The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019427	Pseudomonas sp. S04 chromosome, complete genome	6098669	1273056	1281774	6098669	holin	Pseudomonas_phage(42.86%)	8	NA	NA
WP_095166837.1|1273056_1273914_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	33.3	8.4e-06
WP_095166839.1|1274018_1275023_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	3.8e-34
WP_095166841.1|1275531_1275855_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_159994051.1|1275995_1278575_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.4	1.6e-28
WP_159994053.1|1278767_1279511_+	helix-turn-helix domain-containing protein	NA	B5TK58	Pseudomonas_phage	89.9	7.1e-126
WP_159994055.1|1279695_1280037_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	66.4	4.8e-37
WP_159994057.1|1280140_1280641_+	nicotinamide-nucleotide amidohydrolase family protein	NA	B5TK85	Pseudomonas_phage	86.7	2.7e-73
WP_159994059.1|1280724_1281774_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	59.5	5.9e-110
>prophage 2
NZ_CP019427	Pseudomonas sp. S04 chromosome, complete genome	6098669	2581142	2655381	6098669	integrase,tail,capsid,holin,head,lysis,protease,transposase,terminase,plate,portal	uncultured_Caudovirales_phage(69.05%)	73	2580803:2580818	2602016:2602031
2580803:2580818	attL	CTTCGCCAGCGACATC	NA	NA	NA	NA
WP_159993658.1|2581142_2582318_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_095169634.1|2583150_2583759_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095169739.1|2583745_2584597_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_159995322.1|2584611_2585796_-	beta-ketothiolase BktB	NA	NA	NA	NA	NA
WP_159995324.1|2585972_2587016_+	AraC family transcriptional regulator ligand-binding domain-containing protein	NA	NA	NA	NA	NA
WP_159998792.1|2587106_2588945_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_159995326.1|2589027_2590317_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_095169638.1|2590342_2590900_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_159995328.1|2590923_2592270_+	glutamine synthetase	NA	NA	NA	NA	NA
WP_159995330.1|2592944_2593904_+	DUF4365 domain-containing protein	NA	NA	NA	NA	NA
WP_162530201.1|2594244_2596431_-	NTPase	NA	NA	NA	NA	NA
WP_159995332.1|2596638_2597706_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	59.4	1.9e-116
WP_159995334.1|2597708_2597975_-	DUF4224 domain-containing protein	NA	A0A2H4JF29	uncultured_Caudovirales_phage	73.7	1.9e-25
WP_159995336.1|2598134_2598377_-	pyocin activator PrtN family protein	NA	A0A2H4J8B4	uncultured_Caudovirales_phage	67.5	4.7e-23
WP_159995338.1|2598373_2598748_-	hypothetical protein	NA	A0A2H4J897	uncultured_Caudovirales_phage	75.8	1.1e-47
WP_159995340.1|2598744_2599020_-	phage antirepressor KilAC domain-containing protein	NA	A0A2H4JBX5	uncultured_Caudovirales_phage	59.3	1.0e-21
WP_159995342.1|2599030_2599405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159995344.1|2599401_2599602_-	hypothetical protein	NA	A0A2H4JG20	uncultured_Caudovirales_phage	59.1	2.4e-12
WP_159998796.1|2599739_2600417_-	helix-turn-helix domain-containing protein	NA	A0A2H4J8I0	uncultured_Caudovirales_phage	55.3	7.0e-40
WP_159995346.1|2600519_2600717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159998798.1|2600857_2601346_+	hypothetical protein	NA	A0A2H4JFM0	uncultured_Caudovirales_phage	75.0	7.8e-49
WP_159995348.1|2601338_2601545_+	TraR/DksA C4-type zinc finger protein	NA	A0A2H4JDJ0	uncultured_Caudovirales_phage	61.8	3.3e-17
WP_159995350.1|2601541_2604244_+	bifunctional DNA primase/polymerase	NA	A0A2H4JF22	uncultured_Caudovirales_phage	77.8	0.0e+00
2602016:2602031	attR	GATGTCGCTGGCGAAG	NA	NA	NA	NA
WP_159995352.1|2605225_2605576_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	51.5	1.0e-18
WP_159995354.1|2605711_2606275_+	hypothetical protein	NA	A0A2H4JG15	uncultured_Caudovirales_phage	43.8	2.5e-35
WP_159995356.1|2606279_2608304_+|terminase	phage terminase large subunit family protein	terminase	A0A2H4J898	uncultured_Caudovirales_phage	84.8	0.0e+00
WP_159995358.1|2608305_2608512_+	hypothetical protein	NA	A0A2H4JA19	uncultured_Caudovirales_phage	77.9	2.4e-23
WP_159995360.1|2608511_2609993_+|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	85.8	5.2e-245
WP_159995362.1|2609989_2611141_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	73.5	2.0e-148
WP_159995364.1|2611137_2611482_+|head	head decoration protein	head	A0A2H4JF15	uncultured_Caudovirales_phage	88.6	5.5e-49
WP_159995366.1|2611543_2612539_+|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	90.0	2.7e-173
WP_159995368.1|2612541_2612856_+	hypothetical protein	NA	A0A2H4J879	uncultured_Caudovirales_phage	59.6	3.1e-30
WP_159995370.1|2612852_2613515_+	hypothetical protein	NA	A0A2H4JBV1	uncultured_Caudovirales_phage	67.4	8.3e-78
WP_159995372.1|2613507_2614038_+	hypothetical protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	48.0	2.4e-35
WP_159995374.1|2614034_2614637_+|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	72.1	1.1e-47
WP_159995376.1|2614680_2614929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159995378.1|2614931_2615258_+	GPW/gp25 family protein	NA	A0A2H4JA09	uncultured_Caudovirales_phage	65.7	3.1e-33
WP_159995380.1|2615254_2616235_+|plate	baseplate J/gp47 family protein	plate	Q37840	Escherichia_phage	39.4	1.3e-50
WP_159995382.1|2616231_2616954_+|tail	phage tail protein I	tail	V5YTN0	Pseudomonas_phage	32.0	3.2e-14
WP_159995384.1|2616950_2617817_+|tail	phage tail protein	tail	A2I2X8	Vibrio_virus	45.7	9.1e-24
WP_159995386.1|2617822_2618572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159995388.1|2618580_2619045_+	hypothetical protein	NA	B5TK78	Pseudomonas_phage	39.5	3.7e-08
WP_159995390.1|2619111_2619435_+	hypothetical protein	NA	B0ZSG7	Halomonas_phage	43.1	5.0e-12
WP_159995392.1|2619499_2620669_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A2H4J869	uncultured_Caudovirales_phage	77.8	2.8e-169
WP_159995394.1|2620681_2621191_+|tail	phage major tail tube protein	tail	Q7M2A5	Pseudomonas_phage	68.3	1.4e-61
WP_159995396.1|2621237_2621534_+|tail	phage tail assembly protein	tail	A0A2H4J873	uncultured_Caudovirales_phage	51.6	8.7e-19
WP_159995398.1|2626215_2627061_+|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	57.9	4.2e-90
WP_159995400.1|2627035_2627242_+|tail	tail protein X	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	61.2	7.4e-17
WP_159995402.1|2627302_2628346_+	late control protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	71.3	7.1e-140
WP_159995404.1|2628383_2628932_+	glycoside hydrolase family 19 protein	NA	A0A2H4JHX4	uncultured_Caudovirales_phage	70.6	1.6e-66
WP_159995406.1|2628928_2629450_+|lysis	lysis protein	lysis	A0A2H4JBH9	uncultured_Caudovirales_phage	53.8	1.2e-31
WP_159995408.1|2629600_2630395_+	DNA adenine methylase	NA	C7BGE1	Burkholderia_phage	66.2	1.6e-99
WP_159995410.1|2630518_2630944_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	40.3	1.3e-15
WP_159995412.1|2630936_2632214_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	51.0	1.1e-110
WP_159995414.1|2632628_2633810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159995416.1|2633879_2634089_-	hypothetical protein	NA	A0A1B0VP78	Pseudomonas_phage	52.3	5.2e-10
WP_174244573.1|2634509_2634668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159995418.1|2634707_2635244_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_159995420.1|2635728_2636874_-	putative DNA binding domain-containing protein	NA	NA	NA	NA	NA
WP_159995422.1|2637409_2637619_-	hypothetical protein	NA	A0A1B0VP78	Pseudomonas_phage	56.9	2.1e-11
WP_159995424.1|2638636_2640763_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_095169714.1|2641230_2642109_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_159995426.1|2642241_2643120_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_159995428.1|2643246_2644815_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_159995430.1|2644826_2645768_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_095169718.1|2645764_2646634_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_159995432.1|2646636_2648268_+	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	8.2e-18
WP_095169720.1|2648398_2649679_+	OprD family porin	NA	NA	NA	NA	NA
WP_159995434.1|2649746_2651264_+	serine hydrolase	NA	NA	NA	NA	NA
WP_095169722.1|2651260_2652586_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_159995436.1|2652600_2654019_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_159995438.1|2654132_2654519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159995440.1|2654649_2655381_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 3
NZ_CP019427	Pseudomonas sp. S04 chromosome, complete genome	6098669	4002177	4007803	6098669		uncultured_Caudovirales_phage(83.33%)	11	NA	NA
WP_095171372.1|4002177_4002681_+	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	32.1	4.3e-10
WP_095171374.1|4002677_4003421_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_095171376.1|4003497_4003836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095171377.1|4004004_4004253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159996912.1|4004312_4004642_+	DNA repair protein	NA	NA	NA	NA	NA
WP_159996914.1|4004645_4005350_+	DUF1275 family protein	NA	NA	NA	NA	NA
WP_159996916.1|4005415_4005808_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	79.2	5.9e-55
WP_159996918.1|4005811_4006174_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	63.3	1.3e-37
WP_159996920.1|4006173_4006473_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	69.7	2.2e-33
WP_159996922.1|4006469_4006805_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	80.2	2.7e-45
WP_159996924.1|4006801_4007803_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	84.5	2.8e-162
>prophage 4
NZ_CP019427	Pseudomonas sp. S04 chromosome, complete genome	6098669	4074292	4081833	6098669	transposase	Leptospira_phage(66.67%)	7	NA	NA
WP_159996973.1|4074292_4074763_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	66.7	1.9e-52
WP_159996974.1|4074777_4075473_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	77.6	1.5e-98
WP_159998872.1|4075940_4076297_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	40.2	1.3e-16
WP_159996975.1|4076315_4077848_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	36.6	2.4e-83
WP_159996976.1|4078232_4079558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159998872.1|4079925_4080282_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	40.2	1.3e-16
WP_159996975.1|4080300_4081833_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	36.6	2.4e-83
>prophage 5
NZ_CP019427	Pseudomonas sp. S04 chromosome, complete genome	6098669	5629084	5676923	6098669	protease,holin	Tupanvirus(16.67%)	40	NA	NA
WP_159998298.1|5629084_5629591_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_159998299.1|5629876_5630764_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_095164329.1|5630771_5631317_-	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
WP_095164333.1|5631495_5632695_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	27.4	4.2e-11
WP_095164335.1|5632866_5633724_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_095164337.1|5633875_5634508_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
WP_095164338.1|5634636_5637654_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
WP_095081389.1|5637650_5637980_-	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_027617102.1|5637995_5639246_-	sarcosine oxidase subunit beta	NA	NA	NA	NA	NA
WP_095164340.1|5639270_5640524_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	7.8e-101
WP_174244600.1|5640805_5641627_-	conjugal transfer protein TraX	NA	NA	NA	NA	NA
WP_095164344.1|5641653_5642694_+	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_159998303.1|5642912_5643737_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_095164347.1|5643863_5644964_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
WP_159998305.1|5645246_5646542_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
WP_159998307.1|5647350_5648271_-	hypothetical protein	NA	A0A1W5K0N1	Bacteriophage	45.8	3.4e-21
WP_159998309.1|5648379_5649150_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_159998311.1|5649165_5650386_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_159998313.1|5650385_5652335_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA	NA
WP_095164363.1|5652498_5654559_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
WP_008033249.1|5654574_5655105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159998315.1|5655183_5656161_-	membrane dipeptidase	NA	NA	NA	NA	NA
WP_159998317.1|5656395_5656794_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_159998319.1|5656836_5657253_+	DUF3010 family protein	NA	NA	NA	NA	NA
WP_095164371.1|5657274_5658219_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_095164372.1|5658413_5659358_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_159998321.1|5659446_5660334_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_159998323.1|5660476_5661442_+	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
WP_095164378.1|5661580_5662057_+	thioesterase family protein	NA	NA	NA	NA	NA
WP_159998325.1|5662078_5663242_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
WP_159998327.1|5663587_5663851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095164384.1|5663949_5665053_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_159998329.1|5665497_5666874_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_095164388.1|5667309_5668257_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_095164390.1|5668322_5669171_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_095164392.1|5669167_5670346_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	37.6	7.7e-26
WP_095164394.1|5670547_5672545_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	27.9	4.1e-19
WP_159998331.1|5672866_5673460_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_095164398.1|5673570_5675043_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_159998333.1|5675219_5676923_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	30.1	5.0e-50
