The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044975	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) chromosome, complete genome	4391519	272087	281342	4391519	tRNA	Acinetobacter_phage(16.67%)	9	NA	NA
WP_159602916.1|272087_274325_-	molybdopterin-dependent oxidoreductase	NA	A0A0P0I429	Acinetobacter_phage	26.6	3.8e-05
WP_159602918.1|274336_274810_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_159602920.1|275043_275952_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_159602922.1|275988_276627_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	30.7	1.1e-18
WP_159602924.1|276636_277752_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	40.3	6.6e-27
WP_159602926.1|277758_279009_-	LysM peptidoglycan-binding domain-containing protein	NA	G9FHH0	Rhodococcus_phage	39.0	1.6e-05
WP_159602928.1|279281_279803_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.5	3.8e-17
WP_159602930.1|279799_280300_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_159602932.1|280361_281342_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.7e-10
>prophage 2
NZ_CP044975	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) chromosome, complete genome	4391519	477001	485073	4391519		Acinetobacter_phage(50.0%)	8	NA	NA
WP_159603242.1|477001_478501_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	29.3	7.3e-37
WP_159608547.1|478509_479091_+	anthranilate/aminodeoxychorismate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	58.2	4.8e-61
WP_159603244.1|479087_480155_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_159603246.1|480171_480810_+	LysE family transporter	NA	NA	NA	NA	NA
WP_159603248.1|480832_481876_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	46.7	4.1e-79
WP_159603250.1|481889_482690_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	52.1	1.5e-60
WP_159603252.1|482682_483363_+	uracil-DNA glycosylase	NA	A0A286RUF9	Beluga_whale_alphaherpesvirus	49.5	2.7e-47
WP_159603254.1|483882_485073_+	elongation factor Tu	NA	M4M9V7	Vibrio_phage	70.6	2.6e-05
>prophage 3
NZ_CP044975	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) chromosome, complete genome	4391519	1366740	1417392	4391519	tail,tRNA,plate,protease	uncultured_Mediterranean_phage(33.33%)	48	NA	NA
WP_159604583.1|1366740_1367529_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_159608609.1|1367597_1370279_-	fimbrial protein FimV	NA	NA	NA	NA	NA
WP_159604585.1|1370525_1371653_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_159604587.1|1371734_1372823_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_159604589.1|1372876_1373527_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_159604591.1|1373528_1373657_-	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_159604593.1|1373669_1375091_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_159604595.1|1375119_1376064_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_159604597.1|1376208_1377519_-	citrate synthase	NA	NA	NA	NA	NA
WP_159604598.1|1377515_1377827_-	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA	NA
WP_056271468.1|1377844_1378549_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_159604599.1|1378573_1380379_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_159604600.1|1380383_1380749_-	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA	NA
WP_159604601.1|1380779_1381211_-	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_159604602.1|1381374_1382184_-	UTRA domain-containing protein	NA	NA	NA	NA	NA
WP_159604603.1|1382398_1383385_+	malate dehydrogenase	NA	NA	NA	NA	NA
WP_159604604.1|1383493_1384402_+	CoA ester lyase	NA	NA	NA	NA	NA
WP_159604606.1|1384468_1387072_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
WP_159604608.1|1387148_1390100_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_159604610.1|1390099_1390444_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_159604612.1|1390440_1392144_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_159604614.1|1392140_1392632_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_159604616.1|1392628_1392907_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_159604618.1|1392903_1393290_+	Na+/H+ antiporter subunit G	NA	NA	NA	NA	NA
WP_159604620.1|1393290_1394142_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_159608610.1|1394252_1394672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159604622.1|1394733_1395906_-	OmpA family protein	NA	NA	NA	NA	NA
WP_159604624.1|1396260_1396584_+	collagen-like protein	NA	NA	NA	NA	NA
WP_159604626.1|1396614_1396773_+	DUF3309 family protein	NA	NA	NA	NA	NA
WP_159604628.1|1396938_1399818_+	aconitate hydratase AcnA	NA	NA	NA	NA	NA
WP_159604630.1|1399870_1400806_+|protease	trypsin-like serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	29.3	8.0e-10
WP_159604632.1|1400834_1401836_+	AAA domain-containing protein	NA	NA	NA	NA	NA
WP_159604634.1|1401852_1402938_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_159604636.1|1402934_1404002_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_159604638.1|1404036_1405293_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_159604640.1|1405289_1406276_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_159604642.1|1406547_1407135_+	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
WP_159604644.1|1407131_1407950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159604646.1|1407995_1409759_+|tail	phage tail sheath family protein	tail	J9PVC2	Bacillus_phage	30.5	2.7e-51
WP_159604648.1|1409781_1410225_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_159604650.1|1410244_1411870_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_159604652.1|1411869_1412415_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_159604654.1|1412417_1413371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159604656.1|1413388_1413559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159604658.1|1413580_1414672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159604660.1|1414668_1415355_+	type IV secretion protein Rhs	NA	NA	NA	NA	NA
WP_159604662.1|1415359_1417003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159604664.1|1417002_1417392_+|plate	baseplate assembly protein	plate	R9S7U7	Prochlorococcus_phage	33.7	1.7e-06
>prophage 4
NZ_CP044975	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) chromosome, complete genome	4391519	4243271	4252331	4391519		Escherichia_phage(28.57%)	10	NA	NA
WP_159608412.1|4243271_4244342_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	49.1	5.5e-87
WP_159608413.1|4244338_4245307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159608414.1|4245320_4246220_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	6.1e-23
WP_159608415.1|4246230_4247118_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	58.5	1.4e-96
WP_159608416.1|4247114_4247672_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	6.4e-55
WP_159608821.1|4247674_4248670_+	NAD-dependent epimerase/dehydratase family protein	NA	M1I5W5	Acanthocystis_turfacea_Chlorella_virus	52.0	5.1e-87
WP_159608417.1|4248666_4249806_+	GDP-mannose 4,6-dehydratase	NA	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	68.0	4.8e-142
WP_159608418.1|4249818_4250466_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_159608419.1|4250587_4251253_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_159608420.1|4251350_4252331_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9KZK0	Tupanvirus	46.6	6.8e-84
>prophage 1
NZ_CP044977	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-2, complete sequence	107359	17503	68185	107359	transposase,integrase	Bacillus_phage(18.75%)	43	14086:14145	68621:69987
14086:14145	attL	GGGGTCTCCTCGTTTTCAGTGCAATAAGTGACGGTACGCAAAGCTAGCACTGGCGCGGGG	NA	NA	NA	NA
WP_159609099.1|17503_17881_+|transposase	transposase	transposase	A0A218MNE7	uncultured_virus	44.6	3.6e-25
WP_068673276.1|17898_18405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083944095.1|18450_18759_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_068673274.1|19210_19909_-	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_068673272.1|19901_21080_-	muconate cycloisomerase family protein	NA	NA	NA	NA	NA
WP_068673271.1|21081_22161_-	maleylacetate reductase	NA	NA	NA	NA	NA
WP_068673269.1|22170_22506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083944094.1|22519_23068_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_159597437.1|23126_24074_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_068673263.1|24457_25204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159597438.1|25706_26354_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003158660.1|26472_29388_+|transposase	Tn3-like element IS1071 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	24.0	1.4e-52
WP_068683781.1|29633_30260_-	lytic transglycosylase domain-containing protein	NA	I1VXB7	Halocynthia_phage	43.4	5.9e-09
WP_083944708.1|30247_30886_-	S26 family signal peptidase	NA	NA	NA	NA	NA
WP_083944709.1|30815_31046_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_068683784.1|31232_31511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_068683789.1|31585_31819_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_068683790.1|31827_32337_-	DUF2285 domain-containing protein	NA	NA	NA	NA	NA
WP_068683792.1|32583_33450_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
WP_068683794.1|33446_34052_-	autoinducer synthase	NA	NA	NA	NA	NA
WP_083944710.1|34125_34911_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_159597442.1|35067_36777_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_159597443.1|36808_37633_-	hypothetical protein	NA	NA	NA	NA	NA
WP_068685872.1|37910_40259_+	indolepyruvate ferredoxin oxidoreductase subunit alpha	NA	NA	NA	NA	NA
WP_014386445.1|42030_42372_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_051705518.1|42463_44035_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	43.3	2.1e-95
WP_157103529.1|46933_47110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_068685915.1|47109_47568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_102906381.1|48274_48484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_146039730.1|48560_49532_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	37.5	1.3e-39
WP_063599743.1|49862_51428_+|transposase	IS21-like element ISPpn1 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	26.4	9.0e-14
WP_031652704.1|51417_52224_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	35.5	1.1e-31
WP_068685009.1|52505_54044_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	35.8	1.1e-45
WP_146039730.1|54372_55344_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	37.5	1.3e-39
WP_068682758.1|56390_58331_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1D8EVX7	Mycobacterium_phage	28.1	8.6e-06
WP_068682756.1|58340_58598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_068682754.1|59039_60605_+|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	27.2	4.9e-20
WP_068682752.1|60601_61372_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	6.4e-29
WP_068682762.1|61622_62708_-	ParB/RepB/Spo0J family partition protein	NA	A0A240F4U0	Ochrobactrum_phage	37.4	1.1e-05
WP_068682750.1|63492_64725_-	AAA family ATPase	NA	A0A240F4U1	Ochrobactrum_phage	31.7	5.8e-40
WP_068682748.1|65251_66622_+	replication initiation protein	NA	NA	NA	NA	NA
WP_102906383.1|67196_67604_+	helix-turn-helix domain-containing protein	NA	K4ICM4	Acidithiobacillus_phage	39.0	1.3e-17
WP_068682744.1|67603_68185_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	41.1	4.3e-30
68621:69987	attR	GGGGTCTCCTCGTTTTCAGTGCAATAAGTGACGGTACGCAAAGCTAGCACTGGCGCGGGGGTGGTCTGGGTAGACCGTTGATTTCATTGACTTTCCTGTTCGCTTTGTAAACGGGTATGGTGGCCTCCCACTTTTGAGGTTCACGATGCAGGGTTGGCACACAACGTTTTTGGGGATGCGTGGGCTCCCCCGCGATATCAGCGACTTCGAGATGAAGGCATTTTTCACCTTCGATGGTGCCGAGCGCGACGCAATCAATGCACGCCGAGGTGATTCCCACAAGCTTGGTCTGGCGCTCCATATTGGTTTCCTGCGCATGAGTGGGCGTTTGCTCGGTGCCTTTCGGGTAATTCCAGTAGCCTTGTGGCGCCACCTTGGCAACGAGCTTGGCATTGCAGCACCAGAAGTCGCCTCGCTGAGAGCCATGTATGAACGCGGGCGCACGCTATTCGATCACCAACAAGTAGCCTGCACGGTCCTTGGATTCCAGTGGATGAGCGAGCACCAGCGCCGCTCACTGGTACGTGAACTGCGCGACGAAGTGGCGCGCTGCGCCGACCGCGATCAGCTACTCGTGCGGGCGCGTCAATGGCTGTACAAGAACAAGCTGGTGATCGTGCACGAGCGGGCAATTCGGACACTGATTGCGGCGGCACTTGCCCAGCTTGAAGTTGAAACAGGCACCGCCATCGCCGCCAGCGTTGATCCAGCAACACTTGATCGCTGGCGAGCCTCAGTTTCAGAGCTGCGCCCAGATGGACAAACCCAGCAGAGTTGGCTATGGGCTGCACCGGCGAAACACTCAACCCGCCAAATCAGCGAGGTACTGGAGCGCATCGACCTGCTTTACACGCTGGACGTTCATAAGCACCTGGCAGACATCCCCGATCTCATCTTGCGCCGCTACGCGCGCCGACTTGTCTCCAGGCCGCCCTCAGCCGGAGCCAAGATCAAAGAGCCAGCGCGCACCGTGGAGGTCGCATGCTTTCTTCGGTATTGCCTGTTCACCACCACAGACCAGTTGATCCTTATGGTGCAGCGCCGGATCGCCGATCTGTGGCGTCAGGCTGCCGCCGATGTCCCCGCTACCGTCAATTGGGCCGCAATGTACAAAACGCTGCTCGGCGAACTTGTTGCCTTGAGCGCGCAAGGTGCGGTGCCAGATGCTGAGTTGCGTGCCCGTCTTGAAGCCTTGATCACCGAAACCCAGAAACGCAAACCACCGAGCAGGGCCTCCCTGGTCCGCGAGGGATTGATTGATGGAATTCGCCCCGTGCGGTCGTTGCTCGTCGCCATTGCAAAGCTGCCCTGGCAGGCCACCGGCGAGCATCCTGCCATCGAGTACCTTGCCAAGCTGCAAGCTTTAT	NA	NA	NA	NA
