The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	0	3178	362032	protease	Lake_Baikal_phage(100.0%)	4	NA	NA
WP_011316622.1|809_1082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010999913.1|1078_1459_+|protease	clan AA aspartic protease	protease	NA	NA	NA	NA
WP_011316623.1|1581_1881_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
WP_010999911.1|2353_3178_+	DNA/RNA non-specific endonuclease	NA	A0A2H4N7Z3	Lake_Baikal_phage	31.7	1.8e-21
>prophage 2
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	22494	24357	362032		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_011316306.1|22494_24357_-	protein kinase	NA	M1HJA5	Acanthocystis_turfacea_Chlorella_virus	28.6	3.0e-08
>prophage 4
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	106556	108507	362032		Planktothrix_phage(50.0%)	2	NA	NA
WP_011316383.1|106556_107387_+	KilA-N domain-containing protein	NA	G9BWG7	Planktothrix_phage	56.0	1.3e-30
WP_011316384.1|107403_108507_+	hypothetical protein	NA	A0A1J0MF60	Staphylococcus_phage	32.8	1.0e-11
>prophage 5
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	119051	120726	362032	transposase	Geobacillus_virus(50.0%)	2	NA	NA
WP_011316395.1|119051_120257_-|transposase	transposase	transposase	A0A0H3UZC2	Geobacillus_virus	43.9	1.3e-73
WP_104010078.1|120234_120726_+|transposase	IS200/IS605 family transposase	transposase	A0A7E6	Microcystis_virus	53.1	5.7e-31
>prophage 6
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	125940	147832	362032	transposase	Paramecium_bursaria_Chlorella_virus(14.29%)	16	NA	NA
WP_011316401.1|125940_128781_-	cation-transporting P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	31.7	4.2e-78
WP_011316402.1|128940_130056_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_159368361.1|130031_130328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041457307.1|130390_134656_-	methylase	NA	A0A076FMQ0	Aureococcus_anophage	25.9	6.2e-25
WP_011316404.1|134762_135206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316406.1|136072_137017_+	RpoD/SigA family RNA polymerase sigma factor	NA	F4YCU2	Synechococcus_phage	33.1	1.4e-38
WP_153228423.1|137195_139415_+	AAA family ATPase	NA	G3MBE0	Bacillus_virus	46.4	1.5e-102
WP_011316408.1|139470_140601_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_011316409.1|140610_141399_-	ParA family protein	NA	A0A1X9I765	Streptococcus_phage	24.0	7.5e-09
WP_041457336.1|141791_142730_+	ParM/StbA family protein	NA	NA	NA	NA	NA
WP_153228422.1|142754_143066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011316415.1|143069_143771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316417.1|144145_145354_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A068A1P5	Thermus_phage	35.6	3.0e-49
WP_011316418.1|145389_145782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153228509.1|147151_147313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104010089.1|147376_147832_-	hypothetical protein	NA	U5XGX5	Phormidium_phage	38.2	5.4e-12
>prophage 7
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	163942	164974	362032	integrase	Bacillus_phage(100.0%)	1	158057:158069	165101:165113
158057:158069	attL	ATGTTTACAAAGT	NA	NA	NA	NA
WP_011316437.1|163942_164974_-|integrase	site-specific integrase	integrase	A0A1B1P7C7	Bacillus_phage	26.4	2.8e-11
WP_011316437.1|163942_164974_-|integrase	site-specific integrase	integrase	A0A1B1P7C7	Bacillus_phage	26.4	2.8e-11
165101:165113	attR	ATGTTTACAAAGT	NA	NA	NA	NA
>prophage 8
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	177692	184388	362032	transposase	Planktothrix_phage(33.33%)	7	NA	NA
WP_011316448.1|177692_178475_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	5.3e-15
WP_011316449.1|178481_178811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026101665.1|179207_179420_+	high light inducible protein	NA	F5B3V7	Synechococcus_phage	52.5	1.4e-07
WP_011316451.1|179482_179722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011316452.1|179853_180942_-|transposase	IS630-like element ISAva6 family transposase	transposase	NA	NA	NA	NA
WP_011316453.1|181636_182047_+	DUF1636 domain-containing protein	NA	NA	NA	NA	NA
WP_011316454.1|182258_184388_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	32.3	2.0e-08
>prophage 9
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	187738	191378	362032		Planktothrix_phage(50.0%)	3	NA	NA
WP_104010081.1|187738_188749_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	2.0e-14
WP_011316459.1|189201_189423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041457309.1|190175_191378_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.3	1.1e-27
>prophage 10
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	212977	225018	362032	integrase	Acinetobacter_phage(25.0%)	12	210772:210786	229396:229410
210772:210786	attL	TGAGGCGATCGCCCA	NA	NA	NA	NA
WP_104010092.1|212977_215542_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	1.1e-05
WP_104010082.1|216428_216683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316482.1|216773_217448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316483.1|217444_217912_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316484.1|217915_218947_-|integrase	site-specific integrase	integrase	A0A1B1P7C7	Bacillus_phage	26.5	3.6e-11
WP_011316485.1|219161_220283_-	sensor histidine kinase KdpD	NA	NA	NA	NA	NA
WP_011316486.1|220575_222135_-	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	27.4	4.6e-26
WP_104010093.1|222271_222814_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_011316488.1|222876_223251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316489.1|223266_223812_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316490.1|223817_224147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316491.1|224694_225018_+	YnfA family protein	NA	A0A2H4JF35	uncultured_Caudovirales_phage	54.9	1.8e-25
229396:229410	attR	TGAGGCGATCGCCCA	NA	NA	NA	NA
>prophage 11
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	228898	239230	362032		Synechococcus_phage(25.0%)	9	NA	NA
WP_011316495.1|228898_230500_-	iron uptake porin	NA	Q5GQG9	Synechococcus_phage	39.1	1.6e-10
WP_011316496.1|230548_230881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316497.1|230943_232314_-	serine/threonine protein kinase	NA	A0A2I2L395	Orpheovirus	27.0	3.3e-12
WP_011316498.1|232343_232592_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316499.1|232608_233253_-	K(+)-transporting ATPase subunit C	NA	NA	NA	NA	NA
WP_011316500.1|233252_233525_-	potassium-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_011316501.1|233547_235695_-	potassium-transporting ATPase subunit KdpB	NA	E4ZFI9	Streptococcus_phage	26.8	2.0e-35
WP_011316502.1|235781_237527_-	potassium-transporting ATPase subunit A	NA	NA	NA	NA	NA
WP_041457310.1|238129_239230_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	25.4	1.1e-13
>prophage 12
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	243171	243801	362032		Planktothrix_phage(100.0%)	1	NA	NA
WP_011316507.1|243171_243801_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	29.7	8.1e-14
>prophage 13
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	248330	261821	362032	tRNA,transposase	Acinetobacter_phage(50.0%)	8	NA	NA
WP_104010094.1|248330_250880_-	TonB-dependent siderophore receptor	NA	A0A0P0I887	Acinetobacter_phage	28.7	1.1e-08
WP_104010095.1|250948_253531_-	TonB-dependent siderophore receptor	NA	A0A0P0I887	Acinetobacter_phage	30.6	2.1e-07
WP_011316514.1|254201_254399_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_011316335.1|254970_256041_+|transposase	IS630-like element ISAva6 family transposase	transposase	NA	NA	NA	NA
WP_011316517.1|256519_257284_-	metal ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.9	5.6e-09
WP_011316518.1|257293_258400_-	zinc ABC transporter solute-binding protein	NA	NA	NA	NA	NA
WP_011316519.1|258505_259576_-	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_011316520.1|259976_261821_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	37.5	7.6e-121
>prophage 14
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	270086	272231	362032		Bacillus_phage(100.0%)	1	NA	NA
WP_041457357.1|270086_272231_-	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	27.1	1.5e-40
>prophage 15
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	275591	282509	362032		Synechococcus_phage(50.0%)	3	NA	NA
WP_011316532.1|275591_277283_+	iron uptake porin	NA	Q5GQG9	Synechococcus_phage	46.9	2.2e-10
WP_011316533.1|278553_278880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011316536.1|280259_282509_+	ATP-dependent RecD-like DNA helicase	NA	A0A0H3UZA5	Geobacillus_virus	28.6	1.7e-58
>prophage 16
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	296710	298333	362032		Phormidium_phage(100.0%)	1	NA	NA
WP_011316558.1|296710_298333_-	AAA family ATPase	NA	U5XGM6	Phormidium_phage	33.5	5.6e-59
>prophage 17
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	305117	313754	362032	transposase	Aeromonas_phage(33.33%)	5	NA	NA
WP_011316572.1|305117_308315_+	DUF3854 domain-containing protein	NA	A0A1I9KFB2	Aeromonas_phage	21.5	1.2e-12
WP_011316573.1|308448_311754_+	DEAD/DEAH box helicase	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	23.2	4.1e-08
WP_011316574.1|311846_312182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011316575.1|312181_312544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041457360.1|312545_313754_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	41.3	2.5e-72
>prophage 18
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	317230	317914	362032		Moraxella_phage(100.0%)	1	NA	NA
WP_011316581.1|317230_317914_-	thermonuclease family protein	NA	A0A0R6PHV6	Moraxella_phage	37.4	2.0e-18
>prophage 19
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	329765	335543	362032		Pacmanvirus(50.0%)	4	NA	NA
WP_011316593.1|329765_330953_-	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	33.1	8.0e-39
WP_011316594.1|330985_331945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316595.1|331962_333789_-	histidine kinase	NA	NA	NA	NA	NA
WP_011316596.1|333923_335543_-	DEAD/DEAH box helicase	NA	A0A2I7SC38	Paenibacillus_phage	30.2	1.0e-20
>prophage 20
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	338655	339462	362032		uncultured_marine_virus(100.0%)	1	NA	NA
WP_041457323.1|338655_339462_-	phosphoadenosine phosphosulfate reductase family protein	NA	A0A0F7L647	uncultured_marine_virus	37.8	5.3e-26
>prophage 21
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	350728	350959	362032		Bacteriophage(100.0%)	1	NA	NA
WP_104010098.1|350728_350959_-	helix-turn-helix transcriptional regulator	NA	A0A1L2BWW8	Bacteriophage	45.2	1.8e-08
>prophage 22
NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	362032	354224	361048	362032		Bacteriophage(33.33%)	8	NA	NA
WP_011316612.1|354224_355121_+	hypothetical protein	NA	A0A1L2BWW5	Bacteriophage	34.7	1.8e-22
WP_011316613.1|355288_355513_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011316614.1|355509_356205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011316615.1|356201_356801_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	A0A146JHL3	Tokyovirus	31.2	3.4e-14
WP_011316616.1|357029_358538_+	hypothetical protein	NA	C5IHL2	Burkholderia_virus	47.1	7.9e-15
WP_011316617.1|358540_359890_+	AAA family ATPase	NA	A0A2H4PAV8	Aphanizomenon_phage	33.4	1.8e-63
WP_011316618.1|359897_360290_+	ASCH domain-containing protein	NA	A0A291AUQ6	Sinorhizobium_phage	43.2	3.2e-21
WP_011316619.1|360286_361048_+	DNA cytosine methyltransferase	NA	A0A1L2BX52	Bacteriophage	35.6	1.8e-39
>prophage 1
NZ_CP047244	Trichormus variabilis 0441 plasmid unnamed2, complete sequence	293397	113736	131767	293397	protease,transposase,holin	Klosneuvirus(33.33%)	19	NA	NA
WP_011316799.1|113736_115293_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	38.8	5.5e-80
WP_011316800.1|115508_116450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104010108.1|116933_117551_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011316802.1|117619_118579_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011316803.1|118643_119384_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_041457409.1|119578_119902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011316805.1|120055_120847_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011316806.1|120990_121278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011316807.1|121299_121677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041457408.1|121866_122268_+	endoribonuclease L-PSP	NA	NA	NA	NA	NA
WP_041457407.1|122342_122876_+	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA	NA
WP_011316810.1|122931_123447_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_011316811.1|123464_123707_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	53.8	7.1e-11
WP_011316813.1|124285_124786_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_153228518.1|124806_125358_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011316816.1|126206_126878_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011316817.1|126970_127894_-	AAA family ATPase	NA	A0A1U9WR94	Streptococcus_virus	28.8	2.1e-10
WP_011316818.1|127890_128850_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_104009889.1|130974_131767_+|transposase	IS5-like element ISAva7 family transposase	transposase	NA	NA	NA	NA
