assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009831435.1_ASM983143v1	NZ_CP029150	Glaesserella parasuis strain GZ20170512 chromosome, complete genome	1	405763-405912	1	PILER-CR	no		PD-DExK,cas2,cas3,DEDDh,WYL,DinG	Orphan	TCACCCTTAGGTCCCGTTGGACCCGCAGGGCCT	33	2	5	405796-405825|405796-405825|405796-405825|405859-405888|405859-405888	NZ_CP029150.1_695599-695628|NZ_CP029150.1_917153-917124|NZ_CP029150.1_1433770-1433741|NZ_CP029150.1_1433707-1433678|NZ_CP029150.1_2088371-2088400	NA	2	2	Orphan	PD-DExK,cas2,cas3,DEDDh,WYL,DinG	NA,NA	NA|79aa|up_9|NZ_CP029150.1_395195_395432_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|57aa|up_8|NZ_CP029150.1_395443_395614_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|307aa|up_7|NZ_CP029150.1_395718_396639_+	pfam00593, TonB_dep_Rec, TonB dependent receptor	NA|122aa|up_6|NZ_CP029150.1_396807_397173_+	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown]	NA|224aa|up_5|NZ_CP029150.1_397233_397905_+	PRK10336, PRK10336, two-component system response regulator QseB	NA|467aa|up_4|NZ_CP029150.1_397891_399292_+	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|96aa|up_3|NZ_CP029150.1_399683_399971_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|548aa|up_2|NZ_CP029150.1_400081_401725_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|351aa|up_1|NZ_CP029150.1_401891_402944_+	PRK11720, PRK11720, UDP-glucose--hexose-1-phosphate uridylyltransferase	NA|61aa|up_0|NZ_CP029150.1_404174_404357_+	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|114aa|down_0|NZ_CP029150.1_408720_409062_-	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional	NA|392aa|down_1|NZ_CP029150.1_409172_410348_-	PRK12298, obgE, GTPase CgtA; Reviewed	NA|307aa|down_2|NZ_CP029150.1_410384_411305_-	pfam00892, EamA, EamA-like transporter family	NA|310aa|down_3|NZ_CP029150.1_411306_412236_-	pfam00892, EamA, EamA-like transporter family	NA|86aa|down_4|NZ_CP029150.1_412313_412571_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|104aa|down_5|NZ_CP029150.1_412591_412903_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|384aa|down_6|NZ_CP029150.1_413100_414252_-	PRK11170, nagA, N-acetylglucosamine-6-phosphate deacetylase; Provisional	NA|265aa|down_7|NZ_CP029150.1_414261_415056_-	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional	NA|275aa|down_8|NZ_CP029150.1_415454_416279_-	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|441aa|down_9|NZ_CP029150.1_416431_417754_+	PRK09412, PRK09412, anaerobic C4-dicarboxylate transporter; Reviewed
GCF_009831435.1_ASM983143v1	NZ_CP029150	Glaesserella parasuis strain GZ20170512 chromosome, complete genome	2	695694-695994	1	CRISPRCasFinder	no		PD-DExK,cas2,cas3,DEDDh,WYL,DinG	Orphan	ACCCGCAGGACCTTGAGGGCCCATTGGTCCT	31	2	2	695725-695792|695914-695963	NZ_CP029150.1_2088200-2088267|NZ_CP029150.1_1091422-1091373	NA	3	3	Orphan	PD-DExK,cas2,cas3,DEDDh,WYL,DinG	NA,NA|70aa|down_3|NZ_CP029150.1_698199_698409_+	NA|105aa|up_9|NZ_CP029150.1_682074_682389_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|271aa|up_8|NZ_CP029150.1_682756_683569_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|140aa|up_7|NZ_CP029150.1_683772_684192_-	PRK10254, PRK10254, proofreading thioesterase EntH	NA|1031aa|up_6|NZ_CP029150.1_684523_687616_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|368aa|up_5|NZ_CP029150.1_688020_689124_+	PRK10808, PRK10808, outer membrane protein A; Reviewed	NA|132aa|up_4|NZ_CP029150.1_689205_689601_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|340aa|up_3|NZ_CP029150.1_689830_690850_+	PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase	NA|111aa|up_2|NZ_CP029150.1_690941_691274_-	cd01191, INT_C_like_2, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|889aa|up_1|NZ_CP029150.1_691795_694462_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|66aa|up_0|NZ_CP029150.1_694802_695000_-	COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]	NA|88aa|down_0|NZ_CP029150.1_696363_696627_-	pfam05662, YadA_stalk, Coiled stalk of trimeric autotransporter adhesin	NA|236aa|down_1|NZ_CP029150.1_696610_697318_-	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll	NA|58aa|down_2|NZ_CP029150.1_697784_697958_-	pfam13018, ESPR, Extended Signal Peptide of Type V secretion system	NA|70aa|down_3|NZ_CP029150.1_698199_698409_+	NA	NA|595aa|down_4|NZ_CP029150.1_698777_700562_+	PRK09231, PRK09231, fumarate reductase flavoprotein subunit; Validated	NA|257aa|down_5|NZ_CP029150.1_700568_701339_+	PRK12385, PRK12385, succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA|131aa|down_6|NZ_CP029150.1_701353_701746_+	PRK04987, PRK04987, fumarate reductase subunit FrdC	NA|115aa|down_7|NZ_CP029150.1_701756_702101_+	PRK05470, PRK05470, fumarate reductase subunit FrdD	NA|252aa|down_8|NZ_CP029150.1_702419_703175_-	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated	NA|273aa|down_9|NZ_CP029150.1_703283_704102_+	PRK01741, PRK01741, cell division protein ZipA; Provisional
GCF_009831435.1_ASM983143v1	NZ_CP029150	Glaesserella parasuis strain GZ20170512 chromosome, complete genome	3	1023647-1023867	2	CRISPRCasFinder	no	WYL	PD-DExK,cas2,cas3,DEDDh,WYL,DinG	Unclear	CTTCATTTCTTCTGTTGGATTTT	23	0	0	NA	NA	NA	3	3	Orphan	PD-DExK,cas2,cas3,DEDDh,WYL,DinG	NA|73aa|up_6|NZ_CP029150.1_1018553_1018772_-,NA|124aa|up_5|NZ_CP029150.1_1018824_1019196_-,NA|129aa|up_1|NZ_CP029150.1_1022259_1022646_-,NA|113aa|down_0|NZ_CP029150.1_1023947_1024286_-	NA|524aa|up_9|NZ_CP029150.1_1015781_1017353_+	PRK00074, guaA, GMP synthase; Reviewed	NA|157aa|up_8|NZ_CP029150.1_1017487_1017958_+	pfam13356, Arm-DNA-bind_3, Arm DNA-binding domain	NA|61aa|up_7|NZ_CP029150.1_1018247_1018430_-	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|73aa|up_6|NZ_CP029150.1_1018553_1018772_-	NA	NA|124aa|up_5|NZ_CP029150.1_1018824_1019196_-	NA	NA|86aa|up_4|NZ_CP029150.1_1019220_1019478_-	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain	NA|549aa|up_3|NZ_CP029150.1_1019474_1021121_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|359aa|up_2|NZ_CP029150.1_1021167_1022244_-	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|129aa|up_1|NZ_CP029150.1_1022259_1022646_-	NA	NA|238aa|up_0|NZ_CP029150.1_1022672_1023386_-	COG4735, COG4735, Uncharacterized protein conserved in bacteria [Function unknown]	NA|113aa|down_0|NZ_CP029150.1_1023947_1024286_-	NA	WYL|296aa|down_1|NZ_CP029150.1_1024294_1025182_-	pfam13280, WYL, WYL domain	NA|115aa|down_2|NZ_CP029150.1_1025399_1025744_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|268aa|down_3|NZ_CP029150.1_1025784_1026588_-	PRK11756, PRK11756, exonuclease III; Provisional	NA|459aa|down_4|NZ_CP029150.1_1026707_1028084_-	COG2056, COG2056, Predicted permease [General function prediction only]	NA|317aa|down_5|NZ_CP029150.1_1028393_1029344_-	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|189aa|down_6|NZ_CP029150.1_1029582_1030149_+	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism]	NA|146aa|down_7|NZ_CP029150.1_1030149_1030587_+	PRK03467, PRK03467, hypothetical protein; Provisional	NA|953aa|down_8|NZ_CP029150.1_1030748_1033607_+	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|280aa|down_9|NZ_CP029150.1_1033623_1034463_+	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional
GCF_009831435.1_ASM983143v1	NZ_CP029150	Glaesserella parasuis strain GZ20170512 chromosome, complete genome	4	1288681-1288802	3	CRISPRCasFinder	no		PD-DExK,cas2,cas3,DEDDh,WYL,DinG	Orphan	TTCATCATATGATCTTTTTTCAT	23	0	0	NA	NA	NA	2	2	Orphan	PD-DExK,cas2,cas3,DEDDh,WYL,DinG	NA,NA|173aa|down_9|NZ_CP029150.1_1294491_1295010_+	NA|48aa|up_9|NZ_CP029150.1_1278536_1278680_-	pfam13018, ESPR, Extended Signal Peptide of Type V secretion system	NA|199aa|up_8|NZ_CP029150.1_1279515_1280112_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|341aa|up_7|NZ_CP029150.1_1280122_1281145_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|315aa|up_6|NZ_CP029150.1_1281258_1282203_-	PRK11805, PRK11805, 50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA|177aa|up_5|NZ_CP029150.1_1282289_1282820_+	PRK04946, PRK04946, endonuclease SmrB	NA|406aa|up_4|NZ_CP029150.1_1282961_1284179_-	TIGR00837, Tyrosine-specific_transport_protein, aromatic amino acid transport protein	NA|405aa|up_3|NZ_CP029150.1_1284327_1285542_-	PRK15132, PRK15132, tyrosine transporter TyrP; Provisional	NA|160aa|up_2|NZ_CP029150.1_1286326_1286806_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|217aa|up_1|NZ_CP029150.1_1286823_1287474_-	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region	NA|357aa|up_0|NZ_CP029150.1_1287475_1288546_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|191aa|down_0|NZ_CP029150.1_1289120_1289693_+	PRK12530, PRK12530, RNA polymerase sigma factor; Provisional	NA|62aa|down_1|NZ_CP029150.1_1289689_1289875_+	pfam13490, zf-HC2, Putative zinc-finger	NA|99aa|down_2|NZ_CP029150.1_1291028_1291325_-	PHA02535, P, terminase ATPase subunit; Provisional	NA|272aa|down_3|NZ_CP029150.1_1291492_1292308_+	pfam05929, Phage_GPO, Phage capsid scaffolding protein (GPO) serine peptidase	NA|68aa|down_4|NZ_CP029150.1_1292320_1292524_+	pfam05125, Phage_cap_P2, Phage major capsid protein, P2 family	NA|218aa|down_5|NZ_CP029150.1_1292523_1293177_+	PHA02537, M, terminase endonuclease subunit; Provisional	NA|46aa|down_6|NZ_CP029150.1_1293211_1293349_+	pfam16080, Phage_holin_2_3, Bacteriophage holin family HP1	NA|175aa|down_7|NZ_CP029150.1_1293332_1293857_+	cd16901, lyz_P1, P1 lysozyme Lyz-like proteins	NA|156aa|down_8|NZ_CP029150.1_1293841_1294309_+	TIGR03495, Probable_spanin_inner_membrane_subunit, phage lysis regulatory protein, LysB family	NA|173aa|down_9|NZ_CP029150.1_1294491_1295010_+	NA
GCF_009831435.1_ASM983143v1	NZ_CP029150	Glaesserella parasuis strain GZ20170512 chromosome, complete genome	5	1339417-1339505	4	CRISPRCasFinder	no		PD-DExK,cas2,cas3,DEDDh,WYL,DinG	Orphan	TTAACATTCCCCCTTTGAAAAAG	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,cas2,cas3,DEDDh,WYL,DinG	NA,NA	NA|96aa|up_9|NZ_CP029150.1_1325007_1325295_-	PRK05943, PRK05943, 50S ribosomal protein L25; Reviewed	NA|838aa|up_8|NZ_CP029150.1_1325576_1328090_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|208aa|up_7|NZ_CP029150.1_1328308_1328932_+	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|936aa|up_6|NZ_CP029150.1_1329178_1331986_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|406aa|up_5|NZ_CP029150.1_1332124_1333342_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|389aa|up_4|NZ_CP029150.1_1333406_1334573_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|291aa|up_3|NZ_CP029150.1_1334572_1335445_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|617aa|up_2|NZ_CP029150.1_1335605_1337456_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|435aa|up_1|NZ_CP029150.1_1337650_1338955_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|120aa|up_0|NZ_CP029150.1_1339031_1339391_-	COG2852, COG2852, Very-short-patch-repair endonuclease [Replication, recombination,    and repair]	NA|159aa|down_0|NZ_CP029150.1_1339524_1340001_-	PRK05422, smpB, SsrA-binding protein SmpB	NA|469aa|down_1|NZ_CP029150.1_1340121_1341528_-	pfam04317, DUF463, YcjX-like family, DUF463	NA|400aa|down_2|NZ_CP029150.1_1341538_1342738_-	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	NA|348aa|down_3|NZ_CP029150.1_1342867_1343911_-	PRK00943, PRK00943, selenide, water dikinase SelD	NA|75aa|down_4|NZ_CP029150.1_1344013_1344238_-	pfam03889, DUF331, Domain of unknown function	NA|252aa|down_5|NZ_CP029150.1_1344445_1345201_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|355aa|down_6|NZ_CP029150.1_1345436_1346501_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|362aa|down_7|NZ_CP029150.1_1346602_1347688_+	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|307aa|down_8|NZ_CP029150.1_1347796_1348717_-	PRK03564, PRK03564, formate dehydrogenase accessory protein FdhE; Provisional	NA|647aa|down_9|NZ_CP029150.1_1348759_1350700_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]
