154861808.1|1322876_1325456_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.1	2.4e-27
WP_150812917.1|1325664_1326399_+	helix-turn-helix domain-containing protein	NA	B5TK58	Pseudomonas_phage	94.3	1.4e-129
WP_150812918.1|1326571_1326913_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	66.7	5.6e-38
WP_057716659.1|1327031_1327532_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	81.9	3.3e-71
WP_007996915.1|1327615_1328674_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	58.9	2.0e-110
>prophage 2
NZ_CP019398	Pseudomonas sp. S34 chromosome, complete genome	6269896	3384033	3477809	6269896	integrase,terminase,portal,capsid,tail,holin,protease,plate,head	uncultured_Caudovirales_phage(47.62%)	100	3443247:3443262	3482277:3482292
WP_154859828.1|3384033_3384972_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_150814109.1|3385811_3386822_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_090455468.1|3386818_3388177_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	8.0e-51
WP_007975949.1|3388307_3389147_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	46.8	5.1e-64
WP_007985505.1|3389435_3389624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057714661.1|3389761_3390043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008053025.1|3390054_3390285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057714660.1|3390357_3390714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007912251.1|3390915_3391218_+	DUF1883 domain-containing protein	NA	NA	NA	NA	NA
WP_090455470.1|3391255_3391423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159390064.1|3391540_3392245_+	2OG-Fe(II) oxygenase	NA	NA	NA	NA	NA
WP_159390065.1|3392234_3392915_+	DNA oxidative demethylase AlkB	NA	NA	NA	NA	NA
WP_159390066.1|3393002_3394067_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	51.1	3.1e-18
WP_159390067.1|3394067_3395051_-	acryloyl-CoA reductase	NA	NA	NA	NA	NA
WP_159390068.1|3395205_3396273_+	DUF561 domain-containing protein	NA	NA	NA	NA	NA
WP_174245544.1|3396431_3397163_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_057714653.1|3397163_3397844_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_154859819.1|3397847_3398927_+	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	2.8e-22
WP_154859818.1|3399053_3399275_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057714650.1|3399405_3399636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057714648.1|3399842_3400127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159390069.1|3400152_3400818_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154947249.1|3400995_3401838_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_090455493.1|3401930_3402125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057714641.1|3402551_3402734_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154859815.1|3403007_3403613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150814095.1|3403841_3405389_-	phospholipase D family protein	NA	NA	NA	NA	NA
WP_159390070.1|3405405_3405555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159390406.1|3405854_3408632_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	26.4	6.5e-23
WP_150814094.1|3408855_3410160_+	MFS transporter	NA	NA	NA	NA	NA
WP_150814093.1|3410371_3411187_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_174245545.1|3411344_3412289_-	TerC family protein	NA	A0A291LBC5	Escherichia_phage	34.1	4.3e-35
WP_150814113.1|3412791_3413658_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_090455525.1|3413833_3414790_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_159390071.1|3414905_3415907_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
WP_150814091.1|3415973_3416300_+	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
WP_090455529.1|3416492_3417323_-	alpha/beta hydrolase	NA	A0A1B1SFC9	Mycobacterium_phage	26.8	1.1e-07
WP_159390407.1|3417575_3418025_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_159390072.1|3418078_3419083_-	acetoacetate decarboxylase (ADC)	NA	NA	NA	NA	NA
WP_159390408.1|3419318_3420122_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_154859805.1|3420317_3421397_+	saccharopine dehydrogenase NADP-binding domain-containing protein	NA	NA	NA	NA	NA
WP_159390073.1|3421995_3426228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154859801.1|3427038_3427416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057714624.1|3427679_3427883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159390074.1|3428786_3428996_+	hypothetical protein	NA	A0A1B0VP78	Pseudomonas_phage	55.6	3.0e-10
WP_159390075.1|3429120_3429609_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_159390076.1|3429965_3430481_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_159390077.1|3430509_3430839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159390078.1|3431203_3431458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159390079.1|3431705_3438665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159390080.1|3439013_3439289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159390081.1|3439531_3440326_-	DNA adenine methylase	NA	C7BGE1	Burkholderia_phage	65.0	1.8e-98
WP_159390082.1|3440528_3441563_-	late control protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	72.1	6.8e-143
WP_159390083.1|3441615_3441822_-|tail	tail protein X	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	67.2	1.2e-19
WP_159390084.1|3441796_3442654_-|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	64.9	2.5e-103
WP_159390085.1|3442663_3445006_-|tail	phage tail tape measure protein	tail	A0A2H4JG00	uncultured_Caudovirales_phage	37.6	1.7e-80
3443247:3443262	attL	ACCGCCAGCGCCCCGC	NA	NA	NA	NA
WP_159390086.1|3445149_3445455_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_159390087.1|3445466_3445970_-|tail	phage major tail tube protein	tail	Q7M2A5	Pseudomonas_phage	70.6	5.2e-64
WP_159390088.1|3445982_3447146_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A2H4J869	uncultured_Caudovirales_phage	77.2	8.1e-169
WP_159390089.1|3447244_3447817_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174245546.1|3447816_3448209_-|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	41.3	6.5e-22
WP_159390091.1|3450040_3450652_-|tail	phage tail protein I	tail	A0A2H4JDH5	uncultured_Caudovirales_phage	64.4	1.6e-62
WP_159390092.1|3450653_3451532_-|plate	baseplate J/gp47 family protein	plate	A0A2H4JFK9	uncultured_Caudovirales_phage	62.4	1.1e-98
WP_159390409.1|3451528_3451855_-	GPW/gp25 family protein	NA	A0A2H4JA09	uncultured_Caudovirales_phage	67.6	1.0e-36
WP_159390093.1|3451868_3452090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159390094.1|3452146_3452707_-|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	73.7	3.3e-51
WP_159390095.1|3452673_3453237_-	hypothetical protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	59.7	3.1e-49
WP_159390096.1|3453229_3453865_-	hypothetical protein	NA	A0A2H4JBV1	uncultured_Caudovirales_phage	67.6	3.8e-72
WP_159390097.1|3453861_3454176_-	hypothetical protein	NA	A0A2H4J879	uncultured_Caudovirales_phage	66.0	1.2e-31
WP_060539985.1|3454178_3455174_-|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	82.2	6.5e-159
WP_159390098.1|3455237_3455582_-|head	head decoration protein	head	A0A2H4JF15	uncultured_Caudovirales_phage	68.4	3.2e-33
WP_159390099.1|3455578_3456727_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	71.7	5.8e-143
WP_159390100.1|3456723_3458208_-|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	83.0	2.5e-239
WP_027923826.1|3458207_3458414_-	hypothetical protein	NA	A0A2H4JA19	uncultured_Caudovirales_phage	75.0	3.8e-21
WP_159390101.1|3458467_3460477_-|terminase	phage terminase large subunit family protein	terminase	A0A2H4J898	uncultured_Caudovirales_phage	81.2	0.0e+00
WP_159390102.1|3460480_3461080_-|terminase	terminase small subunit	terminase	A0A2H4JG15	uncultured_Caudovirales_phage	57.2	1.4e-52
WP_159390103.1|3461571_3462018_-	DUF1737 domain-containing protein	NA	NA	NA	NA	NA
WP_159390104.1|3462146_3462482_-|holin	phage holin, lambda family	holin	A0A1W6JTC7	Pseudomonas_phage	73.1	6.1e-37
WP_159390105.1|3462802_3463042_-	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_159390410.1|3463405_3464371_+	DUF3644 domain-containing protein	NA	NA	NA	NA	NA
WP_159390106.1|3464484_3465510_-	DUF4238 domain-containing protein	NA	NA	NA	NA	NA
WP_174245519.1|3465838_3466228_-	antitermination protein Q	NA	A0A1W6JTD2	Pseudomonas_phage	56.3	6.0e-36
WP_159390107.1|3466232_3466553_-	hypothetical protein	NA	A0A2D1GNG3	Pseudomonas_phage	53.1	9.1e-22
WP_159390108.1|3466524_3467862_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1GND4	Pseudomonas_phage	50.8	2.4e-124
WP_159390109.1|3467861_3468362_-	hypothetical protein	NA	H2BDI1	Pseudomonas_virus	37.1	2.1e-17
WP_159390110.1|3468361_3469183_-	Replication protein P	NA	A0A2D1GNB3	Pseudomonas_phage	75.0	1.4e-90
WP_159390111.1|3469182_3469929_-	hypothetical protein	NA	A0A2D1GNQ6	Pseudomonas_phage	68.7	8.4e-95
WP_159390112.1|3470301_3470922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_108217324.1|3470975_3471176_-	hypothetical protein	NA	A0A0U1UNM4	Pseudomonas_phage	50.0	1.7e-10
WP_159390113.1|3471282_3472005_+	peptidase S24	NA	F1C599	Cronobacter_phage	50.0	2.0e-48
WP_159390114.1|3472225_3472474_+	DUF1654 domain-containing protein	NA	NA	NA	NA	NA
WP_159390115.1|3472857_3473037_+	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	56.1	5.8e-10
WP_159390116.1|3473238_3473391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159390117.1|3473816_3474143_+	hypothetical protein	NA	A0A2H4J0R5	uncultured_Caudovirales_phage	32.0	9.3e-06
WP_159390118.1|3474180_3474414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159390119.1|3474807_3475011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159390120.1|3475202_3475391_+	DUF4406 domain-containing protein	NA	NA	NA	NA	NA
WP_159390121.1|3475448_3475805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159390122.1|3476569_3476776_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_159390123.1|3476777_3477809_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	56.3	1.9e-97
3482277:3482292	attR	ACCGCCAGCGCCCCGC	NA	NA	NA	NA
>prophage 3
NZ_CP019398	Pseudomonas sp. S34 chromosome, complete genome	6269896	5762273	5806893	6269896	holin,protease	Burkholderia_phage(33.33%)	41	NA	NA
WP_150813800.1|5762273_5762777_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_154861006.1|5763090_5763978_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_154861005.1|5763979_5764540_-	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
WP_154861004.1|5764765_5765797_+	RHS repeat-associated core domain-containing protein	NA	A0A1W5K0N1	Bacteriophage	41.1	9.1e-23
WP_090451825.1|5765845_5767045_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	27.0	1.3e-09
WP_150813796.1|5767248_5768106_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_150813795.1|5768262_5768895_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
WP_102672491.1|5769070_5772088_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
WP_057713000.1|5772084_5772414_-	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_007907561.1|5772428_5773679_-	sarcosine oxidase subunit beta	NA	NA	NA	NA	NA
WP_102672492.1|5773702_5774956_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.2	1.3e-100
WP_154861003.1|5775239_5775956_-	conjugal transfer protein TraX	NA	NA	NA	NA	NA
WP_154861002.1|5776112_5777153_+	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_150813793.1|5777351_5778176_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_090451831.1|5778304_5779405_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
WP_057712996.1|5779687_5780983_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
WP_154861001.1|5781789_5783010_-|protease	retroviral-like aspartic protease family protein	protease	NA	NA	NA	NA
WP_154861000.1|5783173_5783740_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_154860999.1|5783889_5784660_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_154860998.1|5784675_5785896_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_057712991.1|5785895_5787845_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA	NA
WP_057712990.1|5787979_5790040_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
WP_008048169.1|5790055_5790586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032829497.1|5790664_5791642_-	membrane dipeptidase	NA	NA	NA	NA	NA
WP_057712989.1|5791878_5792280_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_159390359.1|5792320_5792494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_102672501.1|5792492_5792747_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	65.5	2.6e-24
WP_056726566.1|5792730_5793054_+	helix-turn-helix transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	54.6	3.2e-22
WP_150813789.1|5793087_5793504_+	DUF3010 family protein	NA	NA	NA	NA	NA
WP_057712988.1|5793635_5794580_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_102672502.1|5794804_5795749_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_103396696.1|5795843_5796731_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_154860997.1|5796872_5797838_+	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
WP_090451849.1|5797992_5798469_+	thioesterase family protein	NA	NA	NA	NA	NA
WP_154860996.1|5798482_5799646_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
WP_007995656.1|5800031_5800298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007975492.1|5800410_5801514_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_057712982.1|5802046_5803423_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_057712981.1|5803858_5804806_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_057716544.1|5804872_5805718_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_047534342.1|5805714_5806893_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	37.1	1.7e-25
