assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009834345.1_ASM983434v1	NZ_CP035042	Halomonas sp. BC-M4-5 chromosome, complete genome	1	447196-453763	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DEDDh,cas3,csa3,WYL,csx1,DinG	Type I-F	GTGAGCTGCCGCACACGCAGCTCAGAAA,GTGAGCTGCCGCACACGCAGCTCAGAAA,GTGAGCTGCCGCACACGCAGCTCAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	107,109,109	109	TypeI-F	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DEDDh,cas3,csa3,WYL,csx1,DinG	NA|222aa|up_7|NZ_CP035042.1_437264_437930_-,NA|125aa|down_9|NZ_CP035042.1_468074_468449_-	NA|245aa|up_9|NZ_CP035042.1_435201_435936_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|300aa|up_8|NZ_CP035042.1_436225_437125_-	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|222aa|up_7|NZ_CP035042.1_437264_437930_-	NA	NA|199aa|up_6|NZ_CP035042.1_438049_438646_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	cas1|325aa|up_5|NZ_CP035042.1_438777_439752_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1114aa|up_4|NZ_CP035042.1_439748_443090_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|450aa|up_3|NZ_CP035042.1_443119_444469_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|326aa|up_2|NZ_CP035042.1_444465_445443_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|345aa|up_1|NZ_CP035042.1_445458_446493_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|190aa|up_0|NZ_CP035042.1_446496_447066_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|197aa|down_0|NZ_CP035042.1_454941_455532_+	pfam13875, DUF4202, Domain of unknown function (DUF4202)	NA|222aa|down_1|NZ_CP035042.1_455831_456497_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|387aa|down_2|NZ_CP035042.1_456543_457704_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|248aa|down_3|NZ_CP035042.1_457708_458452_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|295aa|down_4|NZ_CP035042.1_458488_459373_+	cd13611, PBP2_YehZ, Substrate-binding domain YehZ of an osmoregulated ABC-type transporter; the type 2 periplasmic-binding protein fold	NA|442aa|down_5|NZ_CP035042.1_459446_460772_+	pfam03972, MmgE_PrpD, MmgE/PrpD family	NA|297aa|down_6|NZ_CP035042.1_462634_463525_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|310aa|down_7|NZ_CP035042.1_463676_464606_+	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|1083aa|down_8|NZ_CP035042.1_464607_467856_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|125aa|down_9|NZ_CP035042.1_468074_468449_-	NA
GCF_009834345.1_ASM983434v1	NZ_CP035042	Halomonas sp. BC-M4-5 chromosome, complete genome	2	4429141-4429282	2	CRISPRCasFinder	no		cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DEDDh,cas3,csa3,WYL,csx1,DinG	Orphan	CTGAAGAGATGCCTGACGATGTCCAGGGCGGCTCCCCGCGACTCTCC	47	0	0	NA	NA	NA	1	1	Orphan	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DEDDh,cas3,csa3,WYL,csx1,DinG	NA,NA|88aa|down_9|NZ_CP035042.1_4448588_4448852_+	NA|157aa|up_9|NZ_CP035042.1_4413471_4413942_-	PRK05302, PRK05302, 30S ribosomal protein S7; Validated	NA|1407aa|up_8|NZ_CP035042.1_4414584_4418805_-	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|1360aa|up_7|NZ_CP035042.1_4418816_4422896_-	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|125aa|up_6|NZ_CP035042.1_4423131_4423506_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|168aa|up_5|NZ_CP035042.1_4423593_4424097_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|231aa|up_4|NZ_CP035042.1_4424367_4425060_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|144aa|up_3|NZ_CP035042.1_4425062_4425494_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|178aa|up_2|NZ_CP035042.1_4425585_4426119_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|123aa|up_1|NZ_CP035042.1_4426127_4426496_-	PRK05740, secE, preprotein translocase subunit SecE; Reviewed	NA|328aa|up_0|NZ_CP035042.1_4428054_4429038_-	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|293aa|down_0|NZ_CP035042.1_4435471_4436350_-	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|339aa|down_1|NZ_CP035042.1_4436503_4437520_-	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|296aa|down_2|NZ_CP035042.1_4437701_4438589_+	PRK11716, PRK11716, HTH-type transcriptional activator IlvY	NA|164aa|down_3|NZ_CP035042.1_4438663_4439155_-	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|861aa|down_4|NZ_CP035042.1_4441398_4443981_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|252aa|down_5|NZ_CP035042.1_4444120_4444876_-	COG1496, yfiH, Multicopper polyphenol oxidase (laccase) [Secondary metabolites biosynthesis, transport and catabolism]	NA|320aa|down_6|NZ_CP035042.1_4444885_4445845_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|274aa|down_7|NZ_CP035042.1_4445964_4446786_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|544aa|down_8|NZ_CP035042.1_4446858_4448490_-	PRK13981, PRK13981, NAD synthetase; Provisional	NA|88aa|down_9|NZ_CP035042.1_4448588_4448852_+	NA
GCF_009834345.1_ASM983434v1	NZ_CP035042	Halomonas sp. BC-M4-5 chromosome, complete genome	3	4678041-4678188	3	CRISPRCasFinder	no		cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DEDDh,cas3,csa3,WYL,csx1,DinG	Orphan	GATGCCTGACGATGTCCAGGGCGGCTCTCCGCGACTCTCCATGGGAGGCCCCT	53	0	0	NA	NA	NA	1	1	Orphan	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DEDDh,cas3,csa3,WYL,csx1,DinG	NA|171aa|up_9|NZ_CP035042.1_4668987_4669500_+,NA	NA|171aa|up_9|NZ_CP035042.1_4668987_4669500_+	NA	NA|197aa|up_8|NZ_CP035042.1_4669533_4670124_-	pfam04222, DUF416, Protein of unknown function (DUF416)	NA|232aa|up_7|NZ_CP035042.1_4670521_4671217_+	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain	NA|374aa|up_6|NZ_CP035042.1_4671224_4672346_-	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional	NA|346aa|up_5|NZ_CP035042.1_4672342_4673380_-	PRK00943, PRK00943, selenide, water dikinase SelD	NA|459aa|up_4|NZ_CP035042.1_4673434_4674811_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|150aa|up_3|NZ_CP035042.1_4674913_4675363_-	pfam04170, NlpE, NlpE N-terminal domain	NA|299aa|up_2|NZ_CP035042.1_4675468_4676365_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|352aa|up_1|NZ_CP035042.1_4676480_4677536_+	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional	NA|135aa|up_0|NZ_CP035042.1_4677588_4677993_+	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein  Bacillus subtilis YwkD and similar proteins	NA|400aa|down_0|NZ_CP035042.1_4684301_4685501_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|377aa|down_1|NZ_CP035042.1_4685616_4686747_+	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|345aa|down_2|NZ_CP035042.1_4686869_4687904_-	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|237aa|down_3|NZ_CP035042.1_4687981_4688692_+	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins	NA|275aa|down_4|NZ_CP035042.1_4688750_4689575_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|197aa|down_5|NZ_CP035042.1_4689631_4690222_+	pfam02325, YGGT, YGGT family	NA|386aa|down_6|NZ_CP035042.1_4690271_4691429_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|201aa|down_7|NZ_CP035042.1_4691428_4692031_+	TIGR02081, conserved_hypothetical_protein, methionine biosynthesis protein MetW	NA|153aa|down_8|NZ_CP035042.1_4692071_4692530_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|110aa|down_9|NZ_CP035042.1_4692532_4692862_+	COG2146, {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only]
