assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009857995.1_ASM985799v1	NZ_CP047359	Rickettsia japonica strain LA16/2015 chromosome, complete genome	1	307358-307458	1	CRISPRCasFinder	no		cas3,DEDDh	Orphan	TAACTTTAATATATTATGTTTATAAGGTTTTTAAAA	36	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh	NA|94aa|up_4|NZ_CP047359.1_302021_302303_-,NA|95aa|up_3|NZ_CP047359.1_302908_303193_-,NA	NA|81aa|up_9|NZ_CP047359.1_298197_298440_+	TIGR01045, Uncharacterized_protein_RP474, Rickettsial palindromic element RPE1 domain	NA|160aa|up_8|NZ_CP047359.1_298332_298812_-	COG3807, COG3807, Uncharacterized protein conserved in bacteria [Function unknown]	NA|576aa|up_7|NZ_CP047359.1_298804_300532_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|109aa|up_6|NZ_CP047359.1_300528_300855_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|80aa|up_5|NZ_CP047359.1_301009_301249_+	COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]	NA|94aa|up_4|NZ_CP047359.1_302021_302303_-	NA	NA|95aa|up_3|NZ_CP047359.1_302908_303193_-	NA	NA|72aa|up_2|NZ_CP047359.1_305901_306117_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|216aa|up_1|NZ_CP047359.1_306128_306776_+	PRK01526, PRK01526, Maf-like protein; Reviewed	NA|144aa|up_0|NZ_CP047359.1_306909_307341_-	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|306aa|down_0|NZ_CP047359.1_307508_308426_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|96aa|down_1|NZ_CP047359.1_308601_308889_+	pfam09361, Phasin_2, Phasin protein	NA|201aa|down_2|NZ_CP047359.1_308936_309539_-	cd09170, PLDc_Nuc, Catalytic domain of EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins	NA|493aa|down_3|NZ_CP047359.1_310538_312017_-	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism]	NA|525aa|down_4|NZ_CP047359.1_312171_313746_-	PRK10788, PRK10788, periplasmic folding chaperone; Provisional	NA|2322aa|down_5|NZ_CP047359.1_313939_320905_-	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|745aa|down_6|NZ_CP047359.1_321234_323469_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|260aa|down_7|NZ_CP047359.1_324412_325192_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|38aa|down_8|NZ_CP047359.1_325225_325339_-	TIGR03777, RPE4, Rickettsial palindromic element RPE4 domain	NA|103aa|down_9|NZ_CP047359.1_325438_325747_+	COG2003, RadC, DNA repair proteins [DNA replication, recombination, and repair]
GCF_009857995.1_ASM985799v1	NZ_CP047359	Rickettsia japonica strain LA16/2015 chromosome, complete genome	2	902849-902950	2	CRISPRCasFinder	no		cas3,DEDDh	Orphan	ATTGCAGCAAAAATTATATCAAGAATT	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh	NA,NA|141aa|down_8|NZ_CP047359.1_911707_912130_-	NA|83aa|up_9|NZ_CP047359.1_893571_893820_-	PRK14388, PRK14388, membrane protein insertion efficiency factor YidD	NA|168aa|up_8|NZ_CP047359.1_893812_894316_-	PRK07539, PRK07539, NADH-quinone oxidoreductase subunit NuoE	NA|91aa|up_7|NZ_CP047359.1_894377_894650_-	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|392aa|up_6|NZ_CP047359.1_894739_895915_-	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D	NA|243aa|up_5|NZ_CP047359.1_896013_896742_-	PRK06074, PRK06074, NADH dehydrogenase subunit C; Provisional	NA|175aa|up_4|NZ_CP047359.1_896719_897244_-	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB	NA|124aa|up_3|NZ_CP047359.1_897248_897620_-	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated	NA|412aa|up_2|NZ_CP047359.1_897777_899013_-	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|158aa|up_1|NZ_CP047359.1_899013_899487_-	COG4765, COG4765, Uncharacterized protein conserved in bacteria [Function unknown]	NA|307aa|up_0|NZ_CP047359.1_901311_902232_+	PRK00283, xerD, tyrosine recombinase	NA|388aa|down_0|NZ_CP047359.1_903446_904610_+	pfam17422, DUF5410, Family of unknown function (DUF5410)	NA|261aa|down_1|NZ_CP047359.1_904617_905400_-	PRK06603, PRK06603, enoyl-[acyl-carrier-protein] reductase FabI	NA|505aa|down_2|NZ_CP047359.1_905475_906990_+	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|49aa|down_3|NZ_CP047359.1_907087_907234_+	pfam00157, Pou, Pou domain - N-terminal to homeobox domain	NA|268aa|down_4|NZ_CP047359.1_907685_908489_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|306aa|down_5|NZ_CP047359.1_909147_910065_+	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]	NA|280aa|down_6|NZ_CP047359.1_910069_910909_+	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|241aa|down_7|NZ_CP047359.1_910905_911628_+	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|141aa|down_8|NZ_CP047359.1_911707_912130_-	NA	NA|147aa|down_9|NZ_CP047359.1_912153_912594_-	sd00045, ANK, ankyrin repeats
