assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009834495.1_ASM983449v1	NZ_CP019399	Pseudomonas chlororaphis strain R47 chromosome, complete genome	1	413907-414022	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	GGGCTCGTCGCTGTGAGCGTGATGAGCCCGGG	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA|147aa|up_0|NZ_CP019399.1_413259_413700_+,NA	NA|252aa|up_9|NZ_CP019399.1_405180_405936_+	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms]	NA|253aa|up_8|NZ_CP019399.1_406008_406767_-	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase	NA|437aa|up_7|NZ_CP019399.1_406930_408241_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|429aa|up_6|NZ_CP019399.1_408272_409559_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|510aa|up_5|NZ_CP019399.1_409695_411225_-	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|138aa|up_4|NZ_CP019399.1_411376_411790_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|85aa|up_3|NZ_CP019399.1_411791_412046_+	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	NA|161aa|up_2|NZ_CP019399.1_412102_412585_+	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|152aa|up_1|NZ_CP019399.1_412805_413261_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|147aa|up_0|NZ_CP019399.1_413259_413700_+	NA	NA|479aa|down_0|NZ_CP019399.1_414604_416041_-	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|362aa|down_1|NZ_CP019399.1_416037_417123_-	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|471aa|down_2|NZ_CP019399.1_417481_418894_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|300aa|down_3|NZ_CP019399.1_419089_419989_-	cd08448, PBP2_LTTR_aromatics_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to regulators involved in the catabolism of aromatic compounds, contains type 2 periplasmic binding fold	NA|574aa|down_4|NZ_CP019399.1_420101_421823_+	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product	NA|396aa|down_5|NZ_CP019399.1_421855_423043_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|265aa|down_6|NZ_CP019399.1_423112_423907_+	PRK08138, PRK08138, enoyl-CoA hydratase; Provisional	NA|509aa|down_7|NZ_CP019399.1_423903_425430_+	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated	NA|401aa|down_8|NZ_CP019399.1_425465_426668_+	PRK08131, PRK08131, 3-oxoadipyl-CoA thiolase	NA|372aa|down_9|NZ_CP019399.1_426809_427925_+	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism]
GCF_009834495.1_ASM983449v1	NZ_CP019399	Pseudomonas chlororaphis strain R47 chromosome, complete genome	2	3205713-3205870	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGGGCAAGC	51	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA,NA|177aa|down_5|NZ_CP019399.1_3211170_3211701_+,NA|63aa|down_8|NZ_CP019399.1_3214216_3214405_+	NA|723aa|up_9|NZ_CP019399.1_3191203_3193372_-	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|106aa|up_8|NZ_CP019399.1_3193485_3193803_-	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|929aa|up_7|NZ_CP019399.1_3193824_3196611_-	PRK14511, PRK14511, malto-oligosyltrehalose synthase	NA|698aa|up_6|NZ_CP019399.1_3196607_3198701_-	PRK14507, PRK14507, malto-oligosyltrehalose synthase	NA|599aa|up_5|NZ_CP019399.1_3198697_3200494_-	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase	NA|523aa|up_4|NZ_CP019399.1_3200508_3202077_-	PRK00654, glgA, glycogen synthase GlgA	NA|318aa|up_3|NZ_CP019399.1_3202564_3203518_-	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases	NA|342aa|up_2|NZ_CP019399.1_3203540_3204566_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|146aa|up_1|NZ_CP019399.1_3204699_3205137_-	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|150aa|up_0|NZ_CP019399.1_3205133_3205583_-	COG3019, COG3019, Predicted metal-binding protein [General function prediction only]	NA|305aa|down_0|NZ_CP019399.1_3205946_3206861_-	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism]	NA|128aa|down_1|NZ_CP019399.1_3206864_3207248_-	pfam04234, CopC, CopC domain	NA|310aa|down_2|NZ_CP019399.1_3207305_3208235_-	pfam05275, CopB, Copper resistance protein B precursor (CopB)	NA|611aa|down_3|NZ_CP019399.1_3208231_3210064_-	TIGR01480, unnamed_protein_product, copper-resistance protein, CopA family	NA|152aa|down_4|NZ_CP019399.1_3210186_3210642_-	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily	NA|177aa|down_5|NZ_CP019399.1_3211170_3211701_+	NA	NA|332aa|down_6|NZ_CP019399.1_3211762_3212758_-	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|306aa|down_7|NZ_CP019399.1_3212877_3213795_+	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|63aa|down_8|NZ_CP019399.1_3214216_3214405_+	NA	NA|127aa|down_9|NZ_CP019399.1_3214424_3214805_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]
GCF_009834495.1_ASM983449v1	NZ_CP019399	Pseudomonas chlororaphis strain R47 chromosome, complete genome	3	5754841-5754992	3	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	Orphan	CCAAGGCCACCACGGACCTGTAGGAGCGAGGCTTGCCCGCGATAGCGGT	49	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,RT	NA,NA	NA|125aa|up_9|NZ_CP019399.1_5744176_5744551_+	PRK02971, PRK02971, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional	NA|133aa|up_8|NZ_CP019399.1_5744583_5744982_+	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional	NA|289aa|up_7|NZ_CP019399.1_5745111_5745978_-	pfam00487, FA_desaturase, Fatty acid desaturase	NA|261aa|up_6|NZ_CP019399.1_5746502_5747285_-	pfam06629, MipA, MltA-interacting protein MipA	NA|240aa|up_5|NZ_CP019399.1_5747515_5748235_+	cd07524, HAD_Pase, phosphatase, similar to Bacillus subtilis MtnX; belongs to the haloacid dehalogenase-like superfamily	NA|465aa|up_4|NZ_CP019399.1_5748227_5749622_+	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]	NA|294aa|up_3|NZ_CP019399.1_5749618_5750500_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|376aa|up_2|NZ_CP019399.1_5750514_5751642_+	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain	NA|596aa|up_1|NZ_CP019399.1_5751638_5753426_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|466aa|up_0|NZ_CP019399.1_5753422_5754820_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|345aa|down_0|NZ_CP019399.1_5755052_5756087_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|771aa|down_1|NZ_CP019399.1_5756454_5758767_-	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|306aa|down_2|NZ_CP019399.1_5758875_5759793_+	cd08441, PBP2_MetR, The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold	NA|170aa|down_3|NZ_CP019399.1_5759826_5760336_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|213aa|down_4|NZ_CP019399.1_5760375_5761014_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|145aa|down_5|NZ_CP019399.1_5761041_5761476_-	cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|91aa|down_6|NZ_CP019399.1_5761712_5761985_-	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|540aa|down_7|NZ_CP019399.1_5762539_5764159_+	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain	NA|95aa|down_8|NZ_CP019399.1_5764227_5764512_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|99aa|down_9|NZ_CP019399.1_5764585_5764882_+	cd02226, cupin_YdbB-like, Bacillus subtilis YdbB and related proteins, cupin domain
