assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009831375.1_ASM983137v1	NZ_CP027002	[Ruminococcus] gnavus ATCC 29149 chromosome, complete genome	1	845821-845907	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas14j,cas3,RT,cas3HD,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	CTCGCCGGACGATCCTGACGGGAT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas14j,cas3,RT,cas3HD,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2	NA,NA	NA|261aa|up_9|NZ_CP027002.1_832938_833721_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|307aa|up_8|NZ_CP027002.1_833801_834722_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|442aa|up_7|NZ_CP027002.1_834810_836136_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|419aa|up_6|NZ_CP027002.1_836361_837618_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|357aa|up_5|NZ_CP027002.1_837614_838685_-	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators	NA|584aa|up_4|NZ_CP027002.1_838672_840424_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|300aa|up_3|NZ_CP027002.1_840432_841332_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|307aa|up_2|NZ_CP027002.1_841334_842255_-	PRK00130, truB, tRNA pseudouridine synthase B; Provisional	NA|320aa|up_1|NZ_CP027002.1_842276_843236_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|124aa|up_0|NZ_CP027002.1_843242_843614_-	pfam02033, RBFA, Ribosome-binding factor A	NA|108aa|down_0|NZ_CP027002.1_846207_846531_-	PRK07714, PRK07714, YlxQ family RNA-binding protein	NA|93aa|down_1|NZ_CP027002.1_846517_846796_-	pfam04296, DUF448, Protein of unknown function (DUF448)	NA|398aa|down_2|NZ_CP027002.1_846818_848012_-	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|156aa|down_3|NZ_CP027002.1_848031_848499_-	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|748aa|down_4|NZ_CP027002.1_848904_851148_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|641aa|down_5|NZ_CP027002.1_851177_853100_-	PRK05644, gyrB, DNA gyrase subunit B; Validated	NA|390aa|down_6|NZ_CP027002.1_853197_854367_-	pfam07454, SpoIIP, Stage II sporulation protein P (SpoIIP)	NA|326aa|down_7|NZ_CP027002.1_854436_855414_-	PRK12362, PRK12362, germination protease; Provisional	NA|88aa|down_8|NZ_CP027002.1_855603_855867_+	pfam01649, Ribosomal_S20p, Ribosomal protein S20	NA|214aa|down_9|NZ_CP027002.1_855956_856598_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated
GCF_009831375.1_ASM983137v1	NZ_CP027002	[Ruminococcus] gnavus ATCC 29149 chromosome, complete genome	2	1446641-1446730	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas14j,cas3,RT,cas3HD,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	TCTGCTGCGTCCTCTGCTTTTTCC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas14j,cas3,RT,cas3HD,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2	NA|141aa|up_5|NZ_CP027002.1_1442335_1442758_-,NA	NA|174aa|up_9|NZ_CP027002.1_1436373_1436895_+	pfam04892, VanZ, VanZ like family	NA|337aa|up_8|NZ_CP027002.1_1436835_1437846_-	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only]	NA|412aa|up_7|NZ_CP027002.1_1437846_1439082_-	cd03586, PolY_Pol_IV_kappa, DNA Polymerase IV/Kappa	NA|866aa|up_6|NZ_CP027002.1_1439078_1441676_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|141aa|up_5|NZ_CP027002.1_1442335_1442758_-	NA	NA|200aa|up_4|NZ_CP027002.1_1442816_1443416_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|410aa|up_3|NZ_CP027002.1_1443543_1444773_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT	NA|141aa|up_2|NZ_CP027002.1_1444848_1445271_-	TIGR02481, hemeryth_dom, hemerythrin-like metal-binding domain	NA|279aa|up_1|NZ_CP027002.1_1445282_1446119_-	PRK00241, nudC, NAD(+) diphosphatase	NA|161aa|up_0|NZ_CP027002.1_1446120_1446603_-	pfam01252, Peptidase_A8, Signal peptidase (SPase) II	NA|569aa|down_0|NZ_CP027002.1_1447397_1449104_+	cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins	NA|418aa|down_1|NZ_CP027002.1_1449139_1450393_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|479aa|down_2|NZ_CP027002.1_1450560_1451997_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|656aa|down_3|NZ_CP027002.1_1452095_1454063_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|253aa|down_4|NZ_CP027002.1_1454083_1454842_-	PRK10475, PRK10475, 23S rRNA pseudouridine(2604) synthase RluF	NA|387aa|down_5|NZ_CP027002.1_1454834_1455995_-	cd14439, AlgX_N_like, N-terminal catalytic domain of putative alginate O-acetyltranferase and similar proteins	NA|471aa|down_6|NZ_CP027002.1_1456003_1457416_-	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]	NA|164aa|down_7|NZ_CP027002.1_1457436_1457928_-	pfam14270, DUF4358, Domain of unknown function (DUF4358)	NA|253aa|down_8|NZ_CP027002.1_1457924_1458683_-	cd01841, NnaC_like, NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases	NA|223aa|down_9|NZ_CP027002.1_1458751_1459420_-	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]
GCF_009831375.1_ASM983137v1	NZ_CP027002	[Ruminococcus] gnavus ATCC 29149 chromosome, complete genome	3	3334796-3336684	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DEDDh,DinG,csa3,cas14j,cas3,RT,cas3HD,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2	 Type I-U?,Type I-C,Type I-U	GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT,GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT,GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT	32,32,32	4	4	3334828-3334865|3335693-3335727|3335760-3335796|3336354-3336386	NZ_CP027002.1_3277277-3277240|NZ_CP027002.1_3271542-3271508|NZ_CP027002.1_3281730-3281766|NZ_CP027002.1_3289060-3289092	I-C:I-C:I-C	27,28,28	28	TypeI-U?,TypeI-C,TypeI-U	DEDDh,DinG,csa3,cas14j,cas3,RT,cas3HD,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2	NA|147aa|up_6|NZ_CP027002.1_3328833_3329274_+,NA|62aa|down_5|NZ_CP027002.1_3342938_3343124_-,NA|61aa|down_6|NZ_CP027002.1_3343825_3344008_+,NA|519aa|down_7|NZ_CP027002.1_3344080_3345637_+	NA|563aa|up_9|NZ_CP027002.1_3323670_3325359_+	smart00857, Resolvase, Resolvase, N terminal domain	cas3|722aa|up_8|NZ_CP027002.1_3325882_3328048_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|156aa|up_7|NZ_CP027002.1_3328382_3328850_+	pfam13151, DUF3990, Protein of unknown function (DUF3990)	NA|147aa|up_6|NZ_CP027002.1_3328833_3329274_+	NA	cas5|221aa|up_5|NZ_CP027002.1_3329299_3329962_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|585aa|up_4|NZ_CP027002.1_3329958_3331713_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|304aa|up_3|NZ_CP027002.1_3331713_3332625_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|221aa|up_2|NZ_CP027002.1_3332624_3333287_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|344aa|up_1|NZ_CP027002.1_3333286_3334318_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP027002.1_3334330_3334621_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|92aa|down_0|NZ_CP027002.1_3336687_3336963_+	pfam17202, sCache_3_3, Single cache domain 3	NA|111aa|down_1|NZ_CP027002.1_3336949_3337282_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|313aa|down_2|NZ_CP027002.1_3338180_3339119_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|169aa|down_3|NZ_CP027002.1_3339161_3339668_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|415aa|down_4|NZ_CP027002.1_3341632_3342877_-	pfam00665, rve, Integrase core domain	NA|62aa|down_5|NZ_CP027002.1_3342938_3343124_-	NA	NA|61aa|down_6|NZ_CP027002.1_3343825_3344008_+	NA	NA|519aa|down_7|NZ_CP027002.1_3344080_3345637_+	NA	NA|386aa|down_8|NZ_CP027002.1_3345772_3346930_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|297aa|down_9|NZ_CP027002.1_3347096_3347987_+	COG0348, NapH, Polyferredoxin [Energy production and conversion]
