assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	1	104344-104425	1	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	GCCGGGCGCTGCCCGGCTTGCATCAGGC	28	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|126aa|up_7|NZ_CP047135.1_94951_95329_+,NA|138aa|up_5|NZ_CP047135.1_96081_96495_+,NA|183aa|up_3|NZ_CP047135.1_97324_97873_+,NA|209aa|down_0|NZ_CP047135.1_104618_105245_-,NA|172aa|down_2|NZ_CP047135.1_105936_106452_-,NA|162aa|down_3|NZ_CP047135.1_106463_106949_-,NA|275aa|down_8|NZ_CP047135.1_110728_111553_+,NA|146aa|down_9|NZ_CP047135.1_111798_112236_-	NA|516aa|up_9|NZ_CP047135.1_92660_94208_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|244aa|up_8|NZ_CP047135.1_94161_94893_+	cd14817, D-Ala-D-Ala_dipeptidase_VanX, D-Ala-D-Ala dipeptidase VanX	NA|126aa|up_7|NZ_CP047135.1_94951_95329_+	NA	NA|139aa|up_6|NZ_CP047135.1_95552_95969_+	cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands	NA|138aa|up_5|NZ_CP047135.1_96081_96495_+	NA	NA|250aa|up_4|NZ_CP047135.1_96543_97293_+	cd07515, HAD-like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily	NA|183aa|up_3|NZ_CP047135.1_97324_97873_+	NA	NA|456aa|up_2|NZ_CP047135.1_98007_99375_+	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ	NA|505aa|up_1|NZ_CP047135.1_99426_100941_-	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase	NA|941aa|up_0|NZ_CP047135.1_101519_104342_+	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|209aa|down_0|NZ_CP047135.1_104618_105245_-	NA	NA|185aa|down_1|NZ_CP047135.1_105305_105860_-	COG1738, yhhQ, Uncharacterized member of the PurR regulon [General function prediction only]	NA|172aa|down_2|NZ_CP047135.1_105936_106452_-	NA	NA|162aa|down_3|NZ_CP047135.1_106463_106949_-	NA	NA|288aa|down_4|NZ_CP047135.1_107053_107917_-	COG4727, COG4727, Uncharacterized protein conserved in bacteria [Function unknown]	NA|323aa|down_5|NZ_CP047135.1_107954_108923_-	pfam06258, Mito_fiss_Elm1, Mitochondrial fission ELM1	NA|197aa|down_6|NZ_CP047135.1_109053_109644_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|236aa|down_7|NZ_CP047135.1_109733_110441_+	COG2353, COG2353, Uncharacterized conserved protein [Function unknown]	NA|275aa|down_8|NZ_CP047135.1_110728_111553_+	NA	NA|146aa|down_9|NZ_CP047135.1_111798_112236_-	NA
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	2	501311-501410	2	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	AGCCACCCCATGGGTGGCTGCACACC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|221aa|up_6|NZ_CP047135.1_493847_494510_+,NA|112aa|down_1|NZ_CP047135.1_501846_502182_-,NA|140aa|down_5|NZ_CP047135.1_504748_505168_-	NA|315aa|up_9|NZ_CP047135.1_490384_491329_+	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily	NA|295aa|up_8|NZ_CP047135.1_491361_492246_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|477aa|up_7|NZ_CP047135.1_492353_493784_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|221aa|up_6|NZ_CP047135.1_493847_494510_+	NA	NA|264aa|up_5|NZ_CP047135.1_494601_495393_-	COG3931, COG3931, Predicted N-formylglutamate amidohydrolase [Amino acid transport and metabolism]	NA|184aa|up_4|NZ_CP047135.1_495385_495937_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|318aa|up_3|NZ_CP047135.1_495933_496887_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|192aa|up_2|NZ_CP047135.1_496888_497464_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|770aa|up_1|NZ_CP047135.1_497795_500105_+	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|362aa|up_0|NZ_CP047135.1_500217_501303_+	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|142aa|down_0|NZ_CP047135.1_501418_501844_-	pfam11304, DUF3106, Protein of unknown function (DUF3106)	NA|112aa|down_1|NZ_CP047135.1_501846_502182_-	NA	NA|205aa|down_2|NZ_CP047135.1_502178_502793_-	PRK09047, PRK09047, RNA polymerase factor sigma-70; Validated	NA|103aa|down_3|NZ_CP047135.1_502871_503180_+	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|485aa|down_4|NZ_CP047135.1_503176_504631_+	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|140aa|down_5|NZ_CP047135.1_504748_505168_-	NA	NA|184aa|down_6|NZ_CP047135.1_505286_505838_+	TIGR03406, FeS_long_SufT, probable FeS assembly SUF system protein SufT	NA|366aa|down_7|NZ_CP047135.1_505895_506993_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|582aa|down_8|NZ_CP047135.1_507446_509192_+	cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13	NA|162aa|down_9|NZ_CP047135.1_509789_510275_-	COG0252, AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis]
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	3	764878-765018	3	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	GTAGGCACCGACCGTTGGTCGGTGC	25	0	0	NA	NA	NA	2	2	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|139aa|up_7|NZ_CP047135.1_757739_758156_+,NA|182aa|down_1|NZ_CP047135.1_765722_766268_-,NA|451aa|down_7|NZ_CP047135.1_771921_773274_+	NA|179aa|up_9|NZ_CP047135.1_756271_756808_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|254aa|up_8|NZ_CP047135.1_756871_757633_-	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]	NA|139aa|up_7|NZ_CP047135.1_757739_758156_+	NA	NA|419aa|up_6|NZ_CP047135.1_758228_759485_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|421aa|up_5|NZ_CP047135.1_759481_760744_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|255aa|up_4|NZ_CP047135.1_760743_761508_-	TIGR01978, Probable_ATP-dependent_transporter_SufC, FeS assembly ATPase SufC	NA|492aa|up_3|NZ_CP047135.1_761574_763050_-	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional	NA|151aa|up_2|NZ_CP047135.1_763066_763519_-	TIGR02944, conserved_hypothetical_protein, FeS assembly SUF system regulator, gammaproteobacterial	NA|156aa|up_1|NZ_CP047135.1_763694_764162_+	cd10518, SET_SETD1-like, SET domain (including post-SET domain) found in SET domain-containing proteins (SETD1A/SETD1B), histone-lysine N-methyltransferases (KMT2A/KMT2B/KMT2C/KMT2D) and similar proteins	NA|181aa|up_0|NZ_CP047135.1_764285_764828_+	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|199aa|down_0|NZ_CP047135.1_765027_765624_-	pfam07273, DUF1439, Protein of unknown function (DUF1439)	NA|182aa|down_1|NZ_CP047135.1_765722_766268_-	NA	NA|103aa|down_2|NZ_CP047135.1_766317_766626_-	pfam12977, DUF3861, Domain of Unknown Function with PDB structure (DUF3861)	NA|133aa|down_3|NZ_CP047135.1_766901_767300_-	cd13834, HU_like, DNA-binding proteins similar to HU domains	NA|144aa|down_4|NZ_CP047135.1_767676_768108_+	TIGR03562, osmo_induc_OsmC, peroxiredoxin, OsmC subfamily	NA|292aa|down_5|NZ_CP047135.1_768191_769067_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|868aa|down_6|NZ_CP047135.1_769247_771851_+	PRK08961, PRK08961, bifunctional aspartate kinase/diaminopimelate decarboxylase	NA|451aa|down_7|NZ_CP047135.1_771921_773274_+	NA	NA|470aa|down_8|NZ_CP047135.1_773254_774664_+	PRK04690, murD, UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA|200aa|down_9|NZ_CP047135.1_774720_775320_-	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1)
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	4	885394-885497	4	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	ACGATATCGCTGCGAAGGGCAGCCGGGCAGAGCCCGGC	38	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|258aa|up_5|NZ_CP047135.1_878805_879579_-,NA|269aa|down_6|NZ_CP047135.1_893203_894010_+	NA|168aa|up_9|NZ_CP047135.1_875827_876331_-	pfam09413, DUF2007, Putative prokaryotic signal transducing protein	NA|303aa|up_8|NZ_CP047135.1_876332_877241_-	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism]	NA|260aa|up_7|NZ_CP047135.1_877507_878287_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|148aa|up_6|NZ_CP047135.1_878321_878765_+	pfam04314, PCuAC, Copper chaperone PCu(A)C	NA|258aa|up_5|NZ_CP047135.1_878805_879579_-	NA	NA|136aa|up_4|NZ_CP047135.1_879705_880113_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|998aa|up_3|NZ_CP047135.1_880112_883106_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|106aa|up_2|NZ_CP047135.1_883400_883718_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|87aa|up_1|NZ_CP047135.1_883733_883994_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|351aa|up_0|NZ_CP047135.1_884194_885247_+	PRK12299, obgE, GTPase CgtA; Reviewed	NA|90aa|down_0|NZ_CP047135.1_885641_885911_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|535aa|down_1|NZ_CP047135.1_886027_887632_+	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|316aa|down_2|NZ_CP047135.1_887707_888655_+	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|944aa|down_3|NZ_CP047135.1_888651_891483_+	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|169aa|down_4|NZ_CP047135.1_891482_891989_+	PRK00376, lspA, lipoprotein signal peptidase	NA|317aa|down_5|NZ_CP047135.1_892044_892995_+	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|269aa|down_6|NZ_CP047135.1_893203_894010_+	NA	NA|626aa|down_7|NZ_CP047135.1_894227_896105_+	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|240aa|down_8|NZ_CP047135.1_896101_896821_+	pfam07947, YhhN, YhhN family	NA|543aa|down_9|NZ_CP047135.1_896839_898468_-	PRK13271, treA, alpha,alpha-trehalase TreA
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	5	1300603-1300758	5	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	CAGCCGACCAACGGTCGGCTCTACC	25	0	0	NA	NA	NA	2	2	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|532aa|up_9|NZ_CP047135.1_1290013_1291609_+,NA|154aa|up_8|NZ_CP047135.1_1291605_1292067_+,NA|512aa|up_7|NZ_CP047135.1_1292144_1293680_+,NA	NA|532aa|up_9|NZ_CP047135.1_1290013_1291609_+	NA	NA|154aa|up_8|NZ_CP047135.1_1291605_1292067_+	NA	NA|512aa|up_7|NZ_CP047135.1_1292144_1293680_+	NA	NA|486aa|up_6|NZ_CP047135.1_1293774_1295232_-	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|314aa|up_5|NZ_CP047135.1_1295431_1296373_+	cd00254, LT-like, lytic transglycosylase(LT)-like domain	NA|207aa|up_4|NZ_CP047135.1_1296555_1297176_+	TIGR01416, Rieske_proteo, ubiquinol-cytochrome c reductase, iron-sulfur subunit	NA|420aa|up_3|NZ_CP047135.1_1297178_1298438_+	COG1290, QcrB, Cytochrome b subunit of the bc complex [Energy production and conversion]	NA|249aa|up_2|NZ_CP047135.1_1298430_1299177_+	COG2857, CYT1, Cytochrome c1 [Energy production and conversion]	NA|212aa|up_1|NZ_CP047135.1_1299336_1299972_+	PRK09481, sspA, stringent starvation protein A; Provisional	NA|148aa|up_0|NZ_CP047135.1_1300121_1300565_+	PRK11798, PRK11798, ClpXP protease specificity-enhancing factor; Provisional	NA|119aa|down_0|NZ_CP047135.1_1300765_1301122_-	pfam11743, DUF3301, Protein of unknown function (DUF3301)	NA|368aa|down_1|NZ_CP047135.1_1301203_1302307_-	pfam10030, DUF2272, Uncharacterized protein conserved in bacteria (DUF2272)	NA|286aa|down_2|NZ_CP047135.1_1302447_1303305_-	cd01572, QPRTase, Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes	NA|90aa|down_3|NZ_CP047135.1_1303301_1303571_-	COG2835, COG2835, Uncharacterized conserved protein [Function unknown]	NA|168aa|down_4|NZ_CP047135.1_1303630_1304134_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|383aa|down_5|NZ_CP047135.1_1304130_1305279_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|194aa|down_6|NZ_CP047135.1_1305365_1305947_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|107aa|down_7|NZ_CP047135.1_1306066_1306387_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|248aa|down_8|NZ_CP047135.1_1306383_1307127_+	PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional	NA|1071aa|down_9|NZ_CP047135.1_1307453_1310666_+	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	6	1554027-1554104	6	CRISPRCasFinder	no	cas3	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Unclear	CAGCCGACCAACGGTCGGCTCTACC	25	0	0	NA	NA	NA	1	1	Unclear	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|95aa|up_3|NZ_CP047135.1_1549650_1549935_-,NA|109aa|down_9|NZ_CP047135.1_1567971_1568298_-	NA|259aa|up_9|NZ_CP047135.1_1542481_1543258_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|131aa|up_8|NZ_CP047135.1_1543305_1543698_+	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase	NA|285aa|up_7|NZ_CP047135.1_1543780_1544635_-	TIGR02431, p-hydroxybenzoate_hydroxylase_transcriptional, beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family	NA|809aa|up_6|NZ_CP047135.1_1544730_1547157_-	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|179aa|up_5|NZ_CP047135.1_1547464_1548001_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	cas3|459aa|up_4|NZ_CP047135.1_1548225_1549602_-	PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional	NA|95aa|up_3|NZ_CP047135.1_1549650_1549935_-	NA	NA|359aa|up_2|NZ_CP047135.1_1549962_1551039_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|301aa|up_1|NZ_CP047135.1_1551141_1552044_+	PRK10837, PRK10837, putative DNA-binding transcriptional regulator; Provisional	NA|628aa|up_0|NZ_CP047135.1_1552080_1553964_+	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed	NA|154aa|down_0|NZ_CP047135.1_1554108_1554570_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|135aa|down_1|NZ_CP047135.1_1554579_1554984_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|383aa|down_2|NZ_CP047135.1_1555189_1556338_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1170aa|down_3|NZ_CP047135.1_1556334_1559844_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|1030aa|down_4|NZ_CP047135.1_1559840_1562930_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|411aa|down_5|NZ_CP047135.1_1563487_1564720_-	COG1916, COG1916, Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]	NA|177aa|down_6|NZ_CP047135.1_1564712_1565243_-	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|296aa|down_7|NZ_CP047135.1_1565262_1566150_-	cd07573, CPA, N-carbamoylputrescine amidohydrolase (CPA) (class 11 nitrilases)	NA|346aa|down_8|NZ_CP047135.1_1566884_1567922_-	pfam04371, PAD_porph, Porphyromonas-type peptidyl-arginine deiminase	NA|109aa|down_9|NZ_CP047135.1_1567971_1568298_-	NA
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	7	1734511-1734616	7	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	GCAGCTGACCAACGGTCAGCTCTACC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA,NA|85aa|down_8|NZ_CP047135.1_1743207_1743462_+	NA|414aa|up_9|NZ_CP047135.1_1721317_1722559_-	PRK11790, PRK11790, phosphoglycerate dehydrogenase	NA|463aa|up_8|NZ_CP047135.1_1722745_1724134_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|100aa|up_7|NZ_CP047135.1_1724193_1724493_+	pfam09498, DUF2388, Protein of unknown function (DUF2388)	NA|606aa|up_6|NZ_CP047135.1_1724492_1726310_+	pfam13387, DUF4105, Domain of unknown function (DUF4105)	NA|355aa|up_5|NZ_CP047135.1_1726287_1727352_-	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS	NA|249aa|up_4|NZ_CP047135.1_1727351_1728098_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|391aa|up_3|NZ_CP047135.1_1728224_1729397_+	PRK09578, PRK09578, MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1038aa|up_2|NZ_CP047135.1_1730128_1733242_+	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|130aa|up_1|NZ_CP047135.1_1733243_1733633_+	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|245aa|up_0|NZ_CP047135.1_1733732_1734467_+	pfam09864, MliC, Membrane-bound lysozyme-inhibitor of c-type lysozyme	NA|189aa|down_0|NZ_CP047135.1_1734656_1735223_-	PRK04542, PRK04542, elongation factor P; Provisional	NA|257aa|down_1|NZ_CP047135.1_1735289_1736060_-	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs	NA|856aa|down_2|NZ_CP047135.1_1736138_1738706_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|298aa|down_3|NZ_CP047135.1_1738702_1739596_-	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain	NA|129aa|down_4|NZ_CP047135.1_1739787_1740174_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|263aa|down_5|NZ_CP047135.1_1740184_1740973_-	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional	NA|85aa|down_6|NZ_CP047135.1_1741097_1741352_+	pfam04023, FeoA, FeoA domain	NA|620aa|down_7|NZ_CP047135.1_1741348_1743208_+	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|85aa|down_8|NZ_CP047135.1_1743207_1743462_+	NA	NA|194aa|down_9|NZ_CP047135.1_1743805_1744387_-	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	8	2694015-2694094	8	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	AGCCGACCAACGGTCGGCTCTACCCG	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA,NA|191aa|down_8|NZ_CP047135.1_2705100_2705673_+	NA|311aa|up_9|NZ_CP047135.1_2682730_2683663_-	pfam12974, Phosphonate-bd, ABC transporter, phosphonate, periplasmic substrate-binding protein	NA|256aa|up_8|NZ_CP047135.1_2683715_2684483_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|276aa|up_7|NZ_CP047135.1_2684605_2685433_+	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|289aa|up_6|NZ_CP047135.1_2685847_2686714_-	PRK05457, PRK05457, protease HtpX	NA|295aa|up_5|NZ_CP047135.1_2686807_2687692_+	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS	NA|247aa|up_4|NZ_CP047135.1_2687765_2688506_+	TIGR01829, Acetoacetyl-CoA_reductase, acetoacetyl-CoA reductase	NA|173aa|up_3|NZ_CP047135.1_2688928_2689447_+	TIGR01848, Uncharacterized_protein_Alvin_0064, polyhydroxyalkanoate synthesis repressor PhaR	NA|316aa|up_2|NZ_CP047135.1_2689521_2690469_-	cd14789, Tiki, Tiki homology domain antagonizes Wnt function via cleavage of amino-terminal residues	NA|313aa|up_1|NZ_CP047135.1_2690472_2691411_-	COG3358, COG3358, Uncharacterized conserved protein [Function unknown]	NA|622aa|up_0|NZ_CP047135.1_2691422_2693288_-	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|521aa|down_0|NZ_CP047135.1_2694114_2695677_-	COG0860, AmiC, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|161aa|down_1|NZ_CP047135.1_2695765_2696248_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|496aa|down_2|NZ_CP047135.1_2696244_2697732_-	PRK10565, PRK10565, putative carbohydrate kinase; Provisional	NA|363aa|down_3|NZ_CP047135.1_2697755_2698844_+	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|446aa|down_4|NZ_CP047135.1_2698889_2700227_+	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|301aa|down_5|NZ_CP047135.1_2700840_2701743_-	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase	NA|624aa|down_6|NZ_CP047135.1_2701846_2703718_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|360aa|down_7|NZ_CP047135.1_2703882_2704962_+	TIGR01388, Ribonuclease_D, ribonuclease D	NA|191aa|down_8|NZ_CP047135.1_2705100_2705673_+	NA	NA|392aa|down_9|NZ_CP047135.1_2705823_2706999_+	pfam00144, Beta-lactamase, Beta-lactamase
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	9	3258420-3258525	9	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	GACGCACCGCGCCTTGCGCGGCGCAGCCGACC	32	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|97aa|up_7|NZ_CP047135.1_3248778_3249069_+,NA|104aa|up_6|NZ_CP047135.1_3249084_3249396_+,NA|271aa|up_5|NZ_CP047135.1_3249403_3250216_-,NA	NA|537aa|up_9|NZ_CP047135.1_3244963_3246574_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|574aa|up_8|NZ_CP047135.1_3246939_3248661_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|97aa|up_7|NZ_CP047135.1_3248778_3249069_+	NA	NA|104aa|up_6|NZ_CP047135.1_3249084_3249396_+	NA	NA|271aa|up_5|NZ_CP047135.1_3249403_3250216_-	NA	NA|163aa|up_4|NZ_CP047135.1_3250305_3250794_-	pfam12098, DUF3574, Protein of unknown function (DUF3574)	NA|817aa|up_3|NZ_CP047135.1_3251033_3253484_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|253aa|up_2|NZ_CP047135.1_3253685_3254444_+	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2	NA|594aa|up_1|NZ_CP047135.1_3254541_3256323_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|455aa|up_0|NZ_CP047135.1_3256319_3257684_+	TIGR02400, Alphaalpha-trehalose-phosphate_synthase, alpha,alpha-trehalose-phosphate synthase [UDP-forming]	NA|446aa|down_0|NZ_CP047135.1_3258910_3260248_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|144aa|down_1|NZ_CP047135.1_3260255_3260687_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|260aa|down_2|NZ_CP047135.1_3260691_3261471_-	COG1496, yfiH, Multicopper polyphenol oxidase (laccase) [Secondary metabolites biosynthesis, transport and catabolism]	NA|332aa|down_3|NZ_CP047135.1_3261470_3262466_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|295aa|down_4|NZ_CP047135.1_3262582_3263467_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|545aa|down_5|NZ_CP047135.1_3264932_3266567_-	PRK13981, PRK13981, NAD synthetase; Provisional	NA|292aa|down_6|NZ_CP047135.1_3266792_3267668_-	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|390aa|down_7|NZ_CP047135.1_3267689_3268859_-	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|538aa|down_8|NZ_CP047135.1_3269210_3270824_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|462aa|down_9|NZ_CP047135.1_3270912_3272298_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	10	3359284-3359398	10	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	GTAGTGCCGGGCTCTGCCCGGCAGCTCT	28	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|212aa|up_6|NZ_CP047135.1_3350980_3351616_-,NA|223aa|up_5|NZ_CP047135.1_3351911_3352580_+,NA|188aa|down_7|NZ_CP047135.1_3368660_3369224_-	NA|328aa|up_9|NZ_CP047135.1_3347929_3348913_-	PRK12680, PRK12680, LysR family transcriptional regulator	NA|320aa|up_8|NZ_CP047135.1_3349117_3350077_+	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|199aa|up_7|NZ_CP047135.1_3350323_3350920_+	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family	NA|212aa|up_6|NZ_CP047135.1_3350980_3351616_-	NA	NA|223aa|up_5|NZ_CP047135.1_3351911_3352580_+	NA	NA|432aa|up_4|NZ_CP047135.1_3352610_3353906_-	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|335aa|up_3|NZ_CP047135.1_3354264_3355269_-	NF033379, FrucBisAld_I, fructose-bisphosphate aldolase class I	NA|489aa|up_2|NZ_CP047135.1_3355436_3356903_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|222aa|up_1|NZ_CP047135.1_3357116_3357782_-	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|392aa|up_0|NZ_CP047135.1_3357781_3358957_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|455aa|down_0|NZ_CP047135.1_3359593_3360958_-	pfam13163, DUF3999, Protein of unknown function (DUF3999)	NA|899aa|down_1|NZ_CP047135.1_3360957_3363654_-	pfam10101, DUF2339, Predicted membrane protein (DUF2339)	NA|335aa|down_2|NZ_CP047135.1_3363839_3364844_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|210aa|down_3|NZ_CP047135.1_3365043_3365673_+	PRK10959, PRK10959, outer membrane protein W; Provisional	NA|234aa|down_4|NZ_CP047135.1_3366100_3366802_-	COG1794, RacX, Aspartate racemase [Cell envelope biogenesis, outer membrane]	NA|272aa|down_5|NZ_CP047135.1_3366906_3367722_+	cd11010, S1-P1_nuclease, S1/P1 nucleases and related enzymes	NA|269aa|down_6|NZ_CP047135.1_3367731_3368538_+	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|188aa|down_7|NZ_CP047135.1_3368660_3369224_-	NA	NA|409aa|down_8|NZ_CP047135.1_3369232_3370459_-	pfam05569, Peptidase_M56, BlaR1 peptidase M56	NA|122aa|down_9|NZ_CP047135.1_3370451_3370817_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	11	3642638-3642865	11	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	GTAGTTGCCGACCGTTGGTCGGCACACC	28	0	0	NA	NA	NA	3	3	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|407aa|up_5|NZ_CP047135.1_3634535_3635756_-,NA	NA|606aa|up_9|NZ_CP047135.1_3629467_3631285_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|126aa|up_8|NZ_CP047135.1_3631934_3632312_-	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only]	NA|348aa|up_7|NZ_CP047135.1_3632480_3633524_+	PRK11579, PRK11579, putative oxidoreductase; Provisional	NA|302aa|up_6|NZ_CP047135.1_3633611_3634517_-	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase	NA|407aa|up_5|NZ_CP047135.1_3634535_3635756_-	NA	NA|212aa|up_4|NZ_CP047135.1_3635826_3636462_-	pfam10001, DUF2242, Uncharacterized protein conserved in bacteria (DUF2242)	NA|726aa|up_3|NZ_CP047135.1_3636602_3638780_-	PRK11186, PRK11186, carboxy terminal-processing peptidase	NA|337aa|up_2|NZ_CP047135.1_3639381_3640392_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|236aa|up_1|NZ_CP047135.1_3640409_3641117_-	PRK14342, PRK14342, lipoyl(octanoyl) transferase LipB	NA|93aa|up_0|NZ_CP047135.1_3641104_3641383_-	PRK00907, PRK00907, hypothetical protein; Provisional	NA|405aa|down_0|NZ_CP047135.1_3643101_3644316_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|409aa|down_1|NZ_CP047135.1_3644421_3645648_-	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|382aa|down_2|NZ_CP047135.1_3645644_3646790_-	TIGR02282, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase B	NA|377aa|down_3|NZ_CP047135.1_3647547_3648678_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|371aa|down_4|NZ_CP047135.1_3648882_3649995_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|688aa|down_5|NZ_CP047135.1_3649991_3652055_-	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|162aa|down_6|NZ_CP047135.1_3652056_3652542_-	COG2891, MreD, Cell shape-determining protein [Cell envelope biogenesis, outer membrane]	NA|399aa|down_7|NZ_CP047135.1_3652538_3653735_-	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|349aa|down_8|NZ_CP047135.1_3653864_3654911_-	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|313aa|down_9|NZ_CP047135.1_3655196_3656135_+	cd01942, ribokinase_group_A, Ribokinase-like subgroup A
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	12	3931674-3931764	12	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	CCCAGCCGGGCAGAGCCCGGCTCTACGA	28	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|142aa|up_9|NZ_CP047135.1_3918620_3919046_-,NA|301aa|up_2|NZ_CP047135.1_3928013_3928916_+,NA|1233aa|down_0|NZ_CP047135.1_3931845_3935544_-	NA|142aa|up_9|NZ_CP047135.1_3918620_3919046_-	NA	NA|445aa|up_8|NZ_CP047135.1_3919042_3920377_-	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases	NA|585aa|up_7|NZ_CP047135.1_3920373_3922128_-	pfam12147, Methyltransf_20, Putative methyltransferase	NA|202aa|up_6|NZ_CP047135.1_3922166_3922772_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|843aa|up_5|NZ_CP047135.1_3922848_3925377_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|528aa|up_4|NZ_CP047135.1_3925555_3927139_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|286aa|up_3|NZ_CP047135.1_3927156_3928014_+	PRK03577, PRK03577, acid shock protein	NA|301aa|up_2|NZ_CP047135.1_3928013_3928916_+	NA	NA|428aa|up_1|NZ_CP047135.1_3928996_3930280_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|292aa|up_0|NZ_CP047135.1_3930475_3931351_-	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|1233aa|down_0|NZ_CP047135.1_3931845_3935544_-	NA	NA|4105aa|down_1|NZ_CP047135.1_3935546_3947861_-	pfam17963, Big_9, Bacterial Ig domain	NA|719aa|down_2|NZ_CP047135.1_3947940_3950097_-	COG4655, COG4655, Predicted membrane protein [Function unknown]	NA|122aa|down_3|NZ_CP047135.1_3950414_3950780_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|236aa|down_4|NZ_CP047135.1_3950810_3951518_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|281aa|down_5|NZ_CP047135.1_3951514_3952357_-	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs)	NA|317aa|down_6|NZ_CP047135.1_3952364_3953315_-	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|229aa|down_7|NZ_CP047135.1_3953311_3953998_-	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|575aa|down_8|NZ_CP047135.1_3954217_3955942_-	PRK04537, PRK04537, ATP-dependent RNA helicase RhlB; Provisional	NA|110aa|down_9|NZ_CP047135.1_3956510_3956840_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	13	4514362-4514456	13	CRISPRCasFinder	no	cas3	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Unclear	GCCGGGCAGAGCCCGGCGCTACG	23	0	0	NA	NA	NA	1	1	Unclear	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|326aa|up_8|NZ_CP047135.1_4504121_4505099_+,NA|114aa|down_3|NZ_CP047135.1_4520740_4521082_-	NA|276aa|up_9|NZ_CP047135.1_4503051_4503879_+	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms	NA|326aa|up_8|NZ_CP047135.1_4504121_4505099_+	NA	NA|901aa|up_7|NZ_CP047135.1_4505098_4507801_+	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB	NA|68aa|up_6|NZ_CP047135.1_4508094_4508298_-	pfam04325, DUF465, Protein of unknown function (DUF465)	NA|305aa|up_5|NZ_CP047135.1_4508394_4509309_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|302aa|up_4|NZ_CP047135.1_4509355_4510261_+	PRK00321, rdgC, recombination associated protein; Reviewed	NA|263aa|up_3|NZ_CP047135.1_4510462_4511251_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|291aa|up_2|NZ_CP047135.1_4511458_4512331_-	cd01422, MGS, Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal	NA|97aa|up_1|NZ_CP047135.1_4512498_4512789_+	PRK10876, recB, exonuclease V subunit beta; Provisional	NA|482aa|up_0|NZ_CP047135.1_4512891_4514337_-	TIGR01318, glutamate_synthase_small_subunit_gltD, glutamate synthase small subunit family protein, proteobacterial	NA|1485aa|down_0|NZ_CP047135.1_4514497_4518952_-	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|134aa|down_1|NZ_CP047135.1_4519129_4519531_-	pfam11720, Inhibitor_I78, Peptidase inhibitor I78 family	NA|355aa|down_2|NZ_CP047135.1_4519666_4520731_+	COG3569, COG3569, Topoisomerase IB [DNA replication, recombination, and repair]	NA|114aa|down_3|NZ_CP047135.1_4520740_4521082_-	NA	NA|343aa|down_4|NZ_CP047135.1_4521321_4522350_+	PRK06701, PRK06701, short chain dehydrogenase; Provisional	NA|393aa|down_5|NZ_CP047135.1_4522461_4523640_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|129aa|down_6|NZ_CP047135.1_4523841_4524228_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|601aa|down_7|NZ_CP047135.1_4524231_4526034_+	pfam05569, Peptidase_M56, BlaR1 peptidase M56	NA|107aa|down_8|NZ_CP047135.1_4526094_4526415_-	pfam11720, Inhibitor_I78, Peptidase inhibitor I78 family	NA|372aa|down_9|NZ_CP047135.1_4526493_4527609_-	pfam13482, RNase_H_2, RNase_H superfamily
GCF_009832905.1_ASM983290v1	NZ_CP047135	Stenotrophomonas sp. 364 chromosome, complete genome	14	4589866-4589948	14	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	Orphan	CAGGTAGAGCCGACCGTCGGTCGGC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas3,Cas9_archaeal,DinG	NA|296aa|up_9|NZ_CP047135.1_4580832_4581720_-,NA|145aa|up_3|NZ_CP047135.1_4587091_4587526_+,NA|394aa|down_1|NZ_CP047135.1_4591197_4592379_+,NA|421aa|down_2|NZ_CP047135.1_4592844_4594107_-,NA|417aa|down_4|NZ_CP047135.1_4594847_4596098_-,NA|341aa|down_5|NZ_CP047135.1_4596094_4597117_-,NA|263aa|down_9|NZ_CP047135.1_4604448_4605237_-	NA|296aa|up_9|NZ_CP047135.1_4580832_4581720_-	NA	NA|432aa|up_8|NZ_CP047135.1_4581812_4583108_+	PRK09268, PRK09268, acetyl-CoA C-acetyltransferase	NA|457aa|up_7|NZ_CP047135.1_4583311_4584682_-	COG3071, HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|328aa|up_6|NZ_CP047135.1_4584678_4585662_-	pfam04375, HemX, HemX, putative uroporphyrinogen-III C-methyltransferase	NA|259aa|up_5|NZ_CP047135.1_4585770_4586547_-	PRK08811, PRK08811, uroporphyrinogen-III synthase; Validated	NA|157aa|up_4|NZ_CP047135.1_4586590_4587061_+	TIGR02447, conserved_hypothetical_protein, thioesterase domain, putative	NA|145aa|up_3|NZ_CP047135.1_4587091_4587526_+	NA	NA|146aa|up_2|NZ_CP047135.1_4587605_4588043_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|172aa|up_1|NZ_CP047135.1_4588147_4588663_+	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|342aa|up_0|NZ_CP047135.1_4588683_4589709_+	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|192aa|down_0|NZ_CP047135.1_4590039_4590615_-	TIGR04273, activator_of_XA21-mediated_immunity_Ax21, sulfation-dependent quorum factor, Ax21 family	NA|394aa|down_1|NZ_CP047135.1_4591197_4592379_+	NA	NA|421aa|down_2|NZ_CP047135.1_4592844_4594107_-	NA	NA|179aa|down_3|NZ_CP047135.1_4594261_4594798_-	pfam16473, DUF5051, 3' exoribonuclease, RNase T-like	NA|417aa|down_4|NZ_CP047135.1_4594847_4596098_-	NA	NA|341aa|down_5|NZ_CP047135.1_4596094_4597117_-	NA	NA|478aa|down_6|NZ_CP047135.1_4597106_4598540_-	pfam00665, rve, Integrase core domain	NA|181aa|down_7|NZ_CP047135.1_4600855_4601398_-	pfam13455, MUG113, Meiotically up-regulated gene 113	NA|746aa|down_8|NZ_CP047135.1_4601538_4603776_-	pfam04471, Mrr_cat, Restriction endonuclease	NA|263aa|down_9|NZ_CP047135.1_4604448_4605237_-	NA
